RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRYO14603 147 aa8.92□□□□□ -0.98
CLK3-204ENST00000483723 SPRR1AP35321 89 aa8.92□□□□□ -0.98
CLK3-204ENST00000483723 FAM19A5Q7Z5A7 132 aaPredicted RBP8.92□□□□□ -0.98
CLK3-204ENST00000483723 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
CLK3-204ENST00000483723 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
CLK3-204ENST00000483723 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
CLK3-204ENST00000483723 DNAH6Q9C0G6 4158 aa8.91□□□□□ -0.98
CLK3-204ENST00000483723 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
CLK3-204ENST00000483723 KRTAP4-16G5E9R7 235 aaPredicted RBP8.91□□□□□ -0.98
CLK3-204ENST00000483723 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
CLK3-204ENST00000483723 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
CLK3-204ENST00000483723 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
CLK3-204ENST00000483723 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
CLK3-204ENST00000483723 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
CLK3-204ENST00000483723 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
CLK3-204ENST00000483723 ALMS1Q8TCU4 4167 aa8.88□□□□□ -0.99
CLK3-204ENST00000483723 TMEM256-PLSCR3K7ERE1 68 aa8.87□□□□□ -0.99
CLK3-204ENST00000483723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.87□□□□□ -0.99
CLK3-204ENST00000483723 B5MCH6 92 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 H3BQ85 93 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 RTL8CO15255 209 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 PANO1I0J062 215 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 TNP2Q05952 138 aa8.85□□□□□ -0.99
CLK3-204ENST00000483723 DNAH2Q9P225 4427 aa8.84□□□□□ -0.99
CLK3-204ENST00000483723 RYR3Q15413 4870 aa8.84□□□□□ -0.99
CLK3-204ENST00000483723 Q6ZQY7 126 aa8.84□□□□□ -0.99
CLK3-204ENST00000483723 Q6ZRX8 168 aa8.84□□□□□ -0.99
CLK3-204ENST00000483723 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
CLK3-204ENST00000483723 REG3GQ6UW15 175 aa8.83□□□□□ -1
CLK3-204ENST00000483723 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
CLK3-204ENST00000483723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
CLK3-204ENST00000483723 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
CLK3-204ENST00000483723 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
CLK3-204ENST00000483723 GHRHP01286 108 aa8.81□□□□□ -1
CLK3-204ENST00000483723 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
CLK3-204ENST00000483723 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
CLK3-204ENST00000483723 FUSP35637 526 aaKnown RBP eCLIP8.8□□□□□ -1
CLK3-204ENST00000483723 Q9BRP9 147 aa8.8□□□□□ -1
CLK3-204ENST00000483723 JMJD7-PLA2G4BH0Y9G9 81 aa8.8□□□□□ -1
CLK3-204ENST00000483723 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
CLK3-204ENST00000483723 VPS25Q9BRG1 176 aa8.8□□□□□ -1
CLK3-204ENST00000483723 LCE6AA0A183 80 aa8.78□□□□□ -1
CLK3-204ENST00000483723 FAM240AA0A1B0GVK7 77 aa8.78□□□□□ -1
CLK3-204ENST00000483723 CDIP1Q9H305 208 aa8.78□□□□□ -1
CLK3-204ENST00000483723 DPH3Q96FX2 82 aa8.77□□□□□ -1.01
CLK3-204ENST00000483723 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
CLK3-204ENST00000483723 H0Y9J4 135 aa8.75□□□□□ -1.01
CLK3-204ENST00000483723 LINC01547P58512 204 aaPredicted RBP8.75□□□□□ -1.01
CLK3-204ENST00000483723 UBE2BP63146 152 aa8.75□□□□□ -1.01
CLK3-204ENST00000483723 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
CLK3-204ENST00000483723 ACYP1P07311 99 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 SMCR5Q8TEV8 140 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 FAM19A1Q7Z5A9 133 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 Q8N377 158 aa8.74□□□□□ -1.01
CLK3-204ENST00000483723 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
CLK3-204ENST00000483723 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
CLK3-204ENST00000483723 RYR2Q92736 4967 aa8.72□□□□□ -1.01
CLK3-204ENST00000483723 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
CLK3-204ENST00000483723 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
CLK3-204ENST00000483723 CCKP06307 115 aa8.71□□□□□ -1.01
CLK3-204ENST00000483723 LOC110117498A0A087WWA1 95 aa8.71□□□□□ -1.02
CLK3-204ENST00000483723 BCE1O60756 84 aa8.7□□□□□ -1.02
CLK3-204ENST00000483723 PRLHP81277 87 aa8.7□□□□□ -1.02
CLK3-204ENST00000483723 ST20-AS1Q8NBB2 130 aa8.7□□□□□ -1.02
CLK3-204ENST00000483723 HECTD4Q9Y4D8 3996 aa8.7□□□□□ -1.02
CLK3-204ENST00000483723 KRTAP13-1Q8IUC0 172 aa8.69□□□□□ -1.02
CLK3-204ENST00000483723 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
CLK3-204ENST00000483723 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 Q6ZQT0 140 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 HYDINQ4G0P3 5121 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 A0A1B0GV72 72 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 PDE6GP18545 87 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
CLK3-204ENST00000483723 DNAH11Q96DT5 4516 aa8.67□□□□□ -1.02
CLK3-204ENST00000483723 XGP55808 180 aa8.66□□□□□ -1.02
CLK3-204ENST00000483723 Q6ZSA8 131 aa8.66□□□□□ -1.02
CLK3-204ENST00000483723 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
CLK3-204ENST00000483723 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
CLK3-204ENST00000483723 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.03
CLK3-204ENST00000483723 UBE2AP49459 152 aa8.64□□□□□ -1.03
CLK3-204ENST00000483723 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
CLK3-204ENST00000483723 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
CLK3-204ENST00000483723 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
CLK3-204ENST00000483723 SPRR1BP22528 89 aa8.63□□□□□ -1.03
CLK3-204ENST00000483723 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
CLK3-204ENST00000483723 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
CLK3-204ENST00000483723 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
CLK3-204ENST00000483723 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
CLK3-204ENST00000483723 LINC00846Q9NV44 126 aa8.62□□□□□ -1.03
CLK3-204ENST00000483723 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
CLK3-204ENST00000483723 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
CLK3-204ENST00000483723 DNAH8Q96JB1 4490 aa8.6□□□□□ -1.03
CLK3-204ENST00000483723 PKD1P98161 4303 aa8.6□□□□□ -1.03
CLK3-204ENST00000483723 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms