RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 A0A087WVE0 104 aa8.99□□□□□ -0.97
LDLRAD3-202ENST00000524419 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
LDLRAD3-202ENST00000524419 CRYGAP11844 174 aa8.98□□□□□ -0.97
LDLRAD3-202ENST00000524419 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
LDLRAD3-202ENST00000524419 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
LDLRAD3-202ENST00000524419 SERP2Q8N6R1 65 aa8.97□□□□□ -0.97
LDLRAD3-202ENST00000524419 B9D2Q9BPU9 175 aa8.97□□□□□ -0.97
LDLRAD3-202ENST00000524419 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
LDLRAD3-202ENST00000524419 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
LDLRAD3-202ENST00000524419 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
LDLRAD3-202ENST00000524419 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
LDLRAD3-202ENST00000524419 DNAH9Q9NYC9 4486 aa8.94□□□□□ -0.98
LDLRAD3-202ENST00000524419 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
LDLRAD3-202ENST00000524419 C7orf33Q8WU49 177 aa8.93□□□□□ -0.98
LDLRAD3-202ENST00000524419 TRBV7-4A0A0J9YYF1 115 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 APLNQ9ULZ1 77 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 M0R2N4 97 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
LDLRAD3-202ENST00000524419 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
LDLRAD3-202ENST00000524419 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.98
LDLRAD3-202ENST00000524419 Q6ZVQ6 151 aa8.9□□□□□ -0.98
LDLRAD3-202ENST00000524419 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
LDLRAD3-202ENST00000524419 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.99
LDLRAD3-202ENST00000524419 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
LDLRAD3-202ENST00000524419 BCE1O60756 84 aa8.89□□□□□ -0.99
LDLRAD3-202ENST00000524419 PRYO14603 147 aa8.88□□□□□ -0.99
LDLRAD3-202ENST00000524419 PSCAO43653 123 aa8.88□□□□□ -0.99
LDLRAD3-202ENST00000524419 CXCL6P80162 114 aa8.88□□□□□ -0.99
LDLRAD3-202ENST00000524419 HAMPP81172 84 aa8.86□□□□□ -0.99
LDLRAD3-202ENST00000524419 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
LDLRAD3-202ENST00000524419 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
LDLRAD3-202ENST00000524419 RPL37AP8A6NKH3 93 aa8.86□□□□□ -0.99
LDLRAD3-202ENST00000524419 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
LDLRAD3-202ENST00000524419 TGP01266 2768 aa8.85□□□□□ -0.99
LDLRAD3-202ENST00000524419 CNBPP62633 177 aaKnown RBP8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
LDLRAD3-202ENST00000524419 TMEM258P61165 79 aa8.83□□□□□ -1
LDLRAD3-202ENST00000524419 Q6ZRX8 168 aa8.83□□□□□ -1
LDLRAD3-202ENST00000524419 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
LDLRAD3-202ENST00000524419 SPRR1AP35321 89 aa8.82□□□□□ -1
LDLRAD3-202ENST00000524419 KRTAP4-16G5E9R7 235 aaPredicted RBP8.81□□□□□ -1
LDLRAD3-202ENST00000524419 LYSTQ99698 3801 aa8.81□□□□□ -1
LDLRAD3-202ENST00000524419 A0A096LNI7 61 aa8.8□□□□□ -1
LDLRAD3-202ENST00000524419 C16orf90A8MZG2 172 aa8.8□□□□□ -1
LDLRAD3-202ENST00000524419 DNAH10Q8IVF4 4471 aa8.8□□□□□ -1
LDLRAD3-202ENST00000524419 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
LDLRAD3-202ENST00000524419 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
LDLRAD3-202ENST00000524419 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
LDLRAD3-202ENST00000524419 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
LDLRAD3-202ENST00000524419 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
LDLRAD3-202ENST00000524419 SVIPQ8NHG7 77 aa8.79□□□□□ -1
LDLRAD3-202ENST00000524419 Q9BRP9 147 aa8.79□□□□□ -1
LDLRAD3-202ENST00000524419 J3KT08 172 aa8.78□□□□□ -1
LDLRAD3-202ENST00000524419 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1
LDLRAD3-202ENST00000524419 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1
LDLRAD3-202ENST00000524419 REG3GQ6UW15 175 aa8.77□□□□□ -1
LDLRAD3-202ENST00000524419 Q8N377 158 aa8.77□□□□□ -1
LDLRAD3-202ENST00000524419 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
LDLRAD3-202ENST00000524419 IGLV5-48A0A075B6I7 105 aa8.76□□□□□ -1.01
LDLRAD3-202ENST00000524419 PLECQ15149 4684 aaKnown RBP8.76□□□□□ -1.01
LDLRAD3-202ENST00000524419 TENM2Q9NT68 2774 aa8.76□□□□□ -1.01
LDLRAD3-202ENST00000524419 UBE2BP63146 152 aa8.75□□□□□ -1.01
LDLRAD3-202ENST00000524419 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
LDLRAD3-202ENST00000524419 A0A1B0GW54 56 aa8.74□□□□□ -1.01
LDLRAD3-202ENST00000524419 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
LDLRAD3-202ENST00000524419 NREPQ16612 68 aa8.73□□□□□ -1.01
LDLRAD3-202ENST00000524419 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
LDLRAD3-202ENST00000524419 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
LDLRAD3-202ENST00000524419 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
LDLRAD3-202ENST00000524419 DPH3Q96FX2 82 aa8.73□□□□□ -1.01
LDLRAD3-202ENST00000524419 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
LDLRAD3-202ENST00000524419 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
LDLRAD3-202ENST00000524419 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
LDLRAD3-202ENST00000524419 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
LDLRAD3-202ENST00000524419 C9orf163Q8N9P6 203 aa8.7□□□□□ -1.02
LDLRAD3-202ENST00000524419 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
LDLRAD3-202ENST00000524419 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
LDLRAD3-202ENST00000524419 TNP2Q05952 138 aa8.69□□□□□ -1.02
LDLRAD3-202ENST00000524419 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
LDLRAD3-202ENST00000524419 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
LDLRAD3-202ENST00000524419 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
LDLRAD3-202ENST00000524419 BPY2O14599 106 aa8.68□□□□□ -1.02
LDLRAD3-202ENST00000524419 STARD9Q9P2P6 4700 aa8.67□□□□□ -1.02
LDLRAD3-202ENST00000524419 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
LDLRAD3-202ENST00000524419 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
LDLRAD3-202ENST00000524419 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
LDLRAD3-202ENST00000524419 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
LDLRAD3-202ENST00000524419 PRLHP81277 87 aa8.66□□□□□ -1.02
LDLRAD3-202ENST00000524419 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
LDLRAD3-202ENST00000524419 H7BZZ5 65 aa8.65□□□□□ -1.02
LDLRAD3-202ENST00000524419 Q8NBF4 154 aa8.64□□□□□ -1.03
LDLRAD3-202ENST00000524419 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
LDLRAD3-202ENST00000524419 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms