RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 CHD7Q9P2D1 2997 aa1.1□□□□□ -2.23
CCNL1-220ENST00000478454 DNAH12Q6ZR08 3092 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 LAMA2P24043 3122 aaKnown RBP1.09□□□□□ -2.23
CCNL1-220ENST00000478454 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 TRIOO75962 3097 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 A0A1B0GUT8 65 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 C3orf79P0CE67 100 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 CAV3P56539 151 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 Q96NJ1 140 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 CCL19Q99731 98 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 FAM103A1Q9BTL3 118 aaKnown RBP1.09□□□□□ -2.23
CCNL1-220ENST00000478454 UBE2D4Q9Y2X8 147 aa1.09□□□□□ -2.23
CCNL1-220ENST00000478454 MUC3AQ02505 3323 aa1.09□□□□□ -2.24
CCNL1-220ENST00000478454 HIVEP3Q5T1R4 2406 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
CCNL1-220ENST00000478454 A0A087WTM6 91 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 LOC730098B7Z3J9 87 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 ZNF137PP52743 207 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 COX17Q14061 63 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 ATXN8Q156A1 80 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 ATP5EP2Q5VTU8 51 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 OBSCN-AS1Q96MR7 158 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 USP9XQ93008 2570 aaPredicted RBP1.08□□□□□ -2.24
CCNL1-220ENST00000478454 IGSF10Q6WRI0 2623 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 CREBBPQ92793 2442 aa1.08□□□□□ -2.24
CCNL1-220ENST00000478454 PCNX1Q96RV3 2341 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 USP9YO00507 2555 aaPredicted RBP1.07□□□□□ -2.24
CCNL1-220ENST00000478454 SPG11Q96JI7 2443 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 ABCA1O95477 2261 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 H0Y9P7 68 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 HCRTO43612 131 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 S100A3P33764 101 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 C10orf113Q5VZT2 155 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 Q6ZSA8 131 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 SPRR4Q96PI1 79 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 LINC00846Q9NV44 126 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 NAV3Q8IVL0 2385 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 DOPEY1Q5JWR5 2465 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 PRUNE2Q8WUY3 3088 aa1.07□□□□□ -2.24
CCNL1-220ENST00000478454 GCN1Q92616 2671 aaKnown RBP1.06□□□□□ -2.24
CCNL1-220ENST00000478454 UNC80Q8N2C7 3258 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 FLNCQ14315 2725 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 CFAP46Q8IYW2 2715 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 TSC2P49815 1807 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 CDH23Q9H251 3354 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 A0A0D9SFI3 127 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 TRBV30A0A0K0K1B3 111 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 HAMPP81172 84 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 WFDC9Q8NEX5 89 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 TMEM263Q8WUH6 116 aaKnown RBP1.06□□□□□ -2.24
CCNL1-220ENST00000478454 VCANP13611 3396 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 CENPEQ02224 2701 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 MTORP42345 2549 aa1.06□□□□□ -2.24
CCNL1-220ENST00000478454 CACNA1CQ13936 2221 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 DOPEY2Q9Y3R5 2298 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 PIEZO2Q9H5I5 2752 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 NCR3O14931 201 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 NDUFB1O75438 58 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 IFI6P09912 130 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 SPINK7P58062 85 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 DEFB112Q30KQ8 113 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 POLQO75417 2590 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 SETXQ7Z333 2677 aaKnown RBP1.05□□□□□ -2.24
CCNL1-220ENST00000478454 ITPR2Q14571 2701 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 PKDREJQ9NTG1 2253 aa1.05□□□□□ -2.24
CCNL1-220ENST00000478454 DSPP15924 2871 aaKnown RBP1.05□□□□□ -2.24
CCNL1-220ENST00000478454 C2CD3Q4AC94 2353 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 ASH1LQ9NR48 2969 aaKnown RBP1.04□□□□□ -2.24
CCNL1-220ENST00000478454 ABCA2Q9BZC7 2435 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 MYO9AB2RTY4 2548 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 TRAV21A0A0B4J279 112 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 TRBV7-4A0A0J9YYF1 115 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 CD52P31358 61 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 SPATA8Q6RVD6 105 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 Q6ZRX8 168 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 SMIM11BQ8TCY0 68 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 GAFA1Q96PS6 74 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 FXYD6Q9H0Q3 95 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 LINC00472Q9H8W2 130 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 ABCA12Q86UK0 2595 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 ITPR1Q14643 2758 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 REV3LO60673 3130 aa1.04□□□□□ -2.24
CCNL1-220ENST00000478454 ANKHD1Q8IWZ3 2542 aaKnown RBP1.04□□□□□ -2.24
CCNL1-220ENST00000478454 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
CCNL1-220ENST00000478454 CFAP54Q96N23 3096 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 CADP27708 2225 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 CCDC168Q8NDH2 2452 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 TRBV6-1A0A0K0K1D8 114 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 LINC01549A6NIU2 74 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 NREPQ16612 68 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 UNQ6190/PRO20217Q6UXQ8 127 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 PLAC4Q8WY50 150 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 PLAC8Q9NZF1 115 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 FRYLO94915 3013 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 USP34Q70CQ2 3546 aa1.03□□□□□ -2.24
CCNL1-220ENST00000478454 SETD2Q9BYW2 2564 aaPredicted RBP1.02□□□□□ -2.25
CCNL1-220ENST00000478454 HECTD1Q9ULT8 2610 aa1.02□□□□□ -2.25
CCNL1-220ENST00000478454 EYSQ5T1H1 3165 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms