RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PSCAO43653 123 aa14.1□□□□□ -0.15
PDLIM2-216ENST00000464275 ZNF73O43830 326 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-216ENST00000464275 C9orf153Q5TBE3 101 aa14.1□□□□□ -0.15
PDLIM2-216ENST00000464275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-216ENST00000464275 NKAPP1Q8N9T2 125 aa14.09□□□□□ -0.15
PDLIM2-216ENST00000464275 Q6ZQT0 140 aa14.08□□□□□ -0.16
PDLIM2-216ENST00000464275 LOC107984640A0A0U1RRK4 108 aa14.07□□□□□ -0.16
PDLIM2-216ENST00000464275 COX7BP24311 80 aa14.07□□□□□ -0.16
PDLIM2-216ENST00000464275 SERTAD4-AS1Q5TG53 156 aa14.07□□□□□ -0.16
PDLIM2-216ENST00000464275 LAMTOR3Q9UHA4 124 aa14.07□□□□□ -0.16
PDLIM2-216ENST00000464275 ELOF1P60002 83 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-216ENST00000464275 NBDYA0A0U1RRE5 68 aa14.05□□□□□ -0.16
PDLIM2-216ENST00000464275 CRYGAP11844 174 aa14.05□□□□□ -0.16
PDLIM2-216ENST00000464275 Q6ZQY7 126 aa14.05□□□□□ -0.16
PDLIM2-216ENST00000464275 IGLV5-37A0A075B6J1 123 aa14.04□□□□□ -0.16
PDLIM2-216ENST00000464275 DSCR8Q96T75 97 aa14.04□□□□□ -0.16
PDLIM2-216ENST00000464275 C14orf177Q52M58 125 aa14.03□□□□□ -0.16
PDLIM2-216ENST00000464275 CNBPP62633 177 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-216ENST00000464275 SERP2Q8N6R1 65 aa14.02□□□□□ -0.16
PDLIM2-216ENST00000464275 C7orf33Q8WU49 177 aa14.02□□□□□ -0.16
PDLIM2-216ENST00000464275 CSMD3Q7Z407 3707 aa14□□□□□ -0.17
PDLIM2-216ENST00000464275 PLECQ15149 4684 aaKnown RBP14□□□□□ -0.17
PDLIM2-216ENST00000464275 KCNQ1DNQ9H478 68 aa14□□□□□ -0.17
PDLIM2-216ENST00000464275 PRKDCP78527 4128 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-216ENST00000464275 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
PDLIM2-216ENST00000464275 LYSTQ99698 3801 aa13.98□□□□□ -0.17
PDLIM2-216ENST00000464275 FAM168BA1KXE4 195 aa13.98□□□□□ -0.17
PDLIM2-216ENST00000464275 A0A087WVE0 104 aa13.97□□□□□ -0.17
PDLIM2-216ENST00000464275 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
PDLIM2-216ENST00000464275 BCE1O60756 84 aa13.95□□□□□ -0.18
PDLIM2-216ENST00000464275 TRBV7-4A0A0J9YYF1 115 aa13.94□□□□□ -0.18
PDLIM2-216ENST00000464275 KRTAP7-1Q8IUC3 87 aa13.94□□□□□ -0.18
PDLIM2-216ENST00000464275 IGLV1-50A0A075B6I6 118 aa13.93□□□□□ -0.18
PDLIM2-216ENST00000464275 PRYO14603 147 aa13.93□□□□□ -0.18
PDLIM2-216ENST00000464275 C16orf90A8MZG2 172 aa13.92□□□□□ -0.18
PDLIM2-216ENST00000464275 LRCOL1A6NCL2 159 aa13.92□□□□□ -0.18
PDLIM2-216ENST00000464275 Q6ZRN7 208 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-216ENST00000464275 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-216ENST00000464275 DNAH10Q8IVF4 4471 aa13.92□□□□□ -0.18
PDLIM2-216ENST00000464275 MRPL55Q7Z7F7 128 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-216ENST00000464275 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-216ENST00000464275 CXCL6P80162 114 aa13.91□□□□□ -0.18
PDLIM2-216ENST00000464275 STARD9Q9P2P6 4700 aa13.9□□□□□ -0.18
PDLIM2-216ENST00000464275 A0A096LNI7 61 aa13.9□□□□□ -0.18
PDLIM2-216ENST00000464275 RPL37AP8A6NKH3 93 aa13.89□□□□□ -0.19
PDLIM2-216ENST00000464275 Q6ZVQ6 151 aa13.89□□□□□ -0.19
PDLIM2-216ENST00000464275 MEGF8Q7Z7M0 2845 aa13.88□□□□□ -0.19
PDLIM2-216ENST00000464275 SPRR1AP35321 89 aa13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 VPS13DQ5THJ4 4388 aa13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 LINC01547P58512 204 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 FAM19A1Q7Z5A9 133 aa13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 PKIGQ9Y2B9 76 aa13.87□□□□□ -0.19
PDLIM2-216ENST00000464275 M0R2N4 97 aa13.85□□□□□ -0.19
PDLIM2-216ENST00000464275 IGKV2-24A0A0C4DH68 120 aa13.85□□□□□ -0.19
PDLIM2-216ENST00000464275 KRTAP4-16G5E9R7 235 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-216ENST00000464275 C9orf163Q8N9P6 203 aa13.85□□□□□ -0.19
PDLIM2-216ENST00000464275 ETDCA0A1B0GVM5 59 aa13.83□□□□□ -0.19
PDLIM2-216ENST00000464275 TMEM258P61165 79 aa13.83□□□□□ -0.19
PDLIM2-216ENST00000464275 TENM2Q9NT68 2774 aa13.83□□□□□ -0.2
PDLIM2-216ENST00000464275 Q6ZRX8 168 aa13.82□□□□□ -0.2
PDLIM2-216ENST00000464275 DHRS4-AS1Q9P1J3 65 aa13.82□□□□□ -0.2
PDLIM2-216ENST00000464275 HAMPP81172 84 aa13.81□□□□□ -0.2
PDLIM2-216ENST00000464275 A0A1W2PNN7 141 aa13.8□□□□□ -0.2
PDLIM2-216ENST00000464275 Q6ZR54 194 aa13.79□□□□□ -0.2
PDLIM2-216ENST00000464275 REG3GQ6UW15 175 aa13.78□□□□□ -0.2
PDLIM2-216ENST00000464275 RPS28P62857 69 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-216ENST00000464275 TRAV7A0A075B6U4 112 aa13.76□□□□□ -0.21
PDLIM2-216ENST00000464275 Q9BRP9 147 aa13.76□□□□□ -0.21
PDLIM2-216ENST00000464275 A0A1B0GW54 56 aa13.75□□□□□ -0.21
PDLIM2-216ENST00000464275 SVIPQ8NHG7 77 aa13.75□□□□□ -0.21
PDLIM2-216ENST00000464275 J3KT08 172 aa13.74□□□□□ -0.21
PDLIM2-216ENST00000464275 CHTF8P0CG12 524 aa13.74□□□□□ -0.21
PDLIM2-216ENST00000464275 A0A087WTM6 91 aa13.74□□□□□ -0.21
PDLIM2-216ENST00000464275 LINC00474Q9P2X8 69 aa13.74□□□□□ -0.21
PDLIM2-216ENST00000464275 IGLV5-48A0A075B6I7 105 aa13.7□□□□□ -0.22
PDLIM2-216ENST00000464275 UBE2BP63146 152 aa13.69□□□□□ -0.22
PDLIM2-216ENST00000464275 Q8N377 158 aa13.69□□□□□ -0.22
PDLIM2-216ENST00000464275 DEFB105AQ8NG35 78 aa13.69□□□□□ -0.22
PDLIM2-216ENST00000464275 WWC2-AS2Q96NR7 200 aa13.69□□□□□ -0.22
PDLIM2-216ENST00000464275 CYSTM1Q9H1C7 97 aa13.69□□□□□ -0.22
PDLIM2-216ENST00000464275 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-216ENST00000464275 LY6G6CO95867 125 aa13.65□□□□□ -0.22
PDLIM2-216ENST00000464275 C1orf134Q5TEV5 83 aa13.65□□□□□ -0.22
PDLIM2-216ENST00000464275 FBN3Q75N90 2809 aa13.64□□□□□ -0.23
PDLIM2-216ENST00000464275 ERC2-IT1O76042 136 aa13.63□□□□□ -0.23
PDLIM2-216ENST00000464275 NREPQ16612 68 aa13.63□□□□□ -0.23
PDLIM2-216ENST00000464275 ST20-AS1Q8NBB2 130 aa13.63□□□□□ -0.23
PDLIM2-216ENST00000464275 C20orf197Q8N268 126 aa13.62□□□□□ -0.23
PDLIM2-216ENST00000464275 PANO1I0J062 215 aa13.61□□□□□ -0.23
PDLIM2-216ENST00000464275 FUSP35637 526 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM2-216ENST00000464275 KLKP1Q107X0 134 aa13.61□□□□□ -0.23
PDLIM2-216ENST00000464275 SPACA4Q8TDM5 124 aa13.61□□□□□ -0.23
PDLIM2-216ENST00000464275 LINC00476Q8WZB0 136 aa13.61□□□□□ -0.23
PDLIM2-216ENST00000464275 RTL8CO15255 209 aa13.6□□□□□ -0.23
PDLIM2-216ENST00000464275 DPH3Q96FX2 82 aa13.6□□□□□ -0.23
PDLIM2-216ENST00000464275 DNAH6Q9C0G6 4158 aa13.6□□□□□ -0.23
PDLIM2-216ENST00000464275 KRTAP11-1Q8IUC1 163 aa13.59□□□□□ -0.23
PDLIM2-216ENST00000464275 PRLHP81277 87 aa13.58□□□□□ -0.24
PDLIM2-216ENST00000464275 EPM2AB3EWF7 344 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms