RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 A0A096LNI7 61 aa7.66□□□□□ -1.18
PCDHGB4-201ENST00000519479 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
PCDHGB4-201ENST00000519479 A6NED7 52 aa7.65□□□□□ -1.18
PCDHGB4-201ENST00000519479 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.19
PCDHGB4-201ENST00000519479 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.19
PCDHGB4-201ENST00000519479 SEC61GP60059 68 aa7.65□□□□□ -1.19
PCDHGB4-201ENST00000519479 LINC01556Q5JQF7 62 aa7.64□□□□□ -1.19
PCDHGB4-201ENST00000519479 TENM4Q6N022 2769 aa7.64□□□□□ -1.19
PCDHGB4-201ENST00000519479 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
PCDHGB4-201ENST00000519479 H3BNG1 76 aa7.64□□□□□ -1.19
PCDHGB4-201ENST00000519479 APCP25054 2843 aa7.63□□□□□ -1.19
PCDHGB4-201ENST00000519479 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
PCDHGB4-201ENST00000519479 H0Y9J4 135 aa7.62□□□□□ -1.19
PCDHGB4-201ENST00000519479 PRYO14603 147 aa7.62□□□□□ -1.19
PCDHGB4-201ENST00000519479 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
PCDHGB4-201ENST00000519479 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
PCDHGB4-201ENST00000519479 F8WDY8 70 aa7.61□□□□□ -1.19
PCDHGB4-201ENST00000519479 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
PCDHGB4-201ENST00000519479 PSPHP1O15172 72 aa7.6□□□□□ -1.19
PCDHGB4-201ENST00000519479 Q6ZVQ6 151 aa7.59□□□□□ -1.19
PCDHGB4-201ENST00000519479 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
PCDHGB4-201ENST00000519479 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
PCDHGB4-201ENST00000519479 SMCR5Q8TEV8 140 aa7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 ITPR2Q14571 2701 aa7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 CUBNO60494 3623 aa7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 LINC01547P58512 204 aaPredicted RBP7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 PRR34Q9NV39 138 aa7.58□□□□□ -1.2
PCDHGB4-201ENST00000519479 WIPF1O43516 503 aa7.57□□□□□ -1.2
PCDHGB4-201ENST00000519479 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
PCDHGB4-201ENST00000519479 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
PCDHGB4-201ENST00000519479 KRTAP10-11P60412 298 aa7.56□□□□□ -1.2
PCDHGB4-201ENST00000519479 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
PCDHGB4-201ENST00000519479 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
PCDHGB4-201ENST00000519479 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
PCDHGB4-201ENST00000519479 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
PCDHGB4-201ENST00000519479 ELOF1P60002 83 aaKnown RBP7.55□□□□□ -1.2
PCDHGB4-201ENST00000519479 K7EIL1 84 aa7.54□□□□□ -1.2
PCDHGB4-201ENST00000519479 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
PCDHGB4-201ENST00000519479 NF1P21359 2839 aa7.54□□□□□ -1.2
PCDHGB4-201ENST00000519479 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
PCDHGB4-201ENST00000519479 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 VPREB1P12018 145 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 Q6ZQT0 140 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 Q6ZRP5 223 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 MDFIQ99750 246 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
PCDHGB4-201ENST00000519479 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
PCDHGB4-201ENST00000519479 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
PCDHGB4-201ENST00000519479 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
PCDHGB4-201ENST00000519479 LINC00167Q96N53 147 aa7.52□□□□□ -1.21
PCDHGB4-201ENST00000519479 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
PCDHGB4-201ENST00000519479 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
PCDHGB4-201ENST00000519479 BCE1O60756 84 aa7.51□□□□□ -1.21
PCDHGB4-201ENST00000519479 SPINK6Q6UWN8 80 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 CXCL6P80162 114 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 DNAH10OSP0CZ25 163 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 Q8N9L7 120 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 LINC01600Q96MT4 127 aa7.5□□□□□ -1.21
PCDHGB4-201ENST00000519479 PRLHP81277 87 aa7.49□□□□□ -1.21
PCDHGB4-201ENST00000519479 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
PCDHGB4-201ENST00000519479 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
PCDHGB4-201ENST00000519479 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
PCDHGB4-201ENST00000519479 WWC2-AS2Q96NR7 200 aa7.47□□□□□ -1.21
PCDHGB4-201ENST00000519479 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
PCDHGB4-201ENST00000519479 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
PCDHGB4-201ENST00000519479 Q6ZRX8 168 aa7.46□□□□□ -1.22
PCDHGB4-201ENST00000519479 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
PCDHGB4-201ENST00000519479 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
PCDHGB4-201ENST00000519479 Q9BRP9 147 aa7.45□□□□□ -1.22
PCDHGB4-201ENST00000519479 KMT2BQ9UMN6 2715 aaPredicted RBP7.45□□□□□ -1.22
PCDHGB4-201ENST00000519479 A0A087WSZ3 146 aa7.45□□□□□ -1.22
PCDHGB4-201ENST00000519479 FAM168BA1KXE4 195 aa7.44□□□□□ -1.22
PCDHGB4-201ENST00000519479 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
PCDHGB4-201ENST00000519479 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
PCDHGB4-201ENST00000519479 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
PCDHGB4-201ENST00000519479 PDZD2O15018 2839 aa7.42□□□□□ -1.22
PCDHGB4-201ENST00000519479 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
PCDHGB4-201ENST00000519479 NIPBLQ6KC79 2804 aaeCLIP7.4□□□□□ -1.23
PCDHGB4-201ENST00000519479 SMIM29Q86T20 159 aa7.4□□□□□ -1.23
PCDHGB4-201ENST00000519479 OBSCN-AS1Q96MR7 158 aa7.39□□□□□ -1.23
PCDHGB4-201ENST00000519479 C16orf90A8MZG2 172 aa7.38□□□□□ -1.23
PCDHGB4-201ENST00000519479 Q8NBF4 154 aa7.38□□□□□ -1.23
PCDHGB4-201ENST00000519479 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
PCDHGB4-201ENST00000519479 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 CASC10Q5T4H9 136 aa7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 H0Y9P7 68 aa7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 Q8NDZ9 215 aa7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 PHF5AQ7RTV0 110 aaKnown RBP7.37□□□□□ -1.23
PCDHGB4-201ENST00000519479 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
PCDHGB4-201ENST00000519479 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
PCDHGB4-201ENST00000519479 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
PCDHGB4-201ENST00000519479 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
PCDHGB4-201ENST00000519479 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
PCDHGB4-201ENST00000519479 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
PCDHGB4-201ENST00000519479 KRTAP21-3Q3LHN1 58 aa7.35□□□□□ -1.23
PCDHGB4-201ENST00000519479 H7BZZ5 65 aa7.35□□□□□ -1.23
PCDHGB4-201ENST00000519479 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms