RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 SPATA3Q8NHX4 192 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 DIRC1Q969H9 104 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 Q9BRP9 147 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 CELA1Q9UNI1 258 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 MTORP42345 2549 aa4.87□□□□□ -1.63
PKP4-211ENST00000481115 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
PKP4-211ENST00000481115 LCA10Q71F78 164 aa4.87□□□□□ -1.63
PKP4-211ENST00000481115 LINC00269Q8N2A0 174 aa4.87□□□□□ -1.63
PKP4-211ENST00000481115 CELSR1Q9NYQ6 3014 aa4.86□□□□□ -1.63
PKP4-211ENST00000481115 LOC101927531A0A1B0GV80 90 aa4.86□□□□□ -1.63
PKP4-211ENST00000481115 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
PKP4-211ENST00000481115 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
PKP4-211ENST00000481115 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
PKP4-211ENST00000481115 TEP1Q99973 2627 aaKnown RBP4.85□□□□□ -1.63
PKP4-211ENST00000481115 A6NN06 94 aa4.85□□□□□ -1.63
PKP4-211ENST00000481115 ZNF73O43830 326 aaPredicted RBP4.85□□□□□ -1.63
PKP4-211ENST00000481115 IGHV3-11P01762 117 aa4.85□□□□□ -1.63
PKP4-211ENST00000481115 APOC4P55056 127 aa4.85□□□□□ -1.63
PKP4-211ENST00000481115 Q5VV11 94 aa4.85□□□□□ -1.63
PKP4-211ENST00000481115 UBE2E2Q96LR5 201 aa4.85□□□□□ -1.63
PKP4-211ENST00000481115 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
PKP4-211ENST00000481115 DEFB1P60022 68 aa4.84□□□□□ -1.63
PKP4-211ENST00000481115 PRB3Q04118 309 aaPredicted RBP4.84□□□□□ -1.63
PKP4-211ENST00000481115 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
PKP4-211ENST00000481115 CUBNO60494 3623 aa4.84□□□□□ -1.64
PKP4-211ENST00000481115 A0A1B0GUV1 79 aa4.83□□□□□ -1.64
PKP4-211ENST00000481115 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
PKP4-211ENST00000481115 INSP01308 110 aa4.83□□□□□ -1.64
PKP4-211ENST00000481115 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
PKP4-211ENST00000481115 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
PKP4-211ENST00000481115 TRGV2A0A075B6R0 118 aa4.82□□□□□ -1.64
PKP4-211ENST00000481115 HIGD2BQ4VC39 106 aa4.82□□□□□ -1.64
PKP4-211ENST00000481115 BRD3OSQ6XYD6 125 aa4.82□□□□□ -1.64
PKP4-211ENST00000481115 TOMM7Q9P0U1 55 aa4.82□□□□□ -1.64
PKP4-211ENST00000481115 IGHV3-73A0A0B4J1V6 119 aa4.81□□□□□ -1.64
PKP4-211ENST00000481115 C16orf90A8MZG2 172 aa4.81□□□□□ -1.64
PKP4-211ENST00000481115 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
PKP4-211ENST00000481115 A8MUN3 132 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 HCG22E2RYF7 251 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 PSPHP1O15172 72 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 DEFB112Q30KQ8 113 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 Q6ZQY7 126 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 KCNQ1DNQ9H478 68 aa4.8□□□□□ -1.64
PKP4-211ENST00000481115 LINC00959A0A1B0GUT2 108 aa4.79□□□□□ -1.64
PKP4-211ENST00000481115 A6NDX4 124 aa4.79□□□□□ -1.64
PKP4-211ENST00000481115 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
PKP4-211ENST00000481115 B9D2Q9BPU9 175 aa4.79□□□□□ -1.64
PKP4-211ENST00000481115 C2CD3Q4AC94 2353 aa4.79□□□□□ -1.64
PKP4-211ENST00000481115 JMJD1CQ15652 2540 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 IGKV3-7A0A075B6H7 116 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 GVQW2A0A096LPI5 108 aaPredicted RBP4.78□□□□□ -1.64
PKP4-211ENST00000481115 A0A0J9YWU9 116 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 C8orf87E5RJ46 101 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 M0R2N4 97 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 CMC4P56277 68 aaPredicted RBP4.78□□□□□ -1.64
PKP4-211ENST00000481115 KIAA0087Q14695 138 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
PKP4-211ENST00000481115 MXRA5Q9NR99 2828 aa4.78□□□□□ -1.65
PKP4-211ENST00000481115 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
PKP4-211ENST00000481115 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
PKP4-211ENST00000481115 MP68P56378 58 aa4.77□□□□□ -1.65
PKP4-211ENST00000481115 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
PKP4-211ENST00000481115 IGLV4-60A0A075B6I1 120 aa4.76□□□□□ -1.65
PKP4-211ENST00000481115 H3BUX3 64 aa4.76□□□□□ -1.65
PKP4-211ENST00000481115 IGKV3-20P01619 116 aa4.76□□□□□ -1.65
PKP4-211ENST00000481115 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
PKP4-211ENST00000481115 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.75□□□□□ -1.65
PKP4-211ENST00000481115 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
PKP4-211ENST00000481115 SETD2Q9BYW2 2564 aaPredicted RBP4.75□□□□□ -1.65
PKP4-211ENST00000481115 LY6EQ16553 131 aa4.74□□□□□ -1.65
PKP4-211ENST00000481115 C9orf116Q5BN46 136 aaPredicted RBP4.74□□□□□ -1.65
PKP4-211ENST00000481115 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
PKP4-211ENST00000481115 LINC01006Q8NI28 216 aa4.74□□□□□ -1.65
PKP4-211ENST00000481115 C16orf74Q96GX8 76 aa4.74□□□□□ -1.65
PKP4-211ENST00000481115 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
PKP4-211ENST00000481115 DEFB131AP59861 70 aa4.73□□□□□ -1.65
PKP4-211ENST00000481115 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
PKP4-211ENST00000481115 C11orf45Q8TAV5 145 aa4.73□□□□□ -1.65
PKP4-211ENST00000481115 SPRR4Q96PI1 79 aa4.73□□□□□ -1.65
PKP4-211ENST00000481115 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
PKP4-211ENST00000481115 TRGV1A0A0A0MS02 117 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 TRGV4A0A0C4DH28 118 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 A6NED7 52 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 C3orf84H3BNL1 204 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 CNBPP62633 177 aaKnown RBP4.72□□□□□ -1.65
PKP4-211ENST00000481115 ZNF702PQ9H963 129 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 ATRQ13535 2644 aa4.72□□□□□ -1.65
PKP4-211ENST00000481115 PRM2P04554 102 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 HTN1P15515 57 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 KRTAP24-1Q3LI83 254 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 LINC00612Q8N6U2 182 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
PKP4-211ENST00000481115 NIPBLQ6KC79 2804 aaeCLIP4.71□□□□□ -1.66
PKP4-211ENST00000481115 KRTAP21-3Q3LHN1 58 aa4.7□□□□□ -1.66
PKP4-211ENST00000481115 LRCOL1A6NCL2 159 aa4.69□□□□□ -1.66
PKP4-211ENST00000481115 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms