RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TIMM17BO60830 172 aa19.17■□□□□ 0.66
CBX4-203ENST00000494546 ERC2-IT1O76042 136 aa19.17■□□□□ 0.66
CBX4-203ENST00000494546 GAGE2AQ6NT46 116 aa19.17■□□□□ 0.66
CBX4-203ENST00000494546 LINC00308Q8TCZ7 52 aa19.17■□□□□ 0.66
CBX4-203ENST00000494546 Q9BRP9 147 aa19.16■□□□□ 0.66
CBX4-203ENST00000494546 CTAG1AP78358 180 aa19.14■□□□□ 0.65
CBX4-203ENST00000494546 LINC00483Q53H64 154 aa19.13■□□□□ 0.65
CBX4-203ENST00000494546 SPAG11AQ6PDA7 123 aa19.13■□□□□ 0.65
CBX4-203ENST00000494546 C20orf202A1L168 122 aa19.12■□□□□ 0.65
CBX4-203ENST00000494546 SPANXCQ9NY87 97 aa19.12■□□□□ 0.65
CBX4-203ENST00000494546 ZNF73O43830 326 aaPredicted RBP19.11■□□□□ 0.65
CBX4-203ENST00000494546 C4orf48Q5BLP8 95 aa19.1■□□□□ 0.65
CBX4-203ENST00000494546 Q8NBF4 154 aa19.1■□□□□ 0.65
CBX4-203ENST00000494546 JOSD1Q15040 202 aaPredicted RBP19.09■□□□□ 0.65
CBX4-203ENST00000494546 OR13C6PQ8NH95 151 aa19.09■□□□□ 0.65
CBX4-203ENST00000494546 ATOH7Q8N100 152 aa19.06■□□□□ 0.64
CBX4-203ENST00000494546 CBY1Q9Y3M2 126 aa19.06■□□□□ 0.64
CBX4-203ENST00000494546 ANKRD39Q53RE8 183 aa19.04■□□□□ 0.64
CBX4-203ENST00000494546 IGLV9-49A0A0B4J1Y8 123 aa19.03■□□□□ 0.64
CBX4-203ENST00000494546 HINT1P49773 126 aaPredicted RBP19.03■□□□□ 0.64
CBX4-203ENST00000494546 SCGB1D4Q6XE38 83 aa19.03■□□□□ 0.64
CBX4-203ENST00000494546 IGLV7-46A0A075B6I9 117 aa19.02■□□□□ 0.64
CBX4-203ENST00000494546 MOBPQ13875 183 aa19.01■□□□□ 0.63
CBX4-203ENST00000494546 SPANXDQ9BXN6 97 aa18.99■□□□□ 0.63
CBX4-203ENST00000494546 LINC00518Q8N0U6 118 aa18.95■□□□□ 0.62
CBX4-203ENST00000494546 ST20-AS1Q8NBB2 130 aa18.95■□□□□ 0.62
CBX4-203ENST00000494546 AKR1D1P51857 326 aa18.94■□□□□ 0.62
CBX4-203ENST00000494546 SPINK1P00995 79 aa18.93■□□□□ 0.62
CBX4-203ENST00000494546 TPRXLQ17RH7 258 aa18.93■□□□□ 0.62
CBX4-203ENST00000494546 SSBP3-AS1Q7Z2R9 100 aa18.92■□□□□ 0.62
CBX4-203ENST00000494546 PCP2Q8IVA1 136 aa18.92■□□□□ 0.62
CBX4-203ENST00000494546 CDIP1Q9H305 208 aa18.92■□□□□ 0.62
CBX4-203ENST00000494546 S100A1P23297 94 aa18.9■□□□□ 0.62
CBX4-203ENST00000494546 COPS9Q8WXC6 57 aa18.89■□□□□ 0.61
CBX4-203ENST00000494546 S100A2P29034 98 aa18.88■□□□□ 0.61
CBX4-203ENST00000494546 C9orf153Q5TBE3 101 aa18.88■□□□□ 0.61
CBX4-203ENST00000494546 HIST3H2BBQ8N257 126 aa18.88■□□□□ 0.61
CBX4-203ENST00000494546 C5orf52A6NGY3 159 aa18.86■□□□□ 0.61
CBX4-203ENST00000494546 IFITM1P13164 125 aa18.86■□□□□ 0.61
CBX4-203ENST00000494546 C6orf99Q4VX62 202 aa18.86■□□□□ 0.61
CBX4-203ENST00000494546 DHRS4-AS1Q9P1J3 65 aa18.86■□□□□ 0.61
CBX4-203ENST00000494546 FP248Q71RG6 208 aaPredicted RBP18.85■□□□□ 0.61
CBX4-203ENST00000494546 HIST1H2BLQ99880 126 aa18.85■□□□□ 0.61
CBX4-203ENST00000494546 COX7BP24311 80 aa18.84■□□□□ 0.61
CBX4-203ENST00000494546 SNRPEP62304 92 aaKnown RBP18.83■□□□□ 0.6
CBX4-203ENST00000494546 Q6ZVH6 145 aa18.83■□□□□ 0.6
CBX4-203ENST00000494546 ELOF1P60002 83 aaKnown RBP18.82■□□□□ 0.6
CBX4-203ENST00000494546 MUSTN1Q8IVN3 82 aa18.82■□□□□ 0.6
CBX4-203ENST00000494546 A6NDN8 102 aa18.79■□□□□ 0.6
CBX4-203ENST00000494546 S100A6P06703 90 aa18.77■□□□□ 0.6
CBX4-203ENST00000494546 RPS29P62273 56 aaKnown RBP18.77■□□□□ 0.6
CBX4-203ENST00000494546 SPRR1BP22528 89 aa18.75■□□□□ 0.59
CBX4-203ENST00000494546 SLC25A34Q6PIV7 304 aa18.74■□□□□ 0.59
CBX4-203ENST00000494546 Q8N377 158 aa18.74■□□□□ 0.59
CBX4-203ENST00000494546 HSBP1L1C9JCN9 74 aa18.73■□□□□ 0.59
CBX4-203ENST00000494546 MUC2Q02817 5179 aa18.71■□□□□ 0.59
CBX4-203ENST00000494546 TRBV7-6A0A0J9YX20 115 aa18.71■□□□□ 0.59
CBX4-203ENST00000494546 LAMTOR3Q9UHA4 124 aa18.7■□□□□ 0.58
CBX4-203ENST00000494546 SLC25A20O43772 301 aa18.69■□□□□ 0.58
CBX4-203ENST00000494546 TAL2Q16559 108 aa18.69■□□□□ 0.58
CBX4-203ENST00000494546 DEFB105AQ8NG35 78 aa18.69■□□□□ 0.58
CBX4-203ENST00000494546 A0A1B0GWB2 263 aa18.68■□□□□ 0.58
CBX4-203ENST00000494546 KRTAP13-3Q3SY46 172 aa18.68■□□□□ 0.58
CBX4-203ENST00000494546 TRAV13-2A0A0B4J235 113 aa18.66■□□□□ 0.58
CBX4-203ENST00000494546 A0A0U1RQV1 116 aa18.64■□□□□ 0.57
CBX4-203ENST00000494546 Q1RN00 199 aa18.62■□□□□ 0.57
CBX4-203ENST00000494546 TEX49A0A1B0GTD5 131 aa18.6■□□□□ 0.57
CBX4-203ENST00000494546 HRCT1Q6UXD1 115 aa18.6■□□□□ 0.57
CBX4-203ENST00000494546 SMIM11BQ8TCY0 68 aa18.6■□□□□ 0.57
CBX4-203ENST00000494546 SCGB1D1O95968 90 aa18.59■□□□□ 0.57
CBX4-203ENST00000494546 A4D1N5 150 aa18.56■□□□□ 0.56
CBX4-203ENST00000494546 MUC17Q685J3 4493 aa18.56■□□□□ 0.56
CBX4-203ENST00000494546 LIMD2Q9BT23 127 aa18.52■□□□□ 0.56
CBX4-203ENST00000494546 LINC01547P58512 204 aaPredicted RBP18.51■□□□□ 0.55
CBX4-203ENST00000494546 NHP2Q9NX24 153 aaKnown RBP18.51■□□□□ 0.55
CBX4-203ENST00000494546 IGLV5-48A0A075B6I7 105 aa18.5■□□□□ 0.55
CBX4-203ENST00000494546 PRO1933Q9H354 126 aa18.5■□□□□ 0.55
CBX4-203ENST00000494546 SMIM29Q86T20 159 aa18.49■□□□□ 0.55
CBX4-203ENST00000494546 VAMP3Q15836 100 aa18.46■□□□□ 0.55
CBX4-203ENST00000494546 HIST1H4GQ99525 98 aa18.44■□□□□ 0.54
CBX4-203ENST00000494546 COX8AP10176 69 aa18.42■□□□□ 0.54
CBX4-203ENST00000494546 CD164Q04900 197 aa18.42■□□□□ 0.54
CBX4-203ENST00000494546 ASB16-AS1Q495Z4 193 aa18.41■□□□□ 0.54
CBX4-203ENST00000494546 C12orf57Q99622 126 aa18.41■□□□□ 0.54
CBX4-203ENST00000494546 H7C2G1 150 aa18.4■□□□□ 0.54
CBX4-203ENST00000494546 LINC00575Q6W349 94 aa18.38■□□□□ 0.53
CBX4-203ENST00000494546 A0A0G2JQZ4 141 aa18.37■□□□□ 0.53
CBX4-203ENST00000494546 SEC61BP60468 96 aaKnown RBP18.36■□□□□ 0.53
CBX4-203ENST00000494546 DLEU1O43261 78 aa18.33■□□□□ 0.52
CBX4-203ENST00000494546 hADV29S1A0JD25 119 aa18.32■□□□□ 0.52
CBX4-203ENST00000494546 XP32Q5T750 250 aa18.32■□□□□ 0.52
CBX4-203ENST00000494546 C14orf144Q96I85 54 aa18.32■□□□□ 0.52
CBX4-203ENST00000494546 PAM16Q9Y3D7 125 aa18.31■□□□□ 0.52
CBX4-203ENST00000494546 Q6ZQY7 126 aa18.3■□□□□ 0.52
CBX4-203ENST00000494546 F8WEM9 126 aa18.28■□□□□ 0.52
CBX4-203ENST00000494546 SPATA45Q537H7 98 aa18.28■□□□□ 0.52
CBX4-203ENST00000494546 FAT4Q6V0I7 4981 aa18.25■□□□□ 0.51
CBX4-203ENST00000494546 Q5XG85 94 aa18.25■□□□□ 0.51
CBX4-203ENST00000494546 BVES-AS1Q5T3Y7 98 aa18.24■□□□□ 0.51
CBX4-203ENST00000494546 C9orf92A6NGG3 77 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms