RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MRPL55Q7Z7F7 128 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-220ENST00000528402 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
ECHDC1-220ENST00000528402 SPRR1AP35321 89 aa9.5□□□□□ -0.89
ECHDC1-220ENST00000528402 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-220ENST00000528402 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
ECHDC1-220ENST00000528402 DSCR8Q96T75 97 aa9.48□□□□□ -0.89
ECHDC1-220ENST00000528402 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
ECHDC1-220ENST00000528402 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
ECHDC1-220ENST00000528402 DNAH1Q9P2D7 4330 aa9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 Q6ZRX8 168 aa9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
ECHDC1-220ENST00000528402 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
ECHDC1-220ENST00000528402 B5MCH6 92 aa9.45□□□□□ -0.9
ECHDC1-220ENST00000528402 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-220ENST00000528402 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-220ENST00000528402 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-220ENST00000528402 A0A096LNI7 61 aa9.44□□□□□ -0.9
ECHDC1-220ENST00000528402 Q6ZQT0 140 aa9.44□□□□□ -0.9
ECHDC1-220ENST00000528402 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
ECHDC1-220ENST00000528402 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
ECHDC1-220ENST00000528402 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
ECHDC1-220ENST00000528402 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
ECHDC1-220ENST00000528402 LINC00846Q9NV44 126 aa9.43□□□□□ -0.9
ECHDC1-220ENST00000528402 Q6JHZ5 121 aa9.42□□□□□ -0.9
ECHDC1-220ENST00000528402 A0A1B0GV72 72 aa9.41□□□□□ -0.9
ECHDC1-220ENST00000528402 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-220ENST00000528402 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.9
ECHDC1-220ENST00000528402 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.9
ECHDC1-220ENST00000528402 UBL5Q9BZL1 73 aa9.4□□□□□ -0.9
ECHDC1-220ENST00000528402 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
ECHDC1-220ENST00000528402 Q6ZR54 194 aa9.38□□□□□ -0.91
ECHDC1-220ENST00000528402 A0A1W2PNN7 141 aa9.37□□□□□ -0.91
ECHDC1-220ENST00000528402 IGLV5-48A0A075B6I7 105 aa9.36□□□□□ -0.91
ECHDC1-220ENST00000528402 A0A1B0GW54 56 aa9.36□□□□□ -0.91
ECHDC1-220ENST00000528402 Q9BRP9 147 aa9.36□□□□□ -0.91
ECHDC1-220ENST00000528402 UBE2BP63146 152 aa9.35□□□□□ -0.91
ECHDC1-220ENST00000528402 Q8N377 158 aa9.35□□□□□ -0.91
ECHDC1-220ENST00000528402 A0A087WTM6 91 aa9.34□□□□□ -0.91
ECHDC1-220ENST00000528402 H0Y9J4 135 aa9.34□□□□□ -0.91
ECHDC1-220ENST00000528402 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-220ENST00000528402 ANAPC13Q9BS18 74 aa9.34□□□□□ -0.91
ECHDC1-220ENST00000528402 M0R2N4 97 aa9.33□□□□□ -0.92
ECHDC1-220ENST00000528402 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
ECHDC1-220ENST00000528402 DNAH7Q8WXX0 4024 aa9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 C1orf134Q5TEV5 83 aa9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 FAM19A1Q7Z5A9 133 aa9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 WWC2-AS2Q96NR7 200 aa9.31□□□□□ -0.92
ECHDC1-220ENST00000528402 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
ECHDC1-220ENST00000528402 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
ECHDC1-220ENST00000528402 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-220ENST00000528402 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
ECHDC1-220ENST00000528402 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.92
ECHDC1-220ENST00000528402 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 CXCL6P80162 114 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 TNP2Q05952 138 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 Q6ZVQ6 151 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
ECHDC1-220ENST00000528402 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
ECHDC1-220ENST00000528402 F8WEM9 126 aa9.25□□□□□ -0.93
ECHDC1-220ENST00000528402 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
ECHDC1-220ENST00000528402 ST20-AS1Q8NBB2 130 aa9.25□□□□□ -0.93
ECHDC1-220ENST00000528402 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
ECHDC1-220ENST00000528402 RTL8CO15255 209 aa9.24□□□□□ -0.93
ECHDC1-220ENST00000528402 LY6G6CO95867 125 aa9.24□□□□□ -0.93
ECHDC1-220ENST00000528402 HIST1H4AP62805 103 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-220ENST00000528402 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-220ENST00000528402 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
ECHDC1-220ENST00000528402 ATOX1O00244 68 aa9.23□□□□□ -0.93
ECHDC1-220ENST00000528402 BCE1O60756 84 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 STARD9Q9P2P6 4700 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 SPRR1BP22528 89 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 UBE2AP49459 152 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 HAMPP81172 84 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 PRLHP81277 87 aa9.22□□□□□ -0.93
ECHDC1-220ENST00000528402 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
ECHDC1-220ENST00000528402 NREPQ16612 68 aa9.21□□□□□ -0.94
ECHDC1-220ENST00000528402 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
ECHDC1-220ENST00000528402 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.94
ECHDC1-220ENST00000528402 TENM2Q9NT68 2774 aa9.2□□□□□ -0.94
ECHDC1-220ENST00000528402 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 IGLV5-52A0A0A0MRZ9 124 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 Q8NBF4 154 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 LYSTQ99698 3801 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
ECHDC1-220ENST00000528402 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
ECHDC1-220ENST00000528402 DNHD1Q96M86 4753 aa9.18□□□□□ -0.94
ECHDC1-220ENST00000528402 PANO1I0J062 215 aa9.17□□□□□ -0.94
ECHDC1-220ENST00000528402 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
ECHDC1-220ENST00000528402 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
ECHDC1-220ENST00000528402 A0A1W2PNM2 257 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms