RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
CHD1L-208ENST00000488864 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
CHD1L-208ENST00000488864 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
CHD1L-208ENST00000488864 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
CHD1L-208ENST00000488864 C10orf25Q5T742 122 aa8.8□□□□□ -1
CHD1L-208ENST00000488864 C6orf223Q8N319 242 aa8.8□□□□□ -1
CHD1L-208ENST00000488864 LAMTOR3Q9UHA4 124 aa8.8□□□□□ -1
CHD1L-208ENST00000488864 KMT2AQ03164 3969 aa8.8□□□□□ -1
CHD1L-208ENST00000488864 LINC01547P58512 204 aaPredicted RBP8.8□□□□□ -1
CHD1L-208ENST00000488864 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
CHD1L-208ENST00000488864 VPS13DQ5THJ4 4388 aa8.79□□□□□ -1
CHD1L-208ENST00000488864 LOC110117498A0A087WWA1 95 aa8.79□□□□□ -1
CHD1L-208ENST00000488864 HAMPP81172 84 aa8.79□□□□□ -1
CHD1L-208ENST00000488864 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
CHD1L-208ENST00000488864 Q6ZVQ6 151 aa8.78□□□□□ -1
CHD1L-208ENST00000488864 PRR34Q9NV39 138 aa8.78□□□□□ -1
CHD1L-208ENST00000488864 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
CHD1L-208ENST00000488864 FAM236CP0DP71 79 aa8.78□□□□□ -1
CHD1L-208ENST00000488864 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
CHD1L-208ENST00000488864 H7BZZ5 65 aa8.77□□□□□ -1.01
CHD1L-208ENST00000488864 TRAV7A0A075B6U4 112 aa8.76□□□□□ -1.01
CHD1L-208ENST00000488864 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
CHD1L-208ENST00000488864 Q6ZQY7 126 aa8.76□□□□□ -1.01
CHD1L-208ENST00000488864 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
CHD1L-208ENST00000488864 LY6G6CO95867 125 aa8.75□□□□□ -1.01
CHD1L-208ENST00000488864 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
CHD1L-208ENST00000488864 IGLV6-57P01721 117 aa8.74□□□□□ -1.01
CHD1L-208ENST00000488864 RMI2Q96E14 147 aa8.74□□□□□ -1.01
CHD1L-208ENST00000488864 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
CHD1L-208ENST00000488864 SPAG11BQ08648 103 aa8.73□□□□□ -1.01
CHD1L-208ENST00000488864 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
CHD1L-208ENST00000488864 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
CHD1L-208ENST00000488864 BCE1O60756 84 aa8.72□□□□□ -1.01
CHD1L-208ENST00000488864 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
CHD1L-208ENST00000488864 NBDYA0A0U1RRE5 68 aa8.71□□□□□ -1.02
CHD1L-208ENST00000488864 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
CHD1L-208ENST00000488864 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.02
CHD1L-208ENST00000488864 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
CHD1L-208ENST00000488864 CXCL6P80162 114 aa8.7□□□□□ -1.02
CHD1L-208ENST00000488864 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
CHD1L-208ENST00000488864 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
CHD1L-208ENST00000488864 F8WEM9 126 aa8.69□□□□□ -1.02
CHD1L-208ENST00000488864 HYDINQ4G0P3 5121 aa8.68□□□□□ -1.02
CHD1L-208ENST00000488864 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
CHD1L-208ENST00000488864 PDE6GP18545 87 aa8.66□□□□□ -1.02
CHD1L-208ENST00000488864 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
CHD1L-208ENST00000488864 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
CHD1L-208ENST00000488864 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
CHD1L-208ENST00000488864 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
CHD1L-208ENST00000488864 COX7BP24311 80 aa8.65□□□□□ -1.02
CHD1L-208ENST00000488864 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.03
CHD1L-208ENST00000488864 ALMS1Q8TCU4 4167 aa8.64□□□□□ -1.03
CHD1L-208ENST00000488864 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
CHD1L-208ENST00000488864 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.64□□□□□ -1.03
CHD1L-208ENST00000488864 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
CHD1L-208ENST00000488864 PSCAO43653 123 aa8.63□□□□□ -1.03
CHD1L-208ENST00000488864 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
CHD1L-208ENST00000488864 H3BQ85 93 aa8.62□□□□□ -1.03
CHD1L-208ENST00000488864 ELOF1P60002 83 aaKnown RBP8.62□□□□□ -1.03
CHD1L-208ENST00000488864 Q6ZR54 194 aa8.62□□□□□ -1.03
CHD1L-208ENST00000488864 Q8N9L7 120 aa8.62□□□□□ -1.03
CHD1L-208ENST00000488864 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
CHD1L-208ENST00000488864 KMT2CQ8NEZ4 4911 aaKnown RBP8.62□□□□□ -1.03
CHD1L-208ENST00000488864 NREPQ16612 68 aa8.61□□□□□ -1.03
CHD1L-208ENST00000488864 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
CHD1L-208ENST00000488864 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
CHD1L-208ENST00000488864 TRBV7-6A0A0J9YX20 115 aa8.6□□□□□ -1.03
CHD1L-208ENST00000488864 BPY2O14599 106 aa8.6□□□□□ -1.03
CHD1L-208ENST00000488864 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
CHD1L-208ENST00000488864 VPREB1P12018 145 aa8.59□□□□□ -1.03
CHD1L-208ENST00000488864 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
CHD1L-208ENST00000488864 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
CHD1L-208ENST00000488864 IGKV4-1P06312 121 aa8.56□□□□□ -1.04
CHD1L-208ENST00000488864 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
CHD1L-208ENST00000488864 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
CHD1L-208ENST00000488864 DNAH6Q9C0G6 4158 aa8.56□□□□□ -1.04
CHD1L-208ENST00000488864 NDUFC1O43677 76 aa8.56□□□□□ -1.04
CHD1L-208ENST00000488864 CAMK2N2Q96S95 79 aa8.55□□□□□ -1.04
CHD1L-208ENST00000488864 LCE6AA0A183 80 aa8.54□□□□□ -1.04
CHD1L-208ENST00000488864 M0R378 163 aa8.54□□□□□ -1.04
CHD1L-208ENST00000488864 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
CHD1L-208ENST00000488864 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
CHD1L-208ENST00000488864 Q6ZRU5 148 aa8.54□□□□□ -1.04
CHD1L-208ENST00000488864 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
CHD1L-208ENST00000488864 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
CHD1L-208ENST00000488864 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
CHD1L-208ENST00000488864 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.05
CHD1L-208ENST00000488864 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.05
CHD1L-208ENST00000488864 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHD1L-208ENST00000488864 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
CHD1L-208ENST00000488864 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
CHD1L-208ENST00000488864 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
CHD1L-208ENST00000488864 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
CHD1L-208ENST00000488864 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
CHD1L-208ENST00000488864 RTL8CO15255 209 aa8.5□□□□□ -1.05
CHD1L-208ENST00000488864 A0A087WTM6 91 aa8.49□□□□□ -1.05
CHD1L-208ENST00000488864 PRYO14603 147 aa8.49□□□□□ -1.05
CHD1L-208ENST00000488864 TNP2Q05952 138 aa8.49□□□□□ -1.05
CHD1L-208ENST00000488864 RYR2Q92736 4967 aa8.49□□□□□ -1.05
CHD1L-208ENST00000488864 HIGD2AQ9BW72 106 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms