RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
COPS3-209ENST00000486810 TOMM7Q9P0U1 55 aa3.14□□□□□ -1.91
COPS3-209ENST00000486810 ANKRD17O75179 2603 aaKnown RBP3.13□□□□□ -1.91
COPS3-209ENST00000486810 Q96NJ1 140 aa3.13□□□□□ -1.91
COPS3-209ENST00000486810 ICE1Q9Y2F5 2266 aa3.12□□□□□ -1.91
COPS3-209ENST00000486810 TECTAO75443 2155 aa3.11□□□□□ -1.91
COPS3-209ENST00000486810 A0A1B0GU33 70 aa3.11□□□□□ -1.91
COPS3-209ENST00000486810 C4orf3Q8WVX3 66 aa3.11□□□□□ -1.91
COPS3-209ENST00000486810 PATE1Q8WXA2 126 aa3.11□□□□□ -1.91
COPS3-209ENST00000486810 CCL19Q99731 98 aa3.11□□□□□ -1.91
COPS3-209ENST00000486810 IGKV2-24A0A0C4DH68 120 aa3.1□□□□□ -1.91
COPS3-209ENST00000486810 NBDYA0A0U1RRE5 68 aa3.1□□□□□ -1.91
COPS3-209ENST00000486810 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
COPS3-209ENST00000486810 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
COPS3-209ENST00000486810 CUL9Q8IWT3 2517 aa3.09□□□□□ -1.91
COPS3-209ENST00000486810 KRTAP13-3Q3SY46 172 aa3.09□□□□□ -1.91
COPS3-209ENST00000486810 MINOS1Q5TGZ0 78 aa3.09□□□□□ -1.91
COPS3-209ENST00000486810 MGAQ8IWI9 3026 aa3.09□□□□□ -1.92
COPS3-209ENST00000486810 A8MTW9 85 aa3.08□□□□□ -1.92
COPS3-209ENST00000486810 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
COPS3-209ENST00000486810 WFDC10BQ8IUB3 73 aa3.08□□□□□ -1.92
COPS3-209ENST00000486810 ATRXP46100 2492 aa3.08□□□□□ -1.92
COPS3-209ENST00000486810 WNK2Q9Y3S1 2297 aa3.07□□□□□ -1.92
COPS3-209ENST00000486810 GVQW2A0A096LPI5 108 aaPredicted RBP3.07□□□□□ -1.92
COPS3-209ENST00000486810 LY6G6CO95867 125 aa3.07□□□□□ -1.92
COPS3-209ENST00000486810 DEFB116Q30KQ4 102 aa3.06□□□□□ -1.92
COPS3-209ENST00000486810 C16orf74Q96GX8 76 aa3.06□□□□□ -1.92
COPS3-209ENST00000486810 DEFB131AP59861 70 aa3.05□□□□□ -1.92
COPS3-209ENST00000486810 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
COPS3-209ENST00000486810 C5orf56Q8N8D9 126 aa3.05□□□□□ -1.92
COPS3-209ENST00000486810 C6orf48Q9UBA6 75 aa3.05□□□□□ -1.92
COPS3-209ENST00000486810 COL6A3P12111 3177 aa3.05□□□□□ -1.92
COPS3-209ENST00000486810 A0A0G2JQZ4 141 aa3.04□□□□□ -1.92
COPS3-209ENST00000486810 A0A1W2PNN7 141 aa3.04□□□□□ -1.92
COPS3-209ENST00000486810 SPTY2D1-AS1A0A0U1RR47 76 aa3.03□□□□□ -1.92
COPS3-209ENST00000486810 DEFB108BQ8NET1 73 aa3.03□□□□□ -1.92
COPS3-209ENST00000486810 WDR87Q6ZQQ6 2873 aa3.03□□□□□ -1.92
COPS3-209ENST00000486810 CNOT1A5YKK6 2376 aaKnown RBP3.03□□□□□ -1.92
COPS3-209ENST00000486810 TRIOBPQ9H2D6 2365 aa3.02□□□□□ -1.93
COPS3-209ENST00000486810 SSBP3-AS1Q7Z2R9 100 aa3.02□□□□□ -1.93
COPS3-209ENST00000486810 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
COPS3-209ENST00000486810 DEFB1P60022 68 aa3.01□□□□□ -1.93
COPS3-209ENST00000486810 CEP350Q5VT06 3117 aa3□□□□□ -1.93
COPS3-209ENST00000486810 CLPSL2Q6UWE3 100 aa3□□□□□ -1.93
COPS3-209ENST00000486810 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
COPS3-209ENST00000486810 H3BUA1 57 aa2.99□□□□□ -1.93
COPS3-209ENST00000486810 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
COPS3-209ENST00000486810 USMG5Q96IX5 58 aa2.99□□□□□ -1.93
COPS3-209ENST00000486810 RHPN1-AS1Q9BWJ2 59 aa2.99□□□□□ -1.93
COPS3-209ENST00000486810 SPINK13Q1W4C9 94 aa2.98□□□□□ -1.93
COPS3-209ENST00000486810 PSORS1C2Q9UIG4 136 aa2.98□□□□□ -1.93
COPS3-209ENST00000486810 CHD7Q9P2D1 2997 aa2.97□□□□□ -1.93
COPS3-209ENST00000486810 SPTBN1Q01082 2364 aaKnown RBP2.97□□□□□ -1.93
COPS3-209ENST00000486810 TPRXLQ17RH7 258 aa2.97□□□□□ -1.93
COPS3-209ENST00000486810 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.94
COPS3-209ENST00000486810 COL6A6A6NMZ7 2263 aa2.95□□□□□ -1.94
COPS3-209ENST00000486810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.95□□□□□ -1.943e-6■■■■■ 29.1
COPS3-209ENST00000486810 H0YAA0 97 aa2.95□□□□□ -1.94
COPS3-209ENST00000486810 DEFB109BQ30KR1 87 aa2.95□□□□□ -1.94
COPS3-209ENST00000486810 IGFL1Q6UW32 110 aa2.95□□□□□ -1.94
COPS3-209ENST00000486810 MRPL34Q9BQ48 92 aaKnown RBP2.95□□□□□ -1.94
COPS3-209ENST00000486810 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 SPRR1AP35321 89 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 UNQ6190/PRO20217Q6UXQ8 127 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 Q6ZRX8 168 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 Q6ZSA8 131 aa2.94□□□□□ -1.94
COPS3-209ENST00000486810 CACNA1BQ00975 2339 aa2.93□□□□□ -1.94
COPS3-209ENST00000486810 G3V318 75 aa2.93□□□□□ -1.94
COPS3-209ENST00000486810 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
COPS3-209ENST00000486810 WNK1Q9H4A3 2382 aa2.92□□□□□ -1.94
COPS3-209ENST00000486810 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
COPS3-209ENST00000486810 GOLGB1Q14789 3259 aaKnown RBP2.92□□□□□ -1.94
COPS3-209ENST00000486810 SRCAPQ6ZRS2 3230 aa2.91□□□□□ -1.94
COPS3-209ENST00000486810 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.94
COPS3-209ENST00000486810 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
COPS3-209ENST00000486810 CRIPTQ9P021 101 aa2.9□□□□□ -1.95
COPS3-209ENST00000486810 CACNA1GO43497 2377 aa2.88□□□□□ -1.95
COPS3-209ENST00000486810 HTN1P15515 57 aa2.88□□□□□ -1.95
COPS3-209ENST00000486810 CACNA1EQ15878 2313 aa2.87□□□□□ -1.95
COPS3-209ENST00000486810 TPRP12270 2363 aaKnown RBP2.87□□□□□ -1.95
COPS3-209ENST00000486810 SPRR1BP22528 89 aa2.87□□□□□ -1.95
COPS3-209ENST00000486810 R4GN34 69 aa2.87□□□□□ -1.95
COPS3-209ENST00000486810 IGF2RP11717 2491 aa2.87□□□□□ -1.95
COPS3-209ENST00000486810 CENPFP49454 3210 aa2.86□□□□□ -1.95
COPS3-209ENST00000486810 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
COPS3-209ENST00000486810 DEFB119Q8N690 84 aa2.86□□□□□ -1.95
COPS3-209ENST00000486810 PCNTO95613 3336 aa2.85□□□□□ -1.95
COPS3-209ENST00000486810 H3BUX3 64 aa2.85□□□□□ -1.95
COPS3-209ENST00000486810 DEFB133Q30KQ1 61 aa2.85□□□□□ -1.95
COPS3-209ENST00000486810 TNRC18O15417 2968 aaPredicted RBP2.84□□□□□ -1.95
COPS3-209ENST00000486810 INE1O15225 51 aa2.84□□□□□ -1.95
COPS3-209ENST00000486810 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
COPS3-209ENST00000486810 ZDBF2Q9HCK1 2354 aa2.83□□□□□ -1.96
COPS3-209ENST00000486810 LY6EQ16553 131 aa2.83□□□□□ -1.96
COPS3-209ENST00000486810 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
COPS3-209ENST00000486810 NBEAQ8NFP9 2946 aa2.83□□□□□ -1.96
COPS3-209ENST00000486810 OTOGQ6ZRI0 2925 aa2.82□□□□□ -1.96
COPS3-209ENST00000486810 DEFB130BP0DP73 79 aa2.82□□□□□ -1.96
COPS3-209ENST00000486810 DEFB130AP0DP74 79 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms