RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 PRR3P79522 188 aaKnown RBP3.51□□□□□ -1.85
CLDND1-208ENST00000503004 Q1T7F1 81 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 CELA1Q9UNI1 258 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 COL6A5A8TX70 2615 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 IGHV4-28A0A0C4DH34 117 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 HTN3P15516 51 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 TMEM254Q8TBM7 123 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
CLDND1-208ENST00000503004 M0R2N4 97 aa3.5□□□□□ -1.85
CLDND1-208ENST00000503004 FUSP35637 526 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLDND1-208ENST00000503004 C9orf66Q5T8R8 295 aa3.5□□□□□ -1.85
CLDND1-208ENST00000503004 hDV103S1A0JD37 113 aa3.5□□□□□ -1.85
CLDND1-208ENST00000503004 PRB2P02812 416 aaPredicted RBP3.5□□□□□ -1.85
CLDND1-208ENST00000503004 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
CLDND1-208ENST00000503004 A0A1B0GUV1 79 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
CLDND1-208ENST00000503004 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
CLDND1-208ENST00000503004 TRAV22A0A0B4J277 110 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 LYRM9A8MSI8 78 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 TMEM256-PLSCR3K7ERE1 68 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 SYCNQ0VAF6 134 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 NREPQ16612 68 aa3.49□□□□□ -1.85
CLDND1-208ENST00000503004 H0YGX0 51 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 ZNF73O43830 326 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-208ENST00000503004 REG3AQ06141 175 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 Q8NAQ8 132 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 IGHV4-30-4P0DP06 118 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 Q6ZVQ6 151 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-208ENST00000503004 A8MUN3 132 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 Q8IZM0 81 aa3.48□□□□□ -1.85
CLDND1-208ENST00000503004 C16orf90A8MZG2 172 aa3.47□□□□□ -1.85
CLDND1-208ENST00000503004 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
CLDND1-208ENST00000503004 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
CLDND1-208ENST00000503004 Q8N9L7 120 aa3.47□□□□□ -1.85
CLDND1-208ENST00000503004 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
CLDND1-208ENST00000503004 UBE2BP63146 152 aa3.47□□□□□ -1.85
CLDND1-208ENST00000503004 ERC2-IT1O76042 136 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 C10orf25Q5T742 122 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 Q8NDZ9 215 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 C1orf64Q8NEQ6 169 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 KLK12Q9UKR0 248 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 MGAM2Q2M2H8 2515 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 A6NN06 94 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 JMJD7-PLA2G4BH0Y9G9 81 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 Q5VV11 94 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 LINC00167Q96N53 147 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 HIGD2AQ9BW72 106 aa3.46□□□□□ -1.86
CLDND1-208ENST00000503004 NDUFS5O43920 106 aa3.45□□□□□ -1.86
CLDND1-208ENST00000503004 NANOS2P60321 138 aaKnown RBP3.45□□□□□ -1.86
CLDND1-208ENST00000503004 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
CLDND1-208ENST00000503004 Q8N814 137 aa3.45□□□□□ -1.86
CLDND1-208ENST00000503004 Q6ZQT0 140 aa3.45□□□□□ -1.86
CLDND1-208ENST00000503004 CMYA5Q8N3K9 4069 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 PRR4Q16378 134 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 PHF5AQ7RTV0 110 aaKnown RBP3.44□□□□□ -1.86
CLDND1-208ENST00000503004 CYSRT1A8MQ03 144 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 BPY2O14599 106 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 LELP1Q5T871 98 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 SPTSSBQ8NFR3 76 aa3.44□□□□□ -1.86
CLDND1-208ENST00000503004 CXCL6P80162 114 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 OCR1Q9BZK8 76 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 KRTAP10-11P60412 298 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.43□□□□□ -1.86
CLDND1-208ENST00000503004 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 LYSTQ99698 3801 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 STAB2Q8WWQ8 2551 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 PSCAO43653 123 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 COX17Q14061 63 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 LCA10Q71F78 164 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 PRR34Q9NV39 138 aa3.43□□□□□ -1.86
CLDND1-208ENST00000503004 TENM2Q9NT68 2774 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 CSMD3Q7Z407 3707 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 HCG22E2RYF7 251 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 KPRPQ5T749 579 aaPredicted RBP3.42□□□□□ -1.86
CLDND1-208ENST00000503004 C7orf65Q6ZTY9 151 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 DIRC1Q969H9 104 aa3.42□□□□□ -1.86
CLDND1-208ENST00000503004 UBE2AP49459 152 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 LOC110117498A0A087WWA1 95 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 ATP11AUNQ6ZP68 121 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
CLDND1-208ENST00000503004 COL7A1Q02388 2944 aa3.4□□□□□ -1.86
CLDND1-208ENST00000503004 A0A0J9YWU9 116 aa3.4□□□□□ -1.86
CLDND1-208ENST00000503004 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.86
CLDND1-208ENST00000503004 Q6ZQY7 126 aa3.4□□□□□ -1.86
CLDND1-208ENST00000503004 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
CLDND1-208ENST00000503004 LINC00575Q6W349 94 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 DNAH3Q8TD57 4116 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms