RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
CCDC90B-212ENST00000529312 Q8NDZ9 215 aa4.54□□□□□ -1.68
CCDC90B-212ENST00000529312 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
CCDC90B-212ENST00000529312 TRBV10-3A0A0K0K1G6 114 aa4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 COLCA2A8K830 154 aa4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 NCR3O14931 201 aa4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 SPINK1P00995 79 aa4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 DDTP30046 118 aa4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 SPANXB1Q9NS25 103 aaPredicted RBP4.53□□□□□ -1.68
CCDC90B-212ENST00000529312 C5orf52A6NGY3 159 aa4.52□□□□□ -1.69
CCDC90B-212ENST00000529312 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
CCDC90B-212ENST00000529312 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
CCDC90B-212ENST00000529312 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 B5MCH6 92 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 KRTAP4-16G5E9R7 235 aaPredicted RBP4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 SLC7A5P1Q8MH63 180 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 PPDPFQ9H3Y8 114 aa4.51□□□□□ -1.69
CCDC90B-212ENST00000529312 E9PLD3 99 aa4.5□□□□□ -1.69
CCDC90B-212ENST00000529312 LINC00483Q53H64 154 aa4.5□□□□□ -1.69
CCDC90B-212ENST00000529312 DAND5Q8N907 189 aa4.5□□□□□ -1.69
CCDC90B-212ENST00000529312 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
CCDC90B-212ENST00000529312 PMCHL2Q9BQD1 86 aa4.5□□□□□ -1.69
CCDC90B-212ENST00000529312 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 TSPEAR-AS2P59090 65 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 Q6ZRX8 168 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 Q8NBF4 154 aa4.49□□□□□ -1.69
CCDC90B-212ENST00000529312 TRAV23DV6A0A075B6W5 121 aa4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 TIMM17BO60830 172 aa4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 AKR1D1P51857 326 aa4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 SLC25A34Q6PIV7 304 aa4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 COPS9Q8WXC6 57 aa4.48□□□□□ -1.69
CCDC90B-212ENST00000529312 SLC25A20O43772 301 aa4.47□□□□□ -1.69
CCDC90B-212ENST00000529312 ZNF73O43830 326 aaPredicted RBP4.47□□□□□ -1.69
CCDC90B-212ENST00000529312 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
CCDC90B-212ENST00000529312 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
CCDC90B-212ENST00000529312 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
CCDC90B-212ENST00000529312 LPAP08519 4548 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BKO60814 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 ERC2-IT1O76042 136 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BJP06899 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BOP23527 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BBP33778 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BDP58876 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BCP62807 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST2H2BEQ16778 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 LINC00308Q8TCZ7 52 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BHQ93079 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BNQ99877 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 HIST1H2BMQ99879 126 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
CCDC90B-212ENST00000529312 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
CCDC90B-212ENST00000529312 NPC2P61916 151 aa4.45□□□□□ -1.7
CCDC90B-212ENST00000529312 MOBPQ13875 183 aa4.45□□□□□ -1.7
CCDC90B-212ENST00000529312 Q9BRP9 147 aa4.45□□□□□ -1.7
CCDC90B-212ENST00000529312 SPANXDQ9BXN6 97 aa4.45□□□□□ -1.7
CCDC90B-212ENST00000529312 C20orf202A1L168 122 aa4.44□□□□□ -1.7
CCDC90B-212ENST00000529312 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
CCDC90B-212ENST00000529312 Q6ZVH6 145 aa4.44□□□□□ -1.7
CCDC90B-212ENST00000529312 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
CCDC90B-212ENST00000529312 IFITM1P13164 125 aa4.43□□□□□ -1.7
CCDC90B-212ENST00000529312 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
CCDC90B-212ENST00000529312 TAL2Q16559 108 aa4.43□□□□□ -1.7
CCDC90B-212ENST00000529312 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
CCDC90B-212ENST00000529312 TRBV7-6A0A0J9YX20 115 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 SPRR1BP22528 89 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 COX7BP24311 80 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 KRTDAPP60985 99 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 SNRPEP62304 92 aaKnown RBP4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 COA6Q5JTJ3 125 aaKnown RBP4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
CCDC90B-212ENST00000529312 Q8N377 158 aa4.41□□□□□ -1.7
CCDC90B-212ENST00000529312 LITAFQ99732 161 aa4.41□□□□□ -1.7
CCDC90B-212ENST00000529312 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.71
CCDC90B-212ENST00000529312 A4D1N5 150 aa4.4□□□□□ -1.71
CCDC90B-212ENST00000529312 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
CCDC90B-212ENST00000529312 ST20-AS1Q8NBB2 130 aa4.4□□□□□ -1.71
CCDC90B-212ENST00000529312 LIMD2Q9BT23 127 aa4.4□□□□□ -1.71
CCDC90B-212ENST00000529312 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 A6NDN8 102 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 CD164Q04900 197 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 VAMP3Q15836 100 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 C6orf99Q4VX62 202 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 PRO1933Q9H354 126 aa4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
CCDC90B-212ENST00000529312 TRAV13-2A0A0B4J235 113 aa4.38□□□□□ -1.71
CCDC90B-212ENST00000529312 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
CCDC90B-212ENST00000529312 HSBP1L1C9JCN9 74 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms