RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 Q75L30 129 aa6.51□□□□□ -1.37
PDLIM5-207ENST00000503974 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
PDLIM5-207ENST00000503974 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
PDLIM5-207ENST00000503974 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
PDLIM5-207ENST00000503974 DNAH9Q9NYC9 4486 aa6.5□□□□□ -1.37
PDLIM5-207ENST00000503974 IGLV5-45A0A087WSX0 123 aa6.49□□□□□ -1.37
PDLIM5-207ENST00000503974 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
PDLIM5-207ENST00000503974 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-207ENST00000503974 Q8NAQ8 132 aa6.49□□□□□ -1.37
PDLIM5-207ENST00000503974 TENM3Q9P273 2699 aa6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 LCE6AA0A183 80 aa6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 H0Y9J4 135 aa6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
PDLIM5-207ENST00000503974 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-207ENST00000503974 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
PDLIM5-207ENST00000503974 IGHV3OR16-12A0A075B7B8 117 aa6.46□□□□□ -1.37
PDLIM5-207ENST00000503974 A6NED7 52 aa6.46□□□□□ -1.37
PDLIM5-207ENST00000503974 F5H697 171 aa6.46□□□□□ -1.37
PDLIM5-207ENST00000503974 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.37
PDLIM5-207ENST00000503974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-207ENST00000503974 C3orf84H3BNL1 204 aa6.46□□□□□ -1.38
PDLIM5-207ENST00000503974 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-207ENST00000503974 C16orf74Q96GX8 76 aa6.46□□□□□ -1.38
PDLIM5-207ENST00000503974 PRR15LQ9BU68 103 aa6.46□□□□□ -1.38
PDLIM5-207ENST00000503974 M0QY20 66 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 M0R2N4 97 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 PRM2P04554 102 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 PRAC1Q96KF2 57 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
PDLIM5-207ENST00000503974 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
PDLIM5-207ENST00000503974 IGHV3-16A0A0C4DH30 117 aa6.44□□□□□ -1.38
PDLIM5-207ENST00000503974 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
PDLIM5-207ENST00000503974 A0A0J9YWU9 116 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 LINC00612Q8N6U2 182 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 Q8N814 137 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 MUC4Q99102 2169 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 STAB2Q8WWQ8 2551 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 HTN1P15515 57 aa6.43□□□□□ -1.38
PDLIM5-207ENST00000503974 SCXQ7RTU7 201 aa6.42□□□□□ -1.38
PDLIM5-207ENST00000503974 DEFB4AO15263 64 aa6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 PDE6GP18545 87 aa6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 CELA1Q9UNI1 258 aa6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 NTM-AS1Q6ZSK4 140 aa6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-207ENST00000503974 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-207ENST00000503974 SPART-AS1P0CW21 52 aa6.4□□□□□ -1.38
PDLIM5-207ENST00000503974 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-207ENST00000503974 IGKV4-1P06312 121 aa6.4□□□□□ -1.39
PDLIM5-207ENST00000503974 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-207ENST00000503974 COX6A2Q02221 97 aa6.39□□□□□ -1.39
PDLIM5-207ENST00000503974 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
PDLIM5-207ENST00000503974 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
PDLIM5-207ENST00000503974 TRGV1A0A0A0MS02 117 aa6.37□□□□□ -1.39
PDLIM5-207ENST00000503974 CCL18P55774 89 aa6.37□□□□□ -1.39
PDLIM5-207ENST00000503974 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
PDLIM5-207ENST00000503974 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
PDLIM5-207ENST00000503974 TGP01266 2768 aa6.36□□□□□ -1.39
PDLIM5-207ENST00000503974 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-207ENST00000503974 FAM74A4Q5TZK3 123 aa6.36□□□□□ -1.39
PDLIM5-207ENST00000503974 IGLV4-60A0A075B6I1 120 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 DEFB130BP0DP73 79 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 DEFB130AP0DP74 79 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 PRR4Q16378 134 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 Q9BRP9 147 aa6.35□□□□□ -1.39
PDLIM5-207ENST00000503974 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
PDLIM5-207ENST00000503974 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
PDLIM5-207ENST00000503974 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
PDLIM5-207ENST00000503974 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.4
PDLIM5-207ENST00000503974 MUC7Q8TAX7 377 aa6.34□□□□□ -1.4
PDLIM5-207ENST00000503974 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.4
PDLIM5-207ENST00000503974 A0A087X002 238 aa6.33□□□□□ -1.4
PDLIM5-207ENST00000503974 NDUFB1O75438 58 aa6.33□□□□□ -1.4
PDLIM5-207ENST00000503974 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PDLIM5-207ENST00000503974 Q8N9L7 120 aa6.33□□□□□ -1.4
PDLIM5-207ENST00000503974 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 K7EQD1 137 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 LINC00476Q8WZB0 136 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 LINC00208Q96KT6 92 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 DEFB131BA0A096LNP1 70 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
PDLIM5-207ENST00000503974 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-207ENST00000503974 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
PDLIM5-207ENST00000503974 IGHV3-53P01767 116 aa6.31□□□□□ -1.4
PDLIM5-207ENST00000503974 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
PDLIM5-207ENST00000503974 H3BNG1 76 aa6.3□□□□□ -1.4
PDLIM5-207ENST00000503974 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 LINC00158P58513 81 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 PLAC8Q9NZF1 115 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 PRO0255Q9UI72 69 aa6.29□□□□□ -1.4
PDLIM5-207ENST00000503974 TRGV4A0A0C4DH28 118 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms