RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 IQGAP2Q13576 1575 aa1.84□□□□□ -2.12
R3HDM1-216ENST00000483065 TNRC6CQ9HCJ0 1690 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-216ENST00000483065 ABRACLQ9P1F3 81 aa1.82□□□□□ -2.12
R3HDM1-216ENST00000483065 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-216ENST00000483065 TMEM167BQ9NRX6 74 aa1.8□□□□□ -2.12
R3HDM1-216ENST00000483065 TOP2AP11388 1531 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-216ENST00000483065 ABCA5Q8WWZ7 1642 aa1.8□□□□□ -2.12
R3HDM1-216ENST00000483065 ASXL3Q9C0F0 2248 aa1.79□□□□□ -2.12
R3HDM1-216ENST00000483065 NRXN3Q9Y4C0 1643 aa1.79□□□□□ -2.12
R3HDM1-216ENST00000483065 SMIM27A0A1W2PRY6 76 aa1.78□□□□□ -2.12
R3HDM1-216ENST00000483065 LYNX1G3V0Z9 82 aa1.78□□□□□ -2.12
R3HDM1-216ENST00000483065 CRIP1P50238 77 aa1.78□□□□□ -2.12
R3HDM1-216ENST00000483065 JMJD1CQ15652 2540 aa1.78□□□□□ -2.12
R3HDM1-216ENST00000483065 CADP27708 2225 aa1.78□□□□□ -2.13
R3HDM1-216ENST00000483065 FAM208BQ5VWN6 2430 aa1.77□□□□□ -2.13
R3HDM1-216ENST00000483065 NDUFA3O95167 84 aa1.77□□□□□ -2.13
R3HDM1-216ENST00000483065 LINC00158P58513 81 aa1.77□□□□□ -2.13
R3HDM1-216ENST00000483065 ZDBF2Q9HCK1 2354 aa1.77□□□□□ -2.13
R3HDM1-216ENST00000483065 RP1L1Q8IWN7 2480 aaPredicted RBP1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 HIVEP2P31629 2446 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 NAV3Q8IVL0 2385 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 SPINK4O60575 86 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 DEFB105AQ8NG35 78 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 DEPDC5O75140 1603 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 AGLP35573 1532 aa1.76□□□□□ -2.13
R3HDM1-216ENST00000483065 KNTC1P50748 2209 aa1.75□□□□□ -2.13
R3HDM1-216ENST00000483065 TJP1Q07157 1748 aa1.75□□□□□ -2.13
R3HDM1-216ENST00000483065 SPRR1AP35321 89 aa1.75□□□□□ -2.13
R3HDM1-216ENST00000483065 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-216ENST00000483065 ANKRD36CQ5JPF3 1778 aa1.73□□□□□ -2.13
R3HDM1-216ENST00000483065 LINC01546A6NGU7 62 aa1.73□□□□□ -2.13
R3HDM1-216ENST00000483065 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
R3HDM1-216ENST00000483065 APLNQ9ULZ1 77 aa1.73□□□□□ -2.13
R3HDM1-216ENST00000483065 AHCTF1Q8WYP5 2266 aa1.73□□□□□ -2.13
R3HDM1-216ENST00000483065 SPRR1BP22528 89 aa1.72□□□□□ -2.13
R3HDM1-216ENST00000483065 GOLGA4Q13439 2230 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-216ENST00000483065 URB1O60287 2271 aaKnown RBP1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 TNCP24821 2201 aa1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 MINOS1Q5TGZ0 78 aa1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 FAM208AQ9UK61 1670 aaKnown RBP1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 SORL1Q92673 2214 aa1.7□□□□□ -2.14
R3HDM1-216ENST00000483065 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
R3HDM1-216ENST00000483065 CACNA1EQ15878 2313 aa1.67□□□□□ -2.14
R3HDM1-216ENST00000483065 PRB3Q04118 309 aaPredicted RBP1.66□□□□□ -2.14
R3HDM1-216ENST00000483065 H0YAA0 97 aa1.65□□□□□ -2.15
R3HDM1-216ENST00000483065 C6orf48Q9UBA6 75 aa1.65□□□□□ -2.15
R3HDM1-216ENST00000483065 C4AP0C0L4 1744 aa1.64□□□□□ -2.15
R3HDM1-216ENST00000483065 C4BP0C0L5 1744 aa1.64□□□□□ -2.15
R3HDM1-216ENST00000483065 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
R3HDM1-216ENST00000483065 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
R3HDM1-216ENST00000483065 ASH1LQ9NR48 2969 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-216ENST00000483065 IAPPP10997 89 aa1.62□□□□□ -2.15
R3HDM1-216ENST00000483065 TIMM8BQ9Y5J9 83 aaPredicted RBP1.62□□□□□ -2.15
R3HDM1-216ENST00000483065 OTOGLQ3ZCN5 2332 aa1.62□□□□□ -2.15
R3HDM1-216ENST00000483065 ROS1P08922 2347 aa1.61□□□□□ -2.15
R3HDM1-216ENST00000483065 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
R3HDM1-216ENST00000483065 ATP7AQ04656 1500 aa1.6□□□□□ -2.15
R3HDM1-216ENST00000483065 TOGARAM1Q9Y4F4 1720 aa1.58□□□□□ -2.16
R3HDM1-216ENST00000483065 DEFB109BQ30KR1 87 aa1.58□□□□□ -2.16
R3HDM1-216ENST00000483065 LELP1Q5T871 98 aa1.58□□□□□ -2.16
R3HDM1-216ENST00000483065 TRPM2O94759 1503 aa1.56□□□□□ -2.16
R3HDM1-216ENST00000483065 MROH2BQ7Z745 1585 aa1.56□□□□□ -2.16
R3HDM1-216ENST00000483065 SAMD9LQ8IVG5 1584 aa1.56□□□□□ -2.16
R3HDM1-216ENST00000483065 H3BUA1 57 aa1.56□□□□□ -2.16
R3HDM1-216ENST00000483065 KLK9Q2XQG4 91 aa1.56□□□□□ -2.16
R3HDM1-216ENST00000483065 COL6A6A6NMZ7 2263 aa1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 LOC730098B7Z3J9 87 aa1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 DEFB130BP0DP73 79 aa1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 DEFB130AP0DP74 79 aa1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
R3HDM1-216ENST00000483065 LMO7Q8WWI1 1683 aa1.54□□□□□ -2.16
R3HDM1-216ENST00000483065 CDC42BPAQ5VT25 1732 aa1.54□□□□□ -2.16
R3HDM1-216ENST00000483065 DDX60Q8IY21 1712 aaKnown RBP1.52□□□□□ -2.17
R3HDM1-216ENST00000483065 SPINK6Q6UWN8 80 aa1.52□□□□□ -2.17
R3HDM1-216ENST00000483065 CNOT1A5YKK6 2376 aaKnown RBP1.52□□□□□ -2.17
R3HDM1-216ENST00000483065 RPS27P42677 84 aaKnown RBP1.5□□□□□ -2.17
R3HDM1-216ENST00000483065 WT1-ASQ06250 92 aa1.5□□□□□ -2.17
R3HDM1-216ENST00000483065 RPS27LQ71UM5 84 aaKnown RBP1.5□□□□□ -2.17
R3HDM1-216ENST00000483065 PTPRQQ9UMZ3 2332 aa1.49□□□□□ -2.17
R3HDM1-216ENST00000483065 BPTFQ12830 3046 aa1.49□□□□□ -2.17
R3HDM1-216ENST00000483065 IQGAP1P46940 1657 aa1.48□□□□□ -2.17
R3HDM1-216ENST00000483065 PTPRZ1P23471 2315 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-216ENST00000483065 NFAT5O94916 1531 aa1.47□□□□□ -2.17
R3HDM1-216ENST00000483065 DOPEY2Q9Y3R5 2298 aa1.46□□□□□ -2.18
R3HDM1-216ENST00000483065 KIF21BO75037 1637 aa1.46□□□□□ -2.18
R3HDM1-216ENST00000483065 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
R3HDM1-216ENST00000483065 NDUFA1O15239 70 aa1.45□□□□□ -2.18
R3HDM1-216ENST00000483065 SPINK1P00995 79 aa1.45□□□□□ -2.18
R3HDM1-216ENST00000483065 SNRPGP62308 76 aaKnown RBP1.43□□□□□ -2.18
R3HDM1-216ENST00000483065 USF3Q68DE3 2245 aa1.43□□□□□ -2.18
R3HDM1-216ENST00000483065 TFF3Q07654 80 aa1.42□□□□□ -2.18
R3HDM1-216ENST00000483065 C2CD3Q4AC94 2353 aa1.41□□□□□ -2.18
R3HDM1-216ENST00000483065 TTC28Q96AY4 2481 aa1.41□□□□□ -2.18
R3HDM1-216ENST00000483065 SPTBN2O15020 2390 aa1.41□□□□□ -2.18
R3HDM1-216ENST00000483065 PLCE1Q9P212 2302 aa1.4□□□□□ -2.18
R3HDM1-216ENST00000483065 H0YGG7 62 aa1.4□□□□□ -2.19
R3HDM1-216ENST00000483065 WFDC10BQ8IUB3 73 aa1.4□□□□□ -2.19
R3HDM1-216ENST00000483065 HELZ2Q9BYK8 2649 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms