RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 C9orf116Q5BN46 136 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 CLPSL2Q6UWE3 100 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 C15orf56Q8N910 161 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 LAMA1P25391 3075 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 VPS13AQ96RL7 3174 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 EP300Q09472 2414 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 COL6A6A6NMZ7 2263 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 IGLV5-48A0A075B6I7 105 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 MSMBP08118 114 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 PRR3P79522 188 aaKnown RBP2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 LINC01554Q52M75 96 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 C1orf137Q5JT78 98 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 COA5Q86WW8 74 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 APC2O95996 2303 aa2.67□□□□□ -1.98
HMGB1P16-201ENST00000447155 ABCA2Q9BZC7 2435 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 IGLV1-50A0A075B6I6 118 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 B4DSR2 109 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 K7EQZ3 153 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 SPRR4Q96PI1 79 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 PRO0255Q9UI72 69 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 LINC01558Q9Y6Z2 57 aa2.66□□□□□ -1.98
HMGB1P16-201ENST00000447155 C19orf84I3L1E1 186 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 MOBPQ13875 183 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 CAMK2N2Q96S95 79 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 CCL19Q99731 98 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 PCNX1Q96RV3 2341 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 FRYQ5TBA9 3013 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 ZDBF2Q9HCK1 2354 aa2.65□□□□□ -1.99
HMGB1P16-201ENST00000447155 PRRC2CQ9Y520 2896 aaKnown RBP2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 LAMA3Q16787 3333 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 IGLV10-54A0A075B6I4 117 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 PRB2P02812 416 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 Q6ZRX8 168 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 ST20-AS1Q8NBB2 130 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 TP53AIP1Q9HCN2 124 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 CNOT1A5YKK6 2376 aaKnown RBP2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 ZFHX3Q15911 3703 aa2.64□□□□□ -1.99
HMGB1P16-201ENST00000447155 CFAP54Q96N23 3096 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 LINC00313P59037 77 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB136Q30KP8 78 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 UNQ6190/PRO20217Q6UXQ8 127 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 WFDC10BQ8IUB3 73 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 RETNLBQ9BQ08 111 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 C6orf48Q9UBA6 75 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 CDH23Q9H251 3354 aa2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 DSPP15924 2871 aaKnown RBP2.63□□□□□ -1.99
HMGB1P16-201ENST00000447155 TNRC18O15417 2968 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 LELP1Q5T871 98 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB105AQ8NG35 78 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 XAGE1AQ9HD64 81 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 CACNA1HO95180 2353 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 WNK1Q9H4A3 2382 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 USP34Q70CQ2 3546 aa2.62□□□□□ -1.99
HMGB1P16-201ENST00000447155 A0A1W2PNM2 257 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB130BP0DP73 79 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB130AP0DP74 79 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 LINC00483Q53H64 154 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 Q5W150 140 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 Q8NDZ9 215 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 PLAC8Q9NZF1 115 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 VCANP13611 3396 aa2.61□□□□□ -1.99
HMGB1P16-201ENST00000447155 TRIOO75962 3097 aa2.6□□□□□ -1.99
HMGB1P16-201ENST00000447155 CR1P17927 2039 aa2.6□□□□□ -1.99
HMGB1P16-201ENST00000447155 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
HMGB1P16-201ENST00000447155 A8MWP4 228 aa2.6□□□□□ -1.99
HMGB1P16-201ENST00000447155 SPAG11AQ6PDA7 123 aa2.6□□□□□ -1.99
HMGB1P16-201ENST00000447155 CFAP47Q6ZTR5 3102 aa2.59□□□□□ -1.99
HMGB1P16-201ENST00000447155 SORL1Q92673 2214 aa2.59□□□□□ -1.99
HMGB1P16-201ENST00000447155 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
HMGB1P16-201ENST00000447155 C10orf99Q6UWK7 81 aa2.59□□□□□ -1.99
HMGB1P16-201ENST00000447155 Q8NAQ8 132 aa2.59□□□□□ -1.99
HMGB1P16-201ENST00000447155 AKAP6Q13023 2319 aa2.59□□□□□ -2
HMGB1P16-201ENST00000447155 ACACAQ13085 2346 aa2.59□□□□□ -2
HMGB1P16-201ENST00000447155 MGAQ8IWI9 3026 aa2.59□□□□□ -2
HMGB1P16-201ENST00000447155 FRYLO94915 3013 aa2.58□□□□□ -2
HMGB1P16-201ENST00000447155 FREM2Q5SZK8 3169 aa2.58□□□□□ -2
HMGB1P16-201ENST00000447155 NCOR1O75376 2440 aa2.58□□□□□ -2
HMGB1P16-201ENST00000447155 A0A087WSZ3 146 aa2.58□□□□□ -2
HMGB1P16-201ENST00000447155 KALRNO60229 2985 aa2.58□□□□□ -2
HMGB1P16-201ENST00000447155 SPTBN5Q9NRC6 3674 aaKnown RBP2.58□□□□□ -2
HMGB1P16-201ENST00000447155 PTPRZ1P23471 2315 aaPredicted RBP2.58□□□□□ -2
HMGB1P16-201ENST00000447155 PRUNE2Q8WUY3 3088 aa2.57□□□□□ -2
HMGB1P16-201ENST00000447155 A0A096LPF7 62 aa2.57□□□□□ -2
HMGB1P16-201ENST00000447155 WDFY3Q8IZQ1 3526 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 TRIOBPQ9H2D6 2365 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 A0A1B0GU69 56 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 UQCR11O14957 56 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 RTL8CO15255 209 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 IGLV1-51P01701 117 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 SPRR1AP35321 89 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 SPINK7P58062 85 aa2.56□□□□□ -2
HMGB1P16-201ENST00000447155 ANKRD11Q6UB99 2663 aaPredicted RBP2.56□□□□□ -2
HMGB1P16-201ENST00000447155 HRNRQ86YZ3 2850 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms