RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM167BQ9NRX6 74 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 ABCA12Q86UK0 2595 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 FN1P02751 2386 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 TXNDC17Q9BRA2 123 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 HELZ2Q9BYK8 2649 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 NBPF19A0A087WUL8 3843 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 H3BRN7 92 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 USMG5Q96IX5 58 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 IFI27P40305 119 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 Q9BRP9 147 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 TMEM14CQ9P0S9 112 aa3.61□□□□□ -1.83
TRAPPC11-209ENST00000512476 SVEP1Q4LDE5 3571 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 CENPEQ02224 2701 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 K7EMI3 77 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 C10orf99Q6UWK7 81 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 SMR3AQ99954 134 aa3.6□□□□□ -1.83
TRAPPC11-209ENST00000512476 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.83
TRAPPC11-209ENST00000512476 A0A0J9YY99 117 aa3.59□□□□□ -1.83
TRAPPC11-209ENST00000512476 IGKV3-20P01619 116 aa3.59□□□□□ -1.83
TRAPPC11-209ENST00000512476 NDUFA11Q86Y39 141 aa3.59□□□□□ -1.83
TRAPPC11-209ENST00000512476 GCN1Q92616 2671 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-209ENST00000512476 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.84
TRAPPC11-209ENST00000512476 ITPR3Q14573 2671 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 UNC79Q9P2D8 2635 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 CSPG4Q6UVK1 2322 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 NDUFA4O00483 81 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 IGHV3-30P01768 117 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 IGHV3-30-5P0DP03 117 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 Q6ZTI0 123 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 ZNF469Q96JG9 3925 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
TRAPPC11-209ENST00000512476 CREBBPQ92793 2442 aa3.57□□□□□ -1.84
TRAPPC11-209ENST00000512476 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
TRAPPC11-209ENST00000512476 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
TRAPPC11-209ENST00000512476 AKAP9Q99996 3911 aa3.57□□□□□ -1.84
TRAPPC11-209ENST00000512476 COX7B2Q8TF08 81 aa3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 WFDC10AQ9H1F0 79 aa3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 TEX15Q9BXT5 2789 aa3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 MAP1AP78559 2803 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-209ENST00000512476 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 ITPR2Q14571 2701 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 CCDC168Q8NDH2 2452 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 LINC01549A6NIU2 74 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 HIGD1CA8MV81 97 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 HECTD1Q9ULT8 2610 aa3.55□□□□□ -1.84
TRAPPC11-209ENST00000512476 TRBV6-1A0A0K0K1D8 114 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 Q86TA4 180 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 C4orf3Q8WVX3 66 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 TRBV6-5A0A0K0K1A5 114 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 PDE6GP18545 87 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 LINC00304Q8N9R0 145 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 RHPN1-AS1Q9BWJ2 59 aa3.54□□□□□ -1.84
TRAPPC11-209ENST00000512476 IGKV2-40A0A087WW87 121 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 F8VRH5 84 aa3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 IGKV2D-40P01614 121 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 DEFB136Q30KP8 78 aa3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 V9GYV3 84 aa3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 A0A087WTM6 91 aa3.53□□□□□ -1.84
TRAPPC11-209ENST00000512476 MXRA5Q9NR99 2828 aa3.53□□□□□ -1.85
TRAPPC11-209ENST00000512476 LINC00322Q6ZN03 302 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 MYO9AB2RTY4 2548 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 DNAL4O96015 105 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 ACANP16112 2415 aa3.52□□□□□ -1.85
TRAPPC11-209ENST00000512476 CCL18P55774 89 aa3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 SPINK7P58062 85 aa3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 SONP18583 2426 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 TLN2Q9Y4G6 2542 aa3.51□□□□□ -1.85
TRAPPC11-209ENST00000512476 SMIM27A0A1W2PRY6 76 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 CRIP1P50238 77 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 HIVEP2P31629 2446 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 KRTAP10-3P60369 221 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 CUBNO60494 3623 aa3.5□□□□□ -1.85
TRAPPC11-209ENST00000512476 DEFB1P60022 68 aa3.49□□□□□ -1.85
TRAPPC11-209ENST00000512476 IGKV2-29A2NJV5 120 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-209ENST00000512476 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
TRAPPC11-209ENST00000512476 TRBV6-4A0A1B0GX49 114 aa3.48□□□□□ -1.85
TRAPPC11-209ENST00000512476 SPINK4O60575 86 aa3.48□□□□□ -1.85
TRAPPC11-209ENST00000512476 FAM74A4Q5TZK3 123 aa3.48□□□□□ -1.85
TRAPPC11-209ENST00000512476 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
TRAPPC11-209ENST00000512476 PRR9Q5T870 116 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms