RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
CCDC90B-212ENST00000529312 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
CCDC90B-212ENST00000529312 NISCHQ9Y2I1 1504 aa19.04■□□□□ 0.64
CCDC90B-212ENST00000529312 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
CCDC90B-212ENST00000529312 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
CCDC90B-212ENST00000529312 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
CCDC90B-212ENST00000529312 ABCC9O60706 1549 aa16.91■□□□□ 0.3
CCDC90B-212ENST00000529312 FOXD1Q16676 465 aa16.71■□□□□ 0.27
CCDC90B-212ENST00000529312 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
CCDC90B-212ENST00000529312 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
CCDC90B-212ENST00000529312 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
CCDC90B-212ENST00000529312 NACADO15069 1562 aa16.1■□□□□ 0.17
CCDC90B-212ENST00000529312 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
CCDC90B-212ENST00000529312 MSH5O43196 834 aa15.91■□□□□ 0.14
CCDC90B-212ENST00000529312 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC90B-212ENST00000529312 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
CCDC90B-212ENST00000529312 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
CCDC90B-212ENST00000529312 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-212ENST00000529312 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
CCDC90B-212ENST00000529312 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
CCDC90B-212ENST00000529312 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
CCDC90B-212ENST00000529312 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-212ENST00000529312 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CCDC90B-212ENST00000529312 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
CCDC90B-212ENST00000529312 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
CCDC90B-212ENST00000529312 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-212ENST00000529312 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
CCDC90B-212ENST00000529312 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
CCDC90B-212ENST00000529312 ADRA2BP18089 450 aa15.05■□□□□ -0
CCDC90B-212ENST00000529312 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
CCDC90B-212ENST00000529312 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
CCDC90B-212ENST00000529312 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
CCDC90B-212ENST00000529312 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-212ENST00000529312 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
CCDC90B-212ENST00000529312 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
CCDC90B-212ENST00000529312 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-212ENST00000529312 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
CCDC90B-212ENST00000529312 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
CCDC90B-212ENST00000529312 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
CCDC90B-212ENST00000529312 CUX2O14529 1486 aa14.56□□□□□ -0.08
CCDC90B-212ENST00000529312 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
CCDC90B-212ENST00000529312 NESP48681 1621 aa14.52□□□□□ -0.09
CCDC90B-212ENST00000529312 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
CCDC90B-212ENST00000529312 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
CCDC90B-212ENST00000529312 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
CCDC90B-212ENST00000529312 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-212ENST00000529312 WIZO95785 1651 aa14.42□□□□□ -0.1
CCDC90B-212ENST00000529312 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
CCDC90B-212ENST00000529312 CFTRP13569 1480 aa14.28□□□□□ -0.12
CCDC90B-212ENST00000529312 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.12
CCDC90B-212ENST00000529312 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-212ENST00000529312 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
CCDC90B-212ENST00000529312 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
CCDC90B-212ENST00000529312 KIF21AQ7Z4S6 1674 aa14.24□□□□□ -0.13
CCDC90B-212ENST00000529312 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
CCDC90B-212ENST00000529312 WDR62O43379 1518 aa14.17□□□□□ -0.14
CCDC90B-212ENST00000529312 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
CCDC90B-212ENST00000529312 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
CCDC90B-212ENST00000529312 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
CCDC90B-212ENST00000529312 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
CCDC90B-212ENST00000529312 SUPT5HO00267 1087 aaKnown RBP14.02□□□□□ -0.17
CCDC90B-212ENST00000529312 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
CCDC90B-212ENST00000529312 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
CCDC90B-212ENST00000529312 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
CCDC90B-212ENST00000529312 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
CCDC90B-212ENST00000529312 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-212ENST00000529312 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
CCDC90B-212ENST00000529312 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
CCDC90B-212ENST00000529312 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-212ENST00000529312 SOGA1O94964 1423 aa13.88□□□□□ -0.19
CCDC90B-212ENST00000529312 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-212ENST00000529312 FBLN2P98095 1184 aa13.85□□□□□ -0.19
CCDC90B-212ENST00000529312 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC90B-212ENST00000529312 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-212ENST00000529312 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-212ENST00000529312 CHMP7Q8WUX9 453 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-212ENST00000529312 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
CCDC90B-212ENST00000529312 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-212ENST00000529312 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
CCDC90B-212ENST00000529312 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-212ENST00000529312 CUX1P39880 1505 aa13.72□□□□□ -0.21
CCDC90B-212ENST00000529312 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
CCDC90B-212ENST00000529312 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
CCDC90B-212ENST00000529312 GRIN2BQ13224 1484 aa13.69□□□□□ -0.22
CCDC90B-212ENST00000529312 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
CCDC90B-212ENST00000529312 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
CCDC90B-212ENST00000529312 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-212ENST00000529312 SNAPC4Q5SXM2 1469 aa13.64□□□□□ -0.23
CCDC90B-212ENST00000529312 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
CCDC90B-212ENST00000529312 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
CCDC90B-212ENST00000529312 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
CCDC90B-212ENST00000529312 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
CCDC90B-212ENST00000529312 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
CCDC90B-212ENST00000529312 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
CCDC90B-212ENST00000529312 CHD1O14646 1710 aa13.59□□□□□ -0.23
CCDC90B-212ENST00000529312 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
CCDC90B-212ENST00000529312 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
CCDC90B-212ENST00000529312 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-212ENST00000529312 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
CCDC90B-212ENST00000529312 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms