RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
ITGB1-215ENST00000488494 Q6ZRX8 168 aa10.26□□□□□ -0.77
ITGB1-215ENST00000488494 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
ITGB1-215ENST00000488494 TIMM17BO60830 172 aa10.24□□□□□ -0.77
ITGB1-215ENST00000488494 ERC2-IT1O76042 136 aa10.24□□□□□ -0.77
ITGB1-215ENST00000488494 Q9BRP9 147 aa10.24□□□□□ -0.77
ITGB1-215ENST00000488494 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
ITGB1-215ENST00000488494 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
ITGB1-215ENST00000488494 GAGE2AQ6NT46 116 aa10.22□□□□□ -0.77
ITGB1-215ENST00000488494 Q8NBF4 154 aa10.22□□□□□ -0.77
ITGB1-215ENST00000488494 C20orf202A1L168 122 aa10.21□□□□□ -0.77
ITGB1-215ENST00000488494 ZNF73O43830 326 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-215ENST00000488494 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
ITGB1-215ENST00000488494 CTAG1AP78358 180 aa10.2□□□□□ -0.78
ITGB1-215ENST00000488494 SPAG11AQ6PDA7 123 aa10.19□□□□□ -0.78
ITGB1-215ENST00000488494 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-215ENST00000488494 ATOH7Q8N100 152 aa10.18□□□□□ -0.78
ITGB1-215ENST00000488494 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
ITGB1-215ENST00000488494 MOBPQ13875 183 aa10.17□□□□□ -0.78
ITGB1-215ENST00000488494 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
ITGB1-215ENST00000488494 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
ITGB1-215ENST00000488494 OR13C6PQ8NH95 151 aa10.17□□□□□ -0.78
ITGB1-215ENST00000488494 SCGB1D4Q6XE38 83 aa10.16□□□□□ -0.78
ITGB1-215ENST00000488494 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
ITGB1-215ENST00000488494 IGLV7-46A0A075B6I9 117 aa10.15□□□□□ -0.78
ITGB1-215ENST00000488494 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
ITGB1-215ENST00000488494 TPRXLQ17RH7 258 aa10.13□□□□□ -0.79
ITGB1-215ENST00000488494 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
ITGB1-215ENST00000488494 MUC2Q02817 5179 aa10.13□□□□□ -0.79
ITGB1-215ENST00000488494 HINT1P49773 126 aaPredicted RBP10.12□□□□□ -0.79
ITGB1-215ENST00000488494 SPINK1P00995 79 aa10.1□□□□□ -0.79
ITGB1-215ENST00000488494 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
ITGB1-215ENST00000488494 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
ITGB1-215ENST00000488494 AKR1D1P51857 326 aa10.09□□□□□ -0.79
ITGB1-215ENST00000488494 C9orf153Q5TBE3 101 aa10.09□□□□□ -0.79
ITGB1-215ENST00000488494 LINC00518Q8N0U6 118 aa10.09□□□□□ -0.79
ITGB1-215ENST00000488494 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
ITGB1-215ENST00000488494 FP248Q71RG6 208 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-215ENST00000488494 HIST1H2BLQ99880 126 aa10.08□□□□□ -0.8
ITGB1-215ENST00000488494 S100A1P23297 94 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 S100A2P29034 98 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 DHRS4-AS1Q9P1J3 65 aa10.07□□□□□ -0.8
ITGB1-215ENST00000488494 IFITM1P13164 125 aa10.06□□□□□ -0.8
ITGB1-215ENST00000488494 COX7BP24311 80 aa10.06□□□□□ -0.8
ITGB1-215ENST00000488494 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
ITGB1-215ENST00000488494 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
ITGB1-215ENST00000488494 Q6ZVH6 145 aa10.04□□□□□ -0.8
ITGB1-215ENST00000488494 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
ITGB1-215ENST00000488494 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
ITGB1-215ENST00000488494 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
ITGB1-215ENST00000488494 A6NDN8 102 aa10.02□□□□□ -0.81
ITGB1-215ENST00000488494 Q8N377 158 aa10.02□□□□□ -0.81
ITGB1-215ENST00000488494 SPRR1BP22528 89 aa10.01□□□□□ -0.81
ITGB1-215ENST00000488494 S100A6P06703 90 aa10□□□□□ -0.81
ITGB1-215ENST00000488494 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
ITGB1-215ENST00000488494 HSBP1L1C9JCN9 74 aa9.99□□□□□ -0.81
ITGB1-215ENST00000488494 KRTAP13-3Q3SY46 172 aa9.99□□□□□ -0.81
ITGB1-215ENST00000488494 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
ITGB1-215ENST00000488494 SLC25A20O43772 301 aa9.98□□□□□ -0.81
ITGB1-215ENST00000488494 MUC17Q685J3 4493 aa9.98□□□□□ -0.81
ITGB1-215ENST00000488494 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
ITGB1-215ENST00000488494 A0A0U1RQV1 116 aa9.96□□□□□ -0.82
ITGB1-215ENST00000488494 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.82
ITGB1-215ENST00000488494 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
ITGB1-215ENST00000488494 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
ITGB1-215ENST00000488494 Q1RN00 199 aa9.95□□□□□ -0.82
ITGB1-215ENST00000488494 TAL2Q16559 108 aa9.94□□□□□ -0.82
ITGB1-215ENST00000488494 HRCT1Q6UXD1 115 aa9.93□□□□□ -0.82
ITGB1-215ENST00000488494 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
ITGB1-215ENST00000488494 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
ITGB1-215ENST00000488494 FAT4Q6V0I7 4981 aa9.91□□□□□ -0.82
ITGB1-215ENST00000488494 SCGB1D1O95968 90 aa9.91□□□□□ -0.82
ITGB1-215ENST00000488494 A4D1N5 150 aa9.9□□□□□ -0.82
ITGB1-215ENST00000488494 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
ITGB1-215ENST00000488494 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
ITGB1-215ENST00000488494 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-215ENST00000488494 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
ITGB1-215ENST00000488494 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
ITGB1-215ENST00000488494 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
ITGB1-215ENST00000488494 C12orf57Q99622 126 aa9.85□□□□□ -0.83
ITGB1-215ENST00000488494 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
ITGB1-215ENST00000488494 COX8AP10176 69 aa9.83□□□□□ -0.84
ITGB1-215ENST00000488494 CD164Q04900 197 aa9.83□□□□□ -0.84
ITGB1-215ENST00000488494 VAMP3Q15836 100 aa9.83□□□□□ -0.84
ITGB1-215ENST00000488494 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
ITGB1-215ENST00000488494 H7C2G1 150 aa9.82□□□□□ -0.84
ITGB1-215ENST00000488494 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
ITGB1-215ENST00000488494 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
ITGB1-215ENST00000488494 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
ITGB1-215ENST00000488494 XP32Q5T750 250 aa9.8□□□□□ -0.84
ITGB1-215ENST00000488494 Q6ZQY7 126 aa9.78□□□□□ -0.84
ITGB1-215ENST00000488494 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
ITGB1-215ENST00000488494 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
ITGB1-215ENST00000488494 F8WEM9 126 aa9.77□□□□□ -0.85
ITGB1-215ENST00000488494 DLEU1O43261 78 aa9.77□□□□□ -0.85
ITGB1-215ENST00000488494 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
ITGB1-215ENST00000488494 C14orf144Q96I85 54 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms