RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PET117Q6UWS5 81 aa6.05□□□□□ -1.44
CDCA3-208ENST00000540683 TIMM17BO60830 172 aa6.04□□□□□ -1.44
CDCA3-208ENST00000540683 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
CDCA3-208ENST00000540683 Q6ZRX8 168 aa6.04□□□□□ -1.44
CDCA3-208ENST00000540683 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
CDCA3-208ENST00000540683 TRAV23DV6A0A075B6W5 121 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 A0A0J9YXY3 114 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
CDCA3-208ENST00000540683 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 SSBP3-AS1Q7Z2R9 100 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 LINC00518Q8N0U6 118 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
CDCA3-208ENST00000540683 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BKO60814 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BJP06899 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BOP23527 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BBP33778 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BDP58876 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BCP62807 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST2H2BEQ16778 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.02□□□□□ -1.45
CDCA3-208ENST00000540683 LINC01545Q5VT33 79 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 DAND5Q8N907 189 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BHQ93079 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BNQ99877 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 HIST1H2BMQ99879 126 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 PMCHL2Q9BQD1 86 aa6.02□□□□□ -1.45
CDCA3-208ENST00000540683 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
CDCA3-208ENST00000540683 GAGE2AQ6NT46 116 aa6.01□□□□□ -1.45
CDCA3-208ENST00000540683 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 ZNF815PA8K554 130 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 C3orf22Q8N5N4 141 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 Q8NBF4 154 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 OR13C6PQ8NH95 151 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
CDCA3-208ENST00000540683 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
CDCA3-208ENST00000540683 Q6ZVH6 145 aa5.99□□□□□ -1.45
CDCA3-208ENST00000540683 PPDPFQ9H3Y8 114 aa5.99□□□□□ -1.45
CDCA3-208ENST00000540683 SLC25A20O43772 301 aa5.98□□□□□ -1.45
CDCA3-208ENST00000540683 SNRPEP62304 92 aaKnown RBP5.98□□□□□ -1.45
CDCA3-208ENST00000540683 COA6Q5JTJ3 125 aaKnown RBP5.98□□□□□ -1.45
CDCA3-208ENST00000540683 IGLV9-49A0A0B4J1Y8 123 aa5.97□□□□□ -1.45
CDCA3-208ENST00000540683 IFITM1P13164 125 aa5.97□□□□□ -1.45
CDCA3-208ENST00000540683 KRTDAPP60985 99 aa5.97□□□□□ -1.45
CDCA3-208ENST00000540683 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
CDCA3-208ENST00000540683 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
CDCA3-208ENST00000540683 NPC2P61916 151 aa5.96□□□□□ -1.46
CDCA3-208ENST00000540683 MOBPQ13875 183 aa5.96□□□□□ -1.46
CDCA3-208ENST00000540683 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.46
CDCA3-208ENST00000540683 C9orf153Q5TBE3 101 aa5.96□□□□□ -1.46
CDCA3-208ENST00000540683 LPAP08519 4548 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 C3orf79P0CE67 100 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 Q9BRP9 147 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
CDCA3-208ENST00000540683 A4D1N5 150 aa5.94□□□□□ -1.46
CDCA3-208ENST00000540683 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
CDCA3-208ENST00000540683 HSBP1L1C9JCN9 74 aa5.93□□□□□ -1.46
CDCA3-208ENST00000540683 COX7BP24311 80 aa5.93□□□□□ -1.46
CDCA3-208ENST00000540683 LITAFQ99732 161 aa5.93□□□□□ -1.46
CDCA3-208ENST00000540683 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
CDCA3-208ENST00000540683 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
CDCA3-208ENST00000540683 ERC2-IT1O76042 136 aa5.92□□□□□ -1.46
CDCA3-208ENST00000540683 TRAV13-2A0A0B4J235 113 aa5.91□□□□□ -1.46
CDCA3-208ENST00000540683 S100A2P29034 98 aa5.91□□□□□ -1.46
CDCA3-208ENST00000540683 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
CDCA3-208ENST00000540683 SPRR1BP22528 89 aa5.9□□□□□ -1.46
CDCA3-208ENST00000540683 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
CDCA3-208ENST00000540683 VAMP3Q15836 100 aa5.9□□□□□ -1.46
CDCA3-208ENST00000540683 TAL2Q16559 108 aa5.9□□□□□ -1.46
CDCA3-208ENST00000540683 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
CDCA3-208ENST00000540683 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
CDCA3-208ENST00000540683 A6NDN8 102 aa5.89□□□□□ -1.47
CDCA3-208ENST00000540683 CD164Q04900 197 aa5.89□□□□□ -1.47
CDCA3-208ENST00000540683 Q8N377 158 aa5.89□□□□□ -1.47
CDCA3-208ENST00000540683 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
CDCA3-208ENST00000540683 S100A6P06703 90 aa5.88□□□□□ -1.47
CDCA3-208ENST00000540683 S100A1P23297 94 aa5.88□□□□□ -1.47
CDCA3-208ENST00000540683 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
CDCA3-208ENST00000540683 PRO1933Q9H354 126 aa5.87□□□□□ -1.47
CDCA3-208ENST00000540683 ST20-AS1Q8NBB2 130 aa5.86□□□□□ -1.47
CDCA3-208ENST00000540683 MUC2Q02817 5179 aa5.86□□□□□ -1.47
CDCA3-208ENST00000540683 ASB16-AS1Q495Z4 193 aa5.85□□□□□ -1.47
CDCA3-208ENST00000540683 F8WEM9 126 aa5.84□□□□□ -1.47
CDCA3-208ENST00000540683 H7C2G1 150 aa5.84□□□□□ -1.47
CDCA3-208ENST00000540683 SNCGO76070 127 aa5.84□□□□□ -1.47
CDCA3-208ENST00000540683 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
CDCA3-208ENST00000540683 TTTY13Q9BZ97 58 aa5.84□□□□□ -1.47
CDCA3-208ENST00000540683 ATOH7Q8N100 152 aa5.83□□□□□ -1.48
CDCA3-208ENST00000540683 DEFB105AQ8NG35 78 aa5.83□□□□□ -1.48
CDCA3-208ENST00000540683 PCP2Q8IVA1 136 aa5.82□□□□□ -1.48
CDCA3-208ENST00000540683 IGLV5-48A0A075B6I7 105 aa5.81□□□□□ -1.48
CDCA3-208ENST00000540683 TCL1BO95988 128 aa5.81□□□□□ -1.48
CDCA3-208ENST00000540683 Q5XG85 94 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms