RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 SS18L2Q9UHA2 77 aa2.63□□□□□ -1.99
SNHG1-205ENST00000537869 MXRA5Q9NR99 2828 aa2.63□□□□□ -1.99
SNHG1-205ENST00000537869 TEX49A0A1B0GTD5 131 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 A8MTW9 85 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 CCDC179H3BU77 68 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 TRACP01848 142 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 EMP1P54849 157 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 SNRPD3P62318 126 aaKnown RBP2.62□□□□□ -1.99
SNHG1-205ENST00000537869 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
SNHG1-205ENST00000537869 ZNF56Q15929 161 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 MEIG1Q5JSS6 88 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 ZCCHC13Q8WW36 166 aaKnown RBP2.62□□□□□ -1.99
SNHG1-205ENST00000537869 LINC00467Q9BRT7 94 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 NDUFA12Q9UI09 145 aa2.62□□□□□ -1.99
SNHG1-205ENST00000537869 CR1P17927 2039 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 ZNF469Q96JG9 3925 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-205ENST00000537869 TRAV12-3A0A0B4J271 114 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 H7C2G1 150 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 COX7A2LO14548 114 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 NDUFA1O15239 70 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 KRTAP21-3Q3LHN1 58 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 C5orf38Q86SI9 138 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 DAND5Q8N907 189 aa2.61□□□□□ -1.99
SNHG1-205ENST00000537869 SONP18583 2426 aaKnown RBP2.6□□□□□ -1.99
SNHG1-205ENST00000537869 IGHV3-73A0A0B4J1V6 119 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 A0A1B0GX51 115 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 UQCRQO14949 82 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 RPS28P62857 69 aaKnown RBP2.6□□□□□ -1.99
SNHG1-205ENST00000537869 FAM74A4Q5TZK3 123 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 LINC00526Q96FQ7 95 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 JMJD1CQ15652 2540 aa2.6□□□□□ -1.99
SNHG1-205ENST00000537869 F8P00451 2351 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 SVEP1Q4LDE5 3571 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 BAALC-AS2P0C853 105 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 PSMB8P28062 276 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 DEFB1P60022 68 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 SMIM20Q8N5G0 67 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 LINC00308Q8TCZ7 52 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 CLEC2BQ92478 149 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 UBE2D4Q9Y2X8 147 aa2.59□□□□□ -1.99
SNHG1-205ENST00000537869 FBN3Q75N90 2809 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 IGHV3-64A0A075B6Q5 118 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 H0YGX0 51 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 ATOX1O00244 68 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 COX7CP15954 63 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 RPL28P46779 137 aaKnown RBP2.58□□□□□ -2
SNHG1-205ENST00000537869 HIST1H4AP62805 103 aaKnown RBP2.58□□□□□ -2
SNHG1-205ENST00000537869 BPESC1Q9GZL8 116 aa2.58□□□□□ -2
SNHG1-205ENST00000537869 NSD1Q96L73 2696 aaPredicted RBP2.58□□□□□ -2
SNHG1-205ENST00000537869 ATRQ13535 2644 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 IGKV3-7A0A075B6H7 116 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 TRBV10-1A0A0K0K1A3 114 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 FAM236AA0A1B0GUQ0 79 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 FAM236BA0A1B0GV22 79 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 H3BUX3 64 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 CRYGAP11844 174 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 BLCAPP62952 87 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 SPINK13Q1W4C9 94 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 C9orf153Q5TBE3 101 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 C10orf105Q8TEF2 133 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 ZNF625Q96I27 306 aaPredicted RBP2.57□□□□□ -2
SNHG1-205ENST00000537869 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 CDKN2A-AS1Q9UH64 79 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 C22orf24Q9Y442 160 aa2.57□□□□□ -2
SNHG1-205ENST00000537869 FN1P02751 2386 aaKnown RBP2.56□□□□□ -2
SNHG1-205ENST00000537869 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 J3KT08 172 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 BCE1O60756 84 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 KRTAP5-9P26371 169 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 COX6A2Q02221 97 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 Q6JHZ5 121 aa2.56□□□□□ -2
SNHG1-205ENST00000537869 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.55□□□□□ -2
SNHG1-205ENST00000537869 IGKV2-29A2NJV5 120 aaPredicted RBP2.55□□□□□ -2
SNHG1-205ENST00000537869 B4DSR2 109 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 MSMBP08118 114 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 S100A7L2Q5SY68 101 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 SOSTDC1Q6X4U4 206 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 SMCR5Q8TEV8 140 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 DEFB104AQ8WTQ1 72 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 CDC42SE2Q9NRR3 84 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 KLK5Q9Y337 293 aaPredicted RBP2.55□□□□□ -2
SNHG1-205ENST00000537869 COL6A5A8TX70 2615 aa2.55□□□□□ -2
SNHG1-205ENST00000537869 FBN1P35555 2871 aaKnown RBP2.54□□□□□ -2
SNHG1-205ENST00000537869 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 IBA57-AS1B1ANH7 110 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 UBE2L6O14933 153 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 CRPP02741 224 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 LINC00694P0DN24 101 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 DEFB131AP59861 70 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 TMEM258P61165 79 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 NPC2P61916 151 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 ATP5EP2Q5VTU8 51 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 SERP2Q8N6R1 65 aa2.54□□□□□ -2
SNHG1-205ENST00000537869 OR13C6PQ8NH95 151 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms