RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 A0A087WTM6 91 aa14.04□□□□□ -0.16
PTPN13-205ENST00000502971 IGKV2-24A0A0C4DH68 120 aa14.04□□□□□ -0.16
PTPN13-205ENST00000502971 H3BQ85 93 aa14.03□□□□□ -0.16
PTPN13-205ENST00000502971 LINC00528Q8N1L1 170 aa14.03□□□□□ -0.16
PTPN13-205ENST00000502971 INAFM2P0DMQ5 153 aa14.02□□□□□ -0.16
PTPN13-205ENST00000502971 RPL37AP8A6NKH3 93 aa14.01□□□□□ -0.17
PTPN13-205ENST00000502971 C1orf134Q5TEV5 83 aa14.01□□□□□ -0.17
PTPN13-205ENST00000502971 OBSCN-AS1Q96MR7 158 aa14.01□□□□□ -0.17
PTPN13-205ENST00000502971 SPRR1AP35321 89 aa14□□□□□ -0.17
PTPN13-205ENST00000502971 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14□□□□□ -0.17
PTPN13-205ENST00000502971 SDIM1Q6ZPB5 146 aa14□□□□□ -0.17
PTPN13-205ENST00000502971 ALMS1Q8TCU4 4167 aa14□□□□□ -0.17
PTPN13-205ENST00000502971 LINC00474Q9P2X8 69 aa13.99□□□□□ -0.17
PTPN13-205ENST00000502971 A0A1W2PNN7 141 aa13.98□□□□□ -0.17
PTPN13-205ENST00000502971 GHRHP01286 108 aa13.98□□□□□ -0.17
PTPN13-205ENST00000502971 Q6ZQY7 126 aa13.98□□□□□ -0.17
PTPN13-205ENST00000502971 KMT2AQ03164 3969 aa13.98□□□□□ -0.17
PTPN13-205ENST00000502971 KMT2CQ8NEZ4 4911 aaKnown RBP13.97□□□□□ -0.17
PTPN13-205ENST00000502971 KRTAP4-16G5E9R7 235 aaPredicted RBP13.96□□□□□ -0.17
PTPN13-205ENST00000502971 LCE6AA0A183 80 aa13.95□□□□□ -0.18
PTPN13-205ENST00000502971 FAM240AA0A1B0GVK7 77 aa13.95□□□□□ -0.18
PTPN13-205ENST00000502971 JMJD7-PLA2G4BH0Y9G9 81 aa13.95□□□□□ -0.18
PTPN13-205ENST00000502971 CDIP1Q9H305 208 aa13.95□□□□□ -0.18
PTPN13-205ENST00000502971 ETDCA0A1B0GVM5 59 aa13.94□□□□□ -0.18
PTPN13-205ENST00000502971 CHTF8P0CG12 524 aa13.94□□□□□ -0.18
PTPN13-205ENST00000502971 B5MCH6 92 aa13.93□□□□□ -0.18
PTPN13-205ENST00000502971 Q6ZRX8 168 aa13.93□□□□□ -0.18
PTPN13-205ENST00000502971 REG3GQ6UW15 175 aa13.92□□□□□ -0.18
PTPN13-205ENST00000502971 DHRS4-AS1Q9P1J3 65 aa13.92□□□□□ -0.18
PTPN13-205ENST00000502971 DNAH6Q9C0G6 4158 aa13.91□□□□□ -0.18
PTPN13-205ENST00000502971 ACYP1P07311 99 aa13.91□□□□□ -0.18
PTPN13-205ENST00000502971 C14orf132Q9NPU4 83 aa13.9□□□□□ -0.18
PTPN13-205ENST00000502971 RTL8CO15255 209 aa13.89□□□□□ -0.19
PTPN13-205ENST00000502971 SIGMAR1Q99720 223 aa13.87□□□□□ -0.19
PTPN13-205ENST00000502971 LAMTOR3Q9UHA4 124 aa13.86□□□□□ -0.19
PTPN13-205ENST00000502971 SPACA4Q8TDM5 124 aa13.85□□□□□ -0.19
PTPN13-205ENST00000502971 Q9BRP9 147 aa13.85□□□□□ -0.19
PTPN13-205ENST00000502971 PHF5AQ7RTV0 110 aaKnown RBP13.84□□□□□ -0.19
PTPN13-205ENST00000502971 GAGE2AQ6NT46 116 aa13.84□□□□□ -0.19
PTPN13-205ENST00000502971 PANO1I0J062 215 aa13.83□□□□□ -0.2
PTPN13-205ENST00000502971 UBE2BP63146 152 aa13.83□□□□□ -0.2
PTPN13-205ENST00000502971 RBM3P98179 157 aaKnown RBP13.83□□□□□ -0.2
PTPN13-205ENST00000502971 A0A1B0GV72 72 aa13.82□□□□□ -0.2
PTPN13-205ENST00000502971 EPM2AB3EWF7 344 aa13.82□□□□□ -0.2
PTPN13-205ENST00000502971 DPH3Q96FX2 82 aa13.82□□□□□ -0.2
PTPN13-205ENST00000502971 SACSQ9NZJ4 4579 aa13.82□□□□□ -0.2
PTPN13-205ENST00000502971 HYDINQ4G0P3 5121 aa13.82□□□□□ -0.2
PTPN13-205ENST00000502971 IGLV5-52A0A0A0MRZ9 124 aa13.81□□□□□ -0.2
PTPN13-205ENST00000502971 TNP2Q05952 138 aa13.81□□□□□ -0.2
PTPN13-205ENST00000502971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-205ENST00000502971 DNAH2Q9P225 4427 aa13.8□□□□□ -0.2
PTPN13-205ENST00000502971 CCKP06307 115 aa13.8□□□□□ -0.2
PTPN13-205ENST00000502971 XGP55808 180 aa13.79□□□□□ -0.2
PTPN13-205ENST00000502971 NDUFV3P56181 108 aaKnown RBP13.78□□□□□ -0.2
PTPN13-205ENST00000502971 FUSP35637 526 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPN13-205ENST00000502971 FAM19A1Q7Z5A9 133 aa13.78□□□□□ -0.2
PTPN13-205ENST00000502971 LOC110117498A0A087WWA1 95 aa13.77□□□□□ -0.21
PTPN13-205ENST00000502971 RYR3Q15413 4870 aa13.76□□□□□ -0.21
PTPN13-205ENST00000502971 PDE6GP18545 87 aa13.76□□□□□ -0.21
PTPN13-205ENST00000502971 KRTAP11-1Q8IUC1 163 aa13.76□□□□□ -0.21
PTPN13-205ENST00000502971 DSCR8Q96T75 97 aa13.76□□□□□ -0.21
PTPN13-205ENST00000502971 MT-ATP8P03928 68 aa13.75□□□□□ -0.21
PTPN13-205ENST00000502971 LINC01547P58512 204 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-205ENST00000502971 Q8N377 158 aa13.75□□□□□ -0.21
PTPN13-205ENST00000502971 SMCR5Q8TEV8 140 aa13.75□□□□□ -0.21
PTPN13-205ENST00000502971 DEFB105AQ8NG35 78 aa13.74□□□□□ -0.21
PTPN13-205ENST00000502971 IGLV5-48A0A075B6I7 105 aa13.73□□□□□ -0.21
PTPN13-205ENST00000502971 H0Y9J4 135 aa13.73□□□□□ -0.21
PTPN13-205ENST00000502971 Q6ZQT0 140 aa13.73□□□□□ -0.21
PTPN13-205ENST00000502971 ERC2-IT1O76042 136 aa13.73□□□□□ -0.21
PTPN13-205ENST00000502971 DNAH17Q9UFH2 4485 aa13.72□□□□□ -0.21
PTPN13-205ENST00000502971 PRLHP81277 87 aa13.71□□□□□ -0.21
PTPN13-205ENST00000502971 ST20-AS1Q8NBB2 130 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 PLAC8Q9NZF1 115 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 RYR2Q92736 4967 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 TRBV7-4A0A0J9YYF1 115 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 C21orf62-AS1Q17RA5 79 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 HECTD4Q9Y4D8 3996 aa13.7□□□□□ -0.22
PTPN13-205ENST00000502971 LINC00643Q86TS7 51 aa13.68□□□□□ -0.22
PTPN13-205ENST00000502971 BCE1O60756 84 aa13.67□□□□□ -0.22
PTPN13-205ENST00000502971 LINC00336Q6ZUF6 198 aa13.67□□□□□ -0.22
PTPN13-205ENST00000502971 LINC00846Q9NV44 126 aa13.67□□□□□ -0.22
PTPN13-205ENST00000502971 FRAS1Q86XX4 4008 aa13.66□□□□□ -0.22
PTPN13-205ENST00000502971 SCGB1A1P11684 91 aa13.65□□□□□ -0.22
PTPN13-205ENST00000502971 UBE2AP49459 152 aa13.65□□□□□ -0.22
PTPN13-205ENST00000502971 HIGD2AQ9BW72 106 aa13.65□□□□□ -0.22
PTPN13-205ENST00000502971 KRTAP10-2P60368 255 aa13.64□□□□□ -0.23
PTPN13-205ENST00000502971 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
PTPN13-205ENST00000502971 C3orf22Q8N5N4 141 aa13.59□□□□□ -0.23
PTPN13-205ENST00000502971 Q6Q795 121 aa13.57□□□□□ -0.24
PTPN13-205ENST00000502971 SMIM29Q86T20 159 aa13.57□□□□□ -0.24
PTPN13-205ENST00000502971 TRBV7-7A0A0K0K1E9 115 aa13.56□□□□□ -0.24
PTPN13-205ENST00000502971 FAT2Q9NYQ8 4349 aa13.55□□□□□ -0.24
PTPN13-205ENST00000502971 UBL5Q9BZL1 73 aa13.55□□□□□ -0.24
PTPN13-205ENST00000502971 SPRR1BP22528 89 aa13.54□□□□□ -0.24
PTPN13-205ENST00000502971 PCP4P48539 62 aa13.54□□□□□ -0.24
PTPN13-205ENST00000502971 IMUPQ9GZP8 106 aa13.54□□□□□ -0.24
PTPN13-205ENST00000502971 PSORS1C2Q9UIG4 136 aa13.54□□□□□ -0.24
PTPN13-205ENST00000502971 F8WEM9 126 aa13.53□□□□□ -0.24
PTPN13-205ENST00000502971 Q6JHZ5 121 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms