RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RYR3Q15413 4870 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 IGLV1-50A0A075B6I6 118 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 IGKV2-24A0A0C4DH68 120 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 JMJD7-PLA2G4BH0Y9G9 81 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 LY6G6CO95867 125 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 LINC00528Q8N1L1 170 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
SMC1A-205ENST00000469129 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
SMC1A-205ENST00000469129 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 A0A087WTM6 91 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 LCE6AA0A183 80 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 ETDCA0A1B0GVM5 59 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 ACYP1P07311 99 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
SMC1A-205ENST00000469129 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 LYSTQ99698 3801 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 SPRR1AP35321 89 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 Q6ZQY7 126 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
SMC1A-205ENST00000469129 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
SMC1A-205ENST00000469129 Q6ZRX8 168 aa5.96□□□□□ -1.46
SMC1A-205ENST00000469129 OBSCN-AS1Q96MR7 158 aa5.96□□□□□ -1.46
SMC1A-205ENST00000469129 RPL37AP8A6NKH3 93 aa5.95□□□□□ -1.46
SMC1A-205ENST00000469129 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
SMC1A-205ENST00000469129 RYR2Q92736 4967 aa5.95□□□□□ -1.46
SMC1A-205ENST00000469129 B5MCH6 92 aa5.94□□□□□ -1.46
SMC1A-205ENST00000469129 RTL8CO15255 209 aa5.94□□□□□ -1.46
SMC1A-205ENST00000469129 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
SMC1A-205ENST00000469129 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
SMC1A-205ENST00000469129 DNAH6Q9C0G6 4158 aa5.93□□□□□ -1.46
SMC1A-205ENST00000469129 KRTAP4-16G5E9R7 235 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-205ENST00000469129 PDE6GP18545 87 aa5.93□□□□□ -1.46
SMC1A-205ENST00000469129 UBE2BP63146 152 aa5.93□□□□□ -1.46
SMC1A-205ENST00000469129 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
SMC1A-205ENST00000469129 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
SMC1A-205ENST00000469129 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
SMC1A-205ENST00000469129 SPACA4Q8TDM5 124 aa5.92□□□□□ -1.46
SMC1A-205ENST00000469129 CDIP1Q9H305 208 aa5.92□□□□□ -1.46
SMC1A-205ENST00000469129 IGLV5-52A0A0A0MRZ9 124 aa5.91□□□□□ -1.46
SMC1A-205ENST00000469129 A0A1W2PNN7 141 aa5.91□□□□□ -1.46
SMC1A-205ENST00000469129 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
SMC1A-205ENST00000469129 RBM3P98179 157 aaKnown RBP5.91□□□□□ -1.46
SMC1A-205ENST00000469129 HYDINQ4G0P3 5121 aa5.9□□□□□ -1.46
SMC1A-205ENST00000469129 LOC110117498A0A087WWA1 95 aa5.9□□□□□ -1.46
SMC1A-205ENST00000469129 FAM19A1Q7Z5A9 133 aa5.9□□□□□ -1.46
SMC1A-205ENST00000469129 DSCR8Q96T75 97 aa5.9□□□□□ -1.46
SMC1A-205ENST00000469129 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
SMC1A-205ENST00000469129 CCKP06307 115 aa5.89□□□□□ -1.47
SMC1A-205ENST00000469129 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SMC1A-205ENST00000469129 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
SMC1A-205ENST00000469129 Q9BRP9 147 aa5.89□□□□□ -1.47
SMC1A-205ENST00000469129 A0A1B0GV72 72 aa5.88□□□□□ -1.47
SMC1A-205ENST00000469129 H0Y9J4 135 aa5.88□□□□□ -1.47
SMC1A-205ENST00000469129 SCGB1A1P11684 91 aa5.88□□□□□ -1.47
SMC1A-205ENST00000469129 XGP55808 180 aa5.88□□□□□ -1.47
SMC1A-205ENST00000469129 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
SMC1A-205ENST00000469129 IGLV5-48A0A075B6I7 105 aa5.87□□□□□ -1.47
SMC1A-205ENST00000469129 EPM2AB3EWF7 344 aa5.87□□□□□ -1.47
SMC1A-205ENST00000469129 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
SMC1A-205ENST00000469129 Q6ZQT0 140 aa5.86□□□□□ -1.47
SMC1A-205ENST00000469129 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
SMC1A-205ENST00000469129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-205ENST00000469129 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 BCE1O60756 84 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 UBE2AP49459 152 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 PRLHP81277 87 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 TNP2Q05952 138 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 SMCR5Q8TEV8 140 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
SMC1A-205ENST00000469129 F8WEM9 126 aa5.84□□□□□ -1.47
SMC1A-205ENST00000469129 PANO1I0J062 215 aa5.84□□□□□ -1.47
SMC1A-205ENST00000469129 LINC01547P58512 204 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-205ENST00000469129 Q8N377 158 aa5.84□□□□□ -1.47
SMC1A-205ENST00000469129 DEFB105AQ8NG35 78 aa5.84□□□□□ -1.47
SMC1A-205ENST00000469129 HIGD2AQ9BW72 106 aa5.84□□□□□ -1.47
SMC1A-205ENST00000469129 ATP5EP2Q5VTU8 51 aa5.83□□□□□ -1.48
SMC1A-205ENST00000469129 Q6Q795 121 aa5.83□□□□□ -1.48
SMC1A-205ENST00000469129 DNAH17Q9UFH2 4485 aa5.82□□□□□ -1.48
SMC1A-205ENST00000469129 Q6JHZ5 121 aa5.82□□□□□ -1.48
SMC1A-205ENST00000469129 UBL5Q9BZL1 73 aa5.82□□□□□ -1.48
SMC1A-205ENST00000469129 TRBV7-7A0A0K0K1E9 115 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 A0A1B0GW54 56 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 ST20-AS1Q8NBB2 130 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 IMUPQ9GZP8 106 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
SMC1A-205ENST00000469129 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMC1A-205ENST00000469129 KRTAP11-1Q8IUC1 163 aa5.8□□□□□ -1.48
SMC1A-205ENST00000469129 ZNF706Q9Y5V0 76 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-205ENST00000469129 SPRR1BP22528 89 aa5.79□□□□□ -1.48
SMC1A-205ENST00000469129 LINC00336Q6ZUF6 198 aa5.79□□□□□ -1.48
SMC1A-205ENST00000469129 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
SMC1A-205ENST00000469129 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
SMC1A-205ENST00000469129 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
SMC1A-205ENST00000469129 PCP4P48539 62 aa5.78□□□□□ -1.48
SMC1A-205ENST00000469129 C1orf137Q5JT78 98 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms