RNA–Protein interactions for RNA: ENST00000510290.5

SRPK1-211, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-211ENST00000510290 TNCP24821 2201 aa1.59□□□□□ -2.15
SRPK1-211ENST00000510290 LOC730098B7Z3J9 87 aa1.59□□□□□ -2.15
SRPK1-211ENST00000510290 ACYP2P14621 99 aa1.59□□□□□ -2.15
SRPK1-211ENST00000510290 UNC13CQ8NB66 2214 aa1.59□□□□□ -2.16
SRPK1-211ENST00000510290 ABCA4P78363 2273 aa1.58□□□□□ -2.16
SRPK1-211ENST00000510290 NDUFA1O15239 70 aa1.58□□□□□ -2.16
SRPK1-211ENST00000510290 MRPL33O75394 65 aaKnown RBP1.58□□□□□ -2.16
SRPK1-211ENST00000510290 Q6ZQY7 126 aa1.58□□□□□ -2.16
SRPK1-211ENST00000510290 SPAG17Q6Q759 2223 aa1.57□□□□□ -2.16
SRPK1-211ENST00000510290 LINC00158P58513 81 aa1.57□□□□□ -2.16
SRPK1-211ENST00000510290 COL6A6A6NMZ7 2263 aa1.57□□□□□ -2.16
SRPK1-211ENST00000510290 KRTAP10-4P60372 401 aaPredicted RBP1.56□□□□□ -2.16
SRPK1-211ENST00000510290 PRB3Q04118 309 aaPredicted RBP1.56□□□□□ -2.16
SRPK1-211ENST00000510290 SMIM11BQ8TCY0 68 aa1.56□□□□□ -2.16
SRPK1-211ENST00000510290 DEFB131BA0A096LNP1 70 aa1.55□□□□□ -2.16
SRPK1-211ENST00000510290 CRIP1P50238 77 aa1.55□□□□□ -2.16
SRPK1-211ENST00000510290 SSBP3-AS1Q7Z2R9 100 aa1.55□□□□□ -2.16
SRPK1-211ENST00000510290 CCL19Q99731 98 aa1.55□□□□□ -2.16
SRPK1-211ENST00000510290 FLG2Q5D862 2391 aaPredicted RBP1.55□□□□□ -2.16
SRPK1-211ENST00000510290 CACNA1CQ13936 2221 aa1.54□□□□□ -2.16
SRPK1-211ENST00000510290 SPTY2D1-AS1A0A0U1RR47 76 aa1.53□□□□□ -2.16
SRPK1-211ENST00000510290 M0R2N4 97 aa1.53□□□□□ -2.16
SRPK1-211ENST00000510290 RPS27P42677 84 aaKnown RBP1.52□□□□□ -2.17
SRPK1-211ENST00000510290 SPINK9Q5DT21 86 aa1.52□□□□□ -2.17
SRPK1-211ENST00000510290 Q8IZM0 81 aa1.52□□□□□ -2.17
SRPK1-211ENST00000510290 CDKN2A-AS1Q9UH64 79 aa1.52□□□□□ -2.17
SRPK1-211ENST00000510290 MED13LQ71F56 2210 aa1.51□□□□□ -2.17
SRPK1-211ENST00000510290 INE1O15225 51 aa1.51□□□□□ -2.17
SRPK1-211ENST00000510290 LY6G6CO95867 125 aa1.51□□□□□ -2.17
SRPK1-211ENST00000510290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
SRPK1-211ENST00000510290 PRO3102Q9H379 93 aa1.51□□□□□ -2.17
SRPK1-211ENST00000510290 F5P12259 2224 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 G3V318 75 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 CCL22O00626 93 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 RPL39P62891 51 aaKnown RBP1.5□□□□□ -2.17
SRPK1-211ENST00000510290 PIGYQ3MUY2 71 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 LINC00575Q6W349 94 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 Q6ZRX8 168 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 CACNA1BQ00975 2339 aa1.5□□□□□ -2.17
SRPK1-211ENST00000510290 POLR2KP53803 58 aaKnown RBP1.49□□□□□ -2.17
SRPK1-211ENST00000510290 RPL39LQ96EH5 51 aaKnown RBP1.49□□□□□ -2.17
SRPK1-211ENST00000510290 TECTAO75443 2155 aa1.49□□□□□ -2.17
SRPK1-211ENST00000510290 ALMS1Q8TCU4 4167 aa1.49□□□□□ -2.17
SRPK1-211ENST00000510290 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
SRPK1-211ENST00000510290 PRCDQ00LT1 54 aa1.48□□□□□ -2.17
SRPK1-211ENST00000510290 PLAC4Q8WY50 150 aa1.48□□□□□ -2.17
SRPK1-211ENST00000510290 GVQW2A0A096LPI5 108 aaPredicted RBP1.47□□□□□ -2.17
SRPK1-211ENST00000510290 KNTC1P50748 2209 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 A0A096LNT2 108 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 K7EQZ3 153 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 MINOS1Q5TGZ0 78 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 DEFB106AQ8N104 65 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 TP53AIP1Q9HCN2 124 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 CRIPTQ9P021 101 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 CADP27708 2225 aa1.46□□□□□ -2.18
SRPK1-211ENST00000510290 LYNX1G3V0Z9 82 aa1.45□□□□□ -2.18
SRPK1-211ENST00000510290 WFDC13Q8IUB5 93 aa1.45□□□□□ -2.18
SRPK1-211ENST00000510290 LEAP2Q969E1 77 aa1.45□□□□□ -2.18
SRPK1-211ENST00000510290 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
SRPK1-211ENST00000510290 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
SRPK1-211ENST00000510290 URB1O60287 2271 aaKnown RBP1.45□□□□□ -2.18
SRPK1-211ENST00000510290 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
SRPK1-211ENST00000510290 I3L2K1 104 aa1.44□□□□□ -2.18
SRPK1-211ENST00000510290 WFDC10BQ8IUB3 73 aa1.44□□□□□ -2.18
SRPK1-211ENST00000510290 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
SRPK1-211ENST00000510290 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
SRPK1-211ENST00000510290 ABCA1O95477 2261 aa1.43□□□□□ -2.18
SRPK1-211ENST00000510290 PTPRQQ9UMZ3 2332 aa1.42□□□□□ -2.18
SRPK1-211ENST00000510290 UBE2DNLQ8IWF7 75 aa1.42□□□□□ -2.18
SRPK1-211ENST00000510290 MRPL34Q9BQ48 92 aaKnown RBP1.42□□□□□ -2.18
SRPK1-211ENST00000510290 ROS1P08922 2347 aa1.41□□□□□ -2.18
SRPK1-211ENST00000510290 IGLV5-48A0A075B6I7 105 aa1.41□□□□□ -2.18
SRPK1-211ENST00000510290 ASXL3Q9C0F0 2248 aa1.4□□□□□ -2.18
SRPK1-211ENST00000510290 H0YAA0 97 aa1.4□□□□□ -2.19
SRPK1-211ENST00000510290 M0QY20 66 aa1.4□□□□□ -2.19
SRPK1-211ENST00000510290 SPINK13Q1W4C9 94 aa1.4□□□□□ -2.19
SRPK1-211ENST00000510290 COX6B2Q6YFQ2 88 aa1.4□□□□□ -2.19
SRPK1-211ENST00000510290 USMG5Q96IX5 58 aa1.4□□□□□ -2.19
SRPK1-211ENST00000510290 COX6A2Q02221 97 aa1.39□□□□□ -2.19
SRPK1-211ENST00000510290 KAAG1Q9UBP8 84 aa1.39□□□□□ -2.19
SRPK1-211ENST00000510290 PDE4DIPQ5VU43 2346 aa1.39□□□□□ -2.19
SRPK1-211ENST00000510290 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
SRPK1-211ENST00000510290 WT1-ASQ06250 92 aa1.38□□□□□ -2.19
SRPK1-211ENST00000510290 TMEM167AQ8TBQ9 72 aa1.38□□□□□ -2.19
SRPK1-211ENST00000510290 TOMM7Q9P0U1 55 aa1.38□□□□□ -2.19
SRPK1-211ENST00000510290 DOPEY2Q9Y3R5 2298 aa1.38□□□□□ -2.19
SRPK1-211ENST00000510290 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
SRPK1-211ENST00000510290 RPL39P5Q59GN2 51 aa1.37□□□□□ -2.19
SRPK1-211ENST00000510290 DEFB104AQ8WTQ1 72 aa1.37□□□□□ -2.19
SRPK1-211ENST00000510290 CNOT1A5YKK6 2376 aaKnown RBP1.37□□□□□ -2.19
SRPK1-211ENST00000510290 DEFB131AP59861 70 aa1.36□□□□□ -2.19
SRPK1-211ENST00000510290 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
SRPK1-211ENST00000510290 USF3Q68DE3 2245 aa1.35□□□□□ -2.19
SRPK1-211ENST00000510290 A0A0C4DFX4 3053 aa1.35□□□□□ -2.19
SRPK1-211ENST00000510290 MMP24-AS1A0A0U1RRL7 71 aa1.35□□□□□ -2.19
SRPK1-211ENST00000510290 DEFB108AA8MXU0 73 aa1.35□□□□□ -2.19
SRPK1-211ENST00000510290 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
SRPK1-211ENST00000510290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.34□□□□□ -2.191e-8■■■■□ 19.6
SRPK1-211ENST00000510290 LELP1Q5T871 98 aa1.34□□□□□ -2.19
SRPK1-211ENST00000510290 DEFB123Q8N688 67 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms