RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 WDFY3Q8IZQ1 3526 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 TRGV2A0A075B6R0 118 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 IGKV2-29A2NJV5 120 aaPredicted RBP2.65□□□□□ -1.99
NIPBL-206ENST00000509429 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 Q6ZTI0 123 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 DEFB124Q8NES8 71 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 LINC00308Q8TCZ7 52 aa2.65□□□□□ -1.99
NIPBL-206ENST00000509429 EYSQ5T1H1 3165 aa2.64□□□□□ -1.99
NIPBL-206ENST00000509429 H3BUA1 57 aa2.64□□□□□ -1.99
NIPBL-206ENST00000509429 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
NIPBL-206ENST00000509429 ZDBF2Q9HCK1 2354 aa2.63□□□□□ -1.99
NIPBL-206ENST00000509429 TRBV6-4A0A1B0GX49 114 aa2.63□□□□□ -1.99
NIPBL-206ENST00000509429 DEFB123Q8N688 67 aa2.63□□□□□ -1.99
NIPBL-206ENST00000509429 PRUNE2Q8WUY3 3088 aa2.63□□□□□ -1.99
NIPBL-206ENST00000509429 CFAP54Q96N23 3096 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 SPEGQ15772 3267 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 USMG5Q96IX5 58 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 PSORS1C2Q9UIG4 136 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 KNTC1P50748 2209 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 FREM2Q5SZK8 3169 aa2.62□□□□□ -1.99
NIPBL-206ENST00000509429 CADP27708 2225 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 NBDYA0A0U1RRE5 68 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 FAM168BA1KXE4 195 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 NDUFA1O15239 70 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 COX7BP24311 80 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 COX17Q14061 63 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 C5orf56Q8N8D9 126 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 TYMSOSQ8TAI1 123 aa2.61□□□□□ -1.99
NIPBL-206ENST00000509429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.6□□□□□ -1.99
NIPBL-206ENST00000509429 TRGV1A0A0A0MS02 117 aa2.6□□□□□ -1.99
NIPBL-206ENST00000509429 LYNX1G3V0Z9 82 aa2.6□□□□□ -1.99
NIPBL-206ENST00000509429 LYNX1P0DP58 116 aa2.6□□□□□ -1.99
NIPBL-206ENST00000509429 PRB3Q04118 309 aaPredicted RBP2.6□□□□□ -1.99
NIPBL-206ENST00000509429 PRR9Q5T870 116 aa2.6□□□□□ -1.99
NIPBL-206ENST00000509429 RPL39LQ96EH5 51 aaKnown RBP2.6□□□□□ -1.99
NIPBL-206ENST00000509429 Q96NJ1 140 aa2.6□□□□□ -1.99
NIPBL-206ENST00000509429 PIEZO2Q9H5I5 2752 aa2.59□□□□□ -1.99
NIPBL-206ENST00000509429 ANKHD1Q8IWZ3 2542 aaKnown RBP2.59□□□□□ -1.99
NIPBL-206ENST00000509429 POLR2KP53803 58 aaKnown RBP2.59□□□□□ -1.99
NIPBL-206ENST00000509429 LINC00612Q8N6U2 182 aa2.59□□□□□ -1.99
NIPBL-206ENST00000509429 SMIM11BQ8TCY0 68 aa2.59□□□□□ -1.99
NIPBL-206ENST00000509429 NCOR1O75376 2440 aa2.59□□□□□ -2
NIPBL-206ENST00000509429 A0A1B0GU69 56 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 A0A1W2PNN7 141 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 TNRC18O15417 2968 aaPredicted RBP2.58□□□□□ -2
NIPBL-206ENST00000509429 LINC00158P58513 81 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 R4GN34 69 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 GPR179Q6PRD1 2367 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 FRYLO94915 3013 aa2.58□□□□□ -2
NIPBL-206ENST00000509429 SPENQ96T58 3664 aaKnown RBP2.57□□□□□ -2
NIPBL-206ENST00000509429 VPS13AQ96RL7 3174 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 A0A0J9YWU9 116 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 G3V318 75 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 PRB2P02812 416 aaPredicted RBP2.57□□□□□ -2
NIPBL-206ENST00000509429 LINC00315P59091 139 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 MAPK1IP1LQ8NDC0 245 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 OTOGLQ3ZCN5 2332 aa2.57□□□□□ -2
NIPBL-206ENST00000509429 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 M0QY20 66 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 RPL39P62891 51 aaKnown RBP2.56□□□□□ -2
NIPBL-206ENST00000509429 Q8N9L7 120 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 DMDP11532 3685 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 PKDREJQ9NTG1 2253 aa2.56□□□□□ -2
NIPBL-206ENST00000509429 BDP1A6H8Y1 2624 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 DEFB131BA0A096LNP1 70 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 A8MTW9 85 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 M0R2N4 97 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 URB1O60287 2271 aaKnown RBP2.55□□□□□ -2
NIPBL-206ENST00000509429 PRB1P04280 392 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 PRRC2CQ9Y520 2896 aaKnown RBP2.55□□□□□ -2
NIPBL-206ENST00000509429 FRYQ5TBA9 3013 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 NBEAQ8NFP9 2946 aa2.55□□□□□ -2
NIPBL-206ENST00000509429 ANKRD11Q6UB99 2663 aaPredicted RBP2.55□□□□□ -2
NIPBL-206ENST00000509429 ICE1Q9Y2F5 2266 aa2.54□□□□□ -2
NIPBL-206ENST00000509429 CELSR3Q9NYQ7 3312 aa2.54□□□□□ -2
NIPBL-206ENST00000509429 DSPP15924 2871 aaKnown RBP2.54□□□□□ -2
NIPBL-206ENST00000509429 H3BUX3 64 aa2.54□□□□□ -2
NIPBL-206ENST00000509429 DSCR10P59022 87 aa2.54□□□□□ -2
NIPBL-206ENST00000509429 RPL37AP61513 92 aaKnown RBP2.54□□□□□ -2
NIPBL-206ENST00000509429 RP1L1Q8IWN7 2480 aaPredicted RBP2.54□□□□□ -2
NIPBL-206ENST00000509429 ANKRD17O75179 2603 aaKnown RBP2.53□□□□□ -2
NIPBL-206ENST00000509429 A0A0G2JQZ4 141 aa2.53□□□□□ -2
NIPBL-206ENST00000509429 Q6ZQY7 126 aa2.53□□□□□ -2
NIPBL-206ENST00000509429 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
NIPBL-206ENST00000509429 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
NIPBL-206ENST00000509429 ZZEF1O43149 2961 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 APC2O95996 2303 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 CFAP47Q6ZTR5 3102 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 IGKV2-28A0A075B6P5 120 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 IGKV2D-28P01615 120 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 LY6EQ16553 131 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 SPINK13Q1W4C9 94 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 CCL19Q99731 98 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 SPTBN2O15020 2390 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 CACNA1HO95180 2353 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
NIPBL-206ENST00000509429 ABCA1O95477 2261 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms