RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 SMCR5Q8TEV8 140 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 TRAV7A0A075B6U4 112 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 Q6ZVQ6 151 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
BEST1-202ENST00000449131 CHKB-CPT1BH3BT56 60 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 COL6A5A8TX70 2615 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 NDUFC1O43677 76 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 ESRGQ1W209 222 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 CD164Q04900 197 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 C6orf48Q9UBA6 75 aa4.91□□□□□ -1.62
BEST1-202ENST00000449131 SETXQ7Z333 2677 aaKnown RBP4.91□□□□□ -1.62
BEST1-202ENST00000449131 SPINK6Q6UWN8 80 aa4.9□□□□□ -1.62
BEST1-202ENST00000449131 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.62
BEST1-202ENST00000449131 REG3GQ6UW15 175 aa4.9□□□□□ -1.62
BEST1-202ENST00000449131 ZFHX3Q15911 3703 aa4.9□□□□□ -1.63
BEST1-202ENST00000449131 NBPF19A0A087WUL8 3843 aa4.89□□□□□ -1.63
BEST1-202ENST00000449131 LINC01547P58512 204 aaPredicted RBP4.89□□□□□ -1.63
BEST1-202ENST00000449131 C9orf129Q5T035 196 aaKnown RBP4.89□□□□□ -1.63
BEST1-202ENST00000449131 Q8NAQ8 132 aa4.88□□□□□ -1.63
BEST1-202ENST00000449131 CSNK1G2-AS1Q8NCQ2 148 aa4.88□□□□□ -1.63
BEST1-202ENST00000449131 DEFB116Q30KQ4 102 aa4.88□□□□□ -1.63
BEST1-202ENST00000449131 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
BEST1-202ENST00000449131 LINC00336Q6ZUF6 198 aa4.88□□□□□ -1.63
BEST1-202ENST00000449131 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
BEST1-202ENST00000449131 GIG44P09565 113 aaPredicted RBP4.87□□□□□ -1.63
BEST1-202ENST00000449131 LINC01556Q5JQF7 62 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 CRYGAP11844 174 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 SPATA3Q8NHX4 192 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 PRLHP81277 87 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
BEST1-202ENST00000449131 A0A087WSZ3 146 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
BEST1-202ENST00000449131 LY6G6CO95867 125 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
BEST1-202ENST00000449131 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 LINC00474Q9P2X8 69 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 C19orf73Q9NVV2 129 aa4.86□□□□□ -1.63
BEST1-202ENST00000449131 Q9BRP9 147 aa4.85□□□□□ -1.63
BEST1-202ENST00000449131 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
BEST1-202ENST00000449131 LINC00167Q96N53 147 aa4.85□□□□□ -1.63
BEST1-202ENST00000449131 ZNF706Q9Y5V0 76 aaPredicted RBP4.85□□□□□ -1.63
BEST1-202ENST00000449131 HIVEP1P15822 2718 aa4.85□□□□□ -1.63
BEST1-202ENST00000449131 STAB1Q9NY15 2570 aa4.84□□□□□ -1.63
BEST1-202ENST00000449131 KRTAP24-1Q3LI83 254 aa4.84□□□□□ -1.63
BEST1-202ENST00000449131 BAHCC1Q9P281 2608 aa4.84□□□□□ -1.63
BEST1-202ENST00000449131 CR1P17927 2039 aa4.84□□□□□ -1.64
BEST1-202ENST00000449131 NUPR2A6NF83 97 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 H3BNG1 76 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 TMEM254Q8TBM7 123 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 CXCL6P80162 114 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
BEST1-202ENST00000449131 Q6ZQT0 140 aa4.83□□□□□ -1.64
BEST1-202ENST00000449131 FAM104AQ969W3 186 aa4.82□□□□□ -1.64
BEST1-202ENST00000449131 NSD1Q96L73 2696 aaPredicted RBP4.82□□□□□ -1.64
BEST1-202ENST00000449131 KRTAP10-3P60369 221 aa4.81□□□□□ -1.64
BEST1-202ENST00000449131 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
BEST1-202ENST00000449131 KRTAP1-3Q8IUG1 177 aa4.81□□□□□ -1.64
BEST1-202ENST00000449131 CYSTM1Q9H1C7 97 aa4.81□□□□□ -1.64
BEST1-202ENST00000449131 Q6ZRP5 223 aa4.8□□□□□ -1.64
BEST1-202ENST00000449131 TRBV7-6A0A0J9YX20 115 aa4.8□□□□□ -1.64
BEST1-202ENST00000449131 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
BEST1-202ENST00000449131 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
BEST1-202ENST00000449131 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
BEST1-202ENST00000449131 CIRBP-AS1Q8TBR5 109 aa4.8□□□□□ -1.64
BEST1-202ENST00000449131 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
BEST1-202ENST00000449131 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
BEST1-202ENST00000449131 IGLV5-52A0A0A0MRZ9 124 aa4.79□□□□□ -1.64
BEST1-202ENST00000449131 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
BEST1-202ENST00000449131 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
BEST1-202ENST00000449131 A6NED7 52 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 SMIM29Q86T20 159 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 LINC00612Q8N6U2 182 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 Q6ZRX8 168 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 PSPHP1O15172 72 aa4.78□□□□□ -1.64
BEST1-202ENST00000449131 PRR34Q9NV39 138 aa4.77□□□□□ -1.65
BEST1-202ENST00000449131 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
BEST1-202ENST00000449131 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
BEST1-202ENST00000449131 KRTAP1-1Q07627 177 aa4.77□□□□□ -1.65
BEST1-202ENST00000449131 H0Y9P7 68 aa4.77□□□□□ -1.65
BEST1-202ENST00000449131 Q8NBF4 154 aa4.76□□□□□ -1.65
BEST1-202ENST00000449131 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
BEST1-202ENST00000449131 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
BEST1-202ENST00000449131 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
BEST1-202ENST00000449131 A0A1W2PNN7 141 aa4.76□□□□□ -1.65
BEST1-202ENST00000449131 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
BEST1-202ENST00000449131 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 OTOGQ6ZRI0 2925 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 BCE1O60756 84 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 OXTP01178 125 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 CHTF8P0CG12 524 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
BEST1-202ENST00000449131 ZNF469Q96JG9 3925 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms