RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CHD8Q9HCK8 2581 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 PRRC2CQ9Y520 2896 aaKnown RBP2.59□□□□□ -1.99
CMSS1-204ENST00000479555 SDK2Q58EX2 2172 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 IGKV3-7A0A075B6H7 116 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 IGLV4-60A0A075B6I1 120 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
CMSS1-204ENST00000479555 FBXL19-AS1Q494R0 122 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 FAM215AQ9Y5M1 114 aa2.59□□□□□ -1.99
CMSS1-204ENST00000479555 NAV3Q8IVL0 2385 aa2.59□□□□□ -2
CMSS1-204ENST00000479555 NCOR2Q9Y618 2525 aa2.59□□□□□ -2
CMSS1-204ENST00000479555 ARFGEF3Q5TH69 2177 aa2.59□□□□□ -2
CMSS1-204ENST00000479555 KALRNO60229 2985 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 TRGV1A0A0A0MS02 117 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 LRCOL1A6NCL2 159 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 H0Y9P7 68 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 GIG44P09565 113 aaPredicted RBP2.58□□□□□ -2
CMSS1-204ENST00000479555 HTN1P15515 57 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 MOBPQ13875 183 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 KPRPQ5T749 579 aaPredicted RBP2.58□□□□□ -2
CMSS1-204ENST00000479555 FDCSPQ8NFU4 85 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 LINC01006Q8NI28 216 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 SPRR4Q96PI1 79 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 ZNF702PQ9H963 129 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 IGF2RP11717 2491 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 CACNA1AO00555 2505 aa2.58□□□□□ -2
CMSS1-204ENST00000479555 COL12A1Q99715 3063 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 MUC4Q99102 2169 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 H3BUX3 64 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 LINC00313P59037 77 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 COA5Q86WW8 74 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 ANKRD11Q6UB99 2663 aaPredicted RBP2.57□□□□□ -2
CMSS1-204ENST00000479555 DOCK10Q96BY6 2186 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 MED13Q9UHV7 2174 aa2.57□□□□□ -2
CMSS1-204ENST00000479555 MAP1BP46821 2468 aaKnown RBP2.57□□□□□ -2
CMSS1-204ENST00000479555 POLEQ07864 2286 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 DEFB131AP59861 70 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 DEFB112Q30KQ8 113 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 RELNP78509 3460 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 APC2O95996 2303 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 ATRXP46100 2492 aa2.56□□□□□ -2
CMSS1-204ENST00000479555 PIEZO2Q9H5I5 2752 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 DEFB131BA0A096LNP1 70 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 IGKV3OR2-268A0A0C4DH90 116 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 CACNA1GO43497 2377 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 ACACAQ13085 2346 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 C1orf137Q5JT78 98 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 ZGRF1Q86YA3 2104 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 Q8NAQ8 132 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 AHCTF1Q8WYP5 2266 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 PLAC8Q9NZF1 115 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 USP24Q9UPU5 2620 aa2.55□□□□□ -2
CMSS1-204ENST00000479555 A6NDX4 124 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 M0R2N4 97 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 DEFB1P60022 68 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 EGFEM1PQ0D2K5 195 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 C9orf163Q8N9P6 203 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 ACACBO00763 2458 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 TPRP12270 2363 aaKnown RBP2.54□□□□□ -2
CMSS1-204ENST00000479555 URB1O60287 2271 aaKnown RBP2.54□□□□□ -2
CMSS1-204ENST00000479555 ARHGAP32A7KAX9 2087 aa2.54□□□□□ -2
CMSS1-204ENST00000479555 IGKV2D-24A0A075B6R9 120 aa2.53□□□□□ -2
CMSS1-204ENST00000479555 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
CMSS1-204ENST00000479555 Q8N9L7 120 aa2.53□□□□□ -2
CMSS1-204ENST00000479555 CHCHD10Q8WYQ3 142 aaPredicted RBP2.53□□□□□ -2
CMSS1-204ENST00000479555 IGSF10Q6WRI0 2623 aa2.53□□□□□ -2.01
CMSS1-204ENST00000479555 PKD1L2Q7Z442 2459 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 KMT2BQ9UMN6 2715 aaPredicted RBP2.52□□□□□ -2.01
CMSS1-204ENST00000479555 EPG5Q9HCE0 2579 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 K7EQZ3 153 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 UQCR11O14957 56 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 PRR3P79522 188 aaKnown RBP2.52□□□□□ -2.01
CMSS1-204ENST00000479555 PRB3Q04118 309 aaPredicted RBP2.52□□□□□ -2.01
CMSS1-204ENST00000479555 REG3AQ06141 175 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 C11orf71Q6IPW1 123 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 PRO0255Q9UI72 69 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 KLK12Q9UKR0 248 aa2.52□□□□□ -2.01
CMSS1-204ENST00000479555 UTP20O75691 2785 aaKnown RBP2.52□□□□□ -2.01
CMSS1-204ENST00000479555 PLXNB1O43157 2135 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 NBPF19A0A087WUL8 3843 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 CACNA1BQ00975 2339 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 LYNX1G3V0Z9 82 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 PRB2P02812 416 aaPredicted RBP2.51□□□□□ -2.01
CMSS1-204ENST00000479555 LYNX1P0DP58 116 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 ACYP2P14621 99 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 DEFB109BQ30KR1 87 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 ZFYVE26Q68DK2 2539 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 CFAP46Q8IYW2 2715 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 CHD6Q8TD26 2715 aa2.51□□□□□ -2.01
CMSS1-204ENST00000479555 CRYBG3Q68DQ2 2970 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 CNTRLQ7Z7A1 2325 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 A8MWP4 228 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 ANGP03950 147 aaKnown RBP2.5□□□□□ -2.01
CMSS1-204ENST00000479555 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 ST20-AS1Q8NBB2 130 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms