RNA–Protein interactions for RNA: ENST00000519506.1

LINC01609-201, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 3 BASIC

Gene LINC01609, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-201ENST00000519506 CHD8Q9HCK8 2581 aa-0.18□□□□□ -2.44
LINC01609-201ENST00000519506 EP300Q09472 2414 aaPredicted RBP-0.18□□□□□ -2.44
LINC01609-201ENST00000519506 UACAQ9BZF9 1416 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 MAP3K4Q9Y6R4 1608 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 NDUFA3O95167 84 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 RABAC1Q9UI14 185 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 SETXQ7Z333 2677 aaKnown RBP-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 DOT1LQ8TEK3 1739 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 USH2AO75445 5202 aa-0.19□□□□□ -2.44
LINC01609-201ENST00000519506 REV3LO60673 3130 aa-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 RNF213Q63HN8 5207 aa-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 PRKDCP78527 4128 aaKnown RBP-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 LRRC9Q6ZRR7 1453 aa-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 DEFB135Q30KP9 77 aa-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 LRP2P98164 4655 aa-0.2□□□□□ -2.44
LINC01609-201ENST00000519506 NCOA2Q15596 1464 aa-0.21□□□□□ -2.44
LINC01609-201ENST00000519506 HYDINQ4G0P3 5121 aa-0.21□□□□□ -2.44
LINC01609-201ENST00000519506 HECTD4Q9Y4D8 3996 aa-0.21□□□□□ -2.44
LINC01609-201ENST00000519506 UBR4Q5T4S7 5183 aa-0.21□□□□□ -2.44
LINC01609-201ENST00000519506 NSD1Q96L73 2696 aaPredicted RBP-0.22□□□□□ -2.44
LINC01609-201ENST00000519506 ACYP1P07311 99 aa-0.22□□□□□ -2.44
LINC01609-201ENST00000519506 RYR1P21817 5038 aa-0.22□□□□□ -2.44
LINC01609-201ENST00000519506 RB1CC1Q8TDY2 1594 aa-0.23□□□□□ -2.45
LINC01609-201ENST00000519506 MED14O60244 1454 aa-0.23□□□□□ -2.45
LINC01609-201ENST00000519506 EPPK1P58107 5090 aaKnown RBP-0.23□□□□□ -2.45
LINC01609-201ENST00000519506 DIP2BQ9P265 1576 aa-0.23□□□□□ -2.45
LINC01609-201ENST00000519506 STAB1Q9NY15 2570 aa-0.24□□□□□ -2.45
LINC01609-201ENST00000519506 KANTRA0A1W2PQU2 76 aa-0.24□□□□□ -2.45
LINC01609-201ENST00000519506 RPL38P63173 70 aaKnown RBP-0.24□□□□□ -2.45
LINC01609-201ENST00000519506 C4AP0C0L4 1744 aa-0.24□□□□□ -2.45
LINC01609-201ENST00000519506 C4BP0C0L5 1744 aa-0.24□□□□□ -2.45
LINC01609-201ENST00000519506 APC2O95996 2303 aa-0.25□□□□□ -2.45
LINC01609-201ENST00000519506 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
LINC01609-201ENST00000519506 ST20Q9HBF5 79 aa-0.25□□□□□ -2.45
LINC01609-201ENST00000519506 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.25□□□□□ -2.45
LINC01609-201ENST00000519506 KIAA1109Q2LD37 5005 aa-0.26□□□□□ -2.45
LINC01609-201ENST00000519506 FLNAP21333 2647 aaKnown RBP-0.26□□□□□ -2.45
LINC01609-201ENST00000519506 ADIRFQ15847 76 aa-0.27□□□□□ -2.45
LINC01609-201ENST00000519506 RYR2Q92736 4967 aa-0.27□□□□□ -2.45
LINC01609-201ENST00000519506 FAT1Q14517 4588 aa-0.27□□□□□ -2.45
LINC01609-201ENST00000519506 PIK3C2BO00750 1634 aa-0.27□□□□□ -2.45
LINC01609-201ENST00000519506 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 KNL1Q8NG31 2342 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 HERC1Q15751 4861 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 H3BUT2 72 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 IFI6P09912 130 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 TENM2Q9NT68 2774 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 TIAM2Q8IVF5 1701 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 COL6A3P12111 3177 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 DOPEY1Q5JWR5 2465 aa-0.28□□□□□ -2.45
LINC01609-201ENST00000519506 RGPD8O14715 1765 aaPredicted RBP-0.29□□□□□ -2.46
LINC01609-201ENST00000519506 RGPD5Q99666 1765 aa-0.29□□□□□ -2.46
LINC01609-201ENST00000519506 S100A13Q99584 98 aa-0.29□□□□□ -2.46
LINC01609-201ENST00000519506 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.29□□□□□ -2.46
LINC01609-201ENST00000519506 URB2Q14146 1524 aaKnown RBP-0.29□□□□□ -2.46
LINC01609-201ENST00000519506 HERC2O95714 4834 aa-0.3□□□□□ -2.46
LINC01609-201ENST00000519506 ABCA13Q86UQ4 5058 aa-0.3□□□□□ -2.46
LINC01609-201ENST00000519506 ARFGEF2Q9Y6D5 1785 aa-0.3□□□□□ -2.46
LINC01609-201ENST00000519506 CCDC18Q5T9S5 1454 aa-0.3□□□□□ -2.46
LINC01609-201ENST00000519506 LRP1BQ9NZR2 4599 aa-0.31□□□□□ -2.46
LINC01609-201ENST00000519506 NDUFB1O75438 58 aa-0.31□□□□□ -2.46
LINC01609-201ENST00000519506 ACANP16112 2415 aa-0.32□□□□□ -2.46
LINC01609-201ENST00000519506 NWD1Q149M9 1564 aa-0.32□□□□□ -2.46
LINC01609-201ENST00000519506 SCN11AQ9UI33 1791 aa-0.32□□□□□ -2.46
LINC01609-201ENST00000519506 DEFA5Q01523 94 aa-0.32□□□□□ -2.46
LINC01609-201ENST00000519506 ERVK-7P63135 1459 aa-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 NESP48681 1621 aa-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 UMAD1C9J7I0 102 aa-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 STARD9Q9P2P6 4700 aa-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 MAP1AP78559 2803 aaPredicted RBP-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 FAT3Q8TDW7 4589 aa-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.33□□□□□ -2.46
LINC01609-201ENST00000519506 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
LINC01609-201ENST00000519506 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.46
LINC01609-201ENST00000519506 CNOT1A5YKK6 2376 aaKnown RBP-0.35□□□□□ -2.47
LINC01609-201ENST00000519506 A0A087WXM4 84 aa-0.35□□□□□ -2.47
LINC01609-201ENST00000519506 SMIM13P0DJ93 91 aa-0.35□□□□□ -2.47
LINC01609-201ENST00000519506 BVES-AS1Q5T3Y7 98 aa-0.35□□□□□ -2.47
LINC01609-201ENST00000519506 TRANK1O15050 2925 aa-0.35□□□□□ -2.47
LINC01609-201ENST00000519506 DCAF1Q9Y4B6 1507 aa-0.36□□□□□ -2.47
LINC01609-201ENST00000519506 COX6B2Q6YFQ2 88 aa-0.36□□□□□ -2.47
LINC01609-201ENST00000519506 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
LINC01609-201ENST00000519506 PCNX1Q96RV3 2341 aa-0.37□□□□□ -2.47
LINC01609-201ENST00000519506 IFI27P40305 119 aaPredicted RBP-0.37□□□□□ -2.47
LINC01609-201ENST00000519506 NREPQ16612 68 aa-0.37□□□□□ -2.47
LINC01609-201ENST00000519506 MAGI3Q5TCQ9 1506 aa-0.38□□□□□ -2.47
LINC01609-201ENST00000519506 PLCH1Q4KWH8 1693 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 ADAMTS12P58397 1594 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 ARHGAP35Q9NRY4 1499 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 LINC00158P58513 81 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 KRTAP6-2Q3LI66 62 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 DEFB121Q5J5C9 76 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 PRO3102Q9H379 93 aa-0.39□□□□□ -2.47
LINC01609-201ENST00000519506 DNHD1Q96M86 4753 aa-0.4□□□□□ -2.47
LINC01609-201ENST00000519506 NDUFA4O00483 81 aa-0.4□□□□□ -2.47
LINC01609-201ENST00000519506 MT4P47944 62 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms