RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 C1orf64Q8NEQ6 169 aa3.93□□□□□ -1.78
SOX2-OT-218ENST00000498731 IGLV1-51P01701 117 aa3.93□□□□□ -1.78
SOX2-OT-218ENST00000498731 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
SOX2-OT-218ENST00000498731 UBE2L6O14933 153 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 LINC00158P58513 81 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 CELA1Q9UNI1 258 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 Q8N814 137 aa3.92□□□□□ -1.78
SOX2-OT-218ENST00000498731 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 CMC4P56277 68 aaPredicted RBP3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 C9orf66Q5T8R8 295 aa3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 CLPSL2Q6UWE3 100 aa3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 COX7B2Q8TF08 81 aa3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 LINC00588Q9Y4M8 146 aa3.91□□□□□ -1.78
SOX2-OT-218ENST00000498731 M0R378 163 aa3.9□□□□□ -1.78
SOX2-OT-218ENST00000498731 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.78
SOX2-OT-218ENST00000498731 CHCHD10Q8WYQ3 142 aaPredicted RBP3.9□□□□□ -1.78
SOX2-OT-218ENST00000498731 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.79
SOX2-OT-218ENST00000498731 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
SOX2-OT-218ENST00000498731 Q5VV11 94 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 H0YGX0 51 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 LCA10Q71F78 164 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 C16orf74Q96GX8 76 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 LINC00167Q96N53 147 aa3.89□□□□□ -1.79
SOX2-OT-218ENST00000498731 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 C9orf116Q5BN46 136 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 ZNF706Q9Y5V0 76 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 STAB2Q8WWQ8 2551 aa3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 LINC00313P59037 77 aa3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 Q1T7F1 81 aa3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 TRBV6-4A0A1B0GX49 114 aa3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 H0Y9J4 135 aa3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 GIG44P09565 113 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGLV4-60A0A075B6I1 120 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGLV9-49A0A0B4J1Y8 123 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 NDUFS5O43920 106 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 C6orf99Q4VX62 202 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 CDC42SE2Q9NRR3 84 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGKV4-1P06312 121 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
SOX2-OT-218ENST00000498731 JMJD7-PLA2G4BH0Y9G9 81 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 TMEM256-PLSCR3K7ERE1 68 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 NDUFC1O43677 76 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 KLK12Q9UKR0 248 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 IGHV4-28A0A0C4DH34 117 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
SOX2-OT-218ENST00000498731 KRTAP21-3Q3LHN1 58 aa3.85□□□□□ -1.79
SOX2-OT-218ENST00000498731 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
SOX2-OT-218ENST00000498731 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
SOX2-OT-218ENST00000498731 PSCAO43653 123 aa3.85□□□□□ -1.79
SOX2-OT-218ENST00000498731 ST20-AS1Q8NBB2 130 aa3.85□□□□□ -1.79
SOX2-OT-218ENST00000498731 SMIM29Q86T20 159 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 A6NN06 94 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 Q6ZQY7 126 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 MUC7Q8TAX7 377 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
SOX2-OT-218ENST00000498731 ATP5EP56381 51 aaPredicted RBP3.84□□□□□ -1.8
SOX2-OT-218ENST00000498731 SRRM2Q9UQ35 2752 aaKnown RBP3.84□□□□□ -1.8
SOX2-OT-218ENST00000498731 ZNF73O43830 326 aaPredicted RBP3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 BCE1O60756 84 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 ANGP03950 147 aaKnown RBP3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 CXCL6P80162 114 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 HCG22E2RYF7 251 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 C3orf84H3BNL1 204 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 CSNK1G2-AS1Q8NCQ2 148 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 SPART-AS1P0CW21 52 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 PRO0255Q9UI72 69 aa3.83□□□□□ -1.8
SOX2-OT-218ENST00000498731 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
SOX2-OT-218ENST00000498731 IGHV3OR16-9A0A0B4J2B5 98 aa3.82□□□□□ -1.8
SOX2-OT-218ENST00000498731 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
SOX2-OT-218ENST00000498731 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
SOX2-OT-218ENST00000498731 ANK2Q01484 3957 aa3.81□□□□□ -1.8
SOX2-OT-218ENST00000498731 TRBV6-8A0A0A6YYG3 113 aa3.81□□□□□ -1.8
SOX2-OT-218ENST00000498731 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
SOX2-OT-218ENST00000498731 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
SOX2-OT-218ENST00000498731 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 A0A0J9YWU9 116 aa3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 UBE2BP63146 152 aa3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
SOX2-OT-218ENST00000498731 MOBPQ13875 183 aa3.78□□□□□ -1.8
SOX2-OT-218ENST00000498731 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
SOX2-OT-218ENST00000498731 MP68P56378 58 aa3.78□□□□□ -1.8
SOX2-OT-218ENST00000498731 A0A0G2JQZ4 141 aa3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 A0A1W2PNN7 141 aa3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 Q8NAQ8 132 aa3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 DEFB131BA0A096LNP1 70 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms