RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 Q8NAQ8 132 aa12.43□□□□□ -0.42
SHANK3-203ENST00000445220 C9orf129Q5T035 196 aaKnown RBP12.41□□□□□ -0.42
SHANK3-203ENST00000445220 MAST4O15021 2626 aa12.4□□□□□ -0.42
SHANK3-203ENST00000445220 MGAM2Q2M2H8 2515 aa12.4□□□□□ -0.43
SHANK3-203ENST00000445220 WWC2-AS2Q96NR7 200 aa12.39□□□□□ -0.43
SHANK3-203ENST00000445220 IGLV1-50A0A075B6I6 118 aa12.38□□□□□ -0.43
SHANK3-203ENST00000445220 IGFL1Q6UW32 110 aa12.38□□□□□ -0.43
SHANK3-203ENST00000445220 SPANXA2-OT1Q8N9U9 137 aa12.36□□□□□ -0.43
SHANK3-203ENST00000445220 CDC42SE1Q9NRR8 79 aa12.36□□□□□ -0.43
SHANK3-203ENST00000445220 Q8N377 158 aa12.36□□□□□ -0.43
SHANK3-203ENST00000445220 C8orf17Q9NRJ1 99 aa12.35□□□□□ -0.43
SHANK3-203ENST00000445220 OBSCN-AS1Q96MR7 158 aa12.33□□□□□ -0.44
SHANK3-203ENST00000445220 FAM168BA1KXE4 195 aa12.32□□□□□ -0.44
SHANK3-203ENST00000445220 CFAP46Q8IYW2 2715 aa12.32□□□□□ -0.44
SHANK3-203ENST00000445220 Q1T7F1 81 aa12.31□□□□□ -0.44
SHANK3-203ENST00000445220 USP24Q9UPU5 2620 aa12.29□□□□□ -0.44
SHANK3-203ENST00000445220 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
SHANK3-203ENST00000445220 CSNK1G2-AS1Q8NCQ2 148 aa12.28□□□□□ -0.44
SHANK3-203ENST00000445220 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.44
SHANK3-203ENST00000445220 A0A096LNT2 108 aa12.27□□□□□ -0.45
SHANK3-203ENST00000445220 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
SHANK3-203ENST00000445220 CHTF8P0CG12 524 aa12.26□□□□□ -0.45
SHANK3-203ENST00000445220 CRIPTQ9P021 101 aa12.26□□□□□ -0.45
SHANK3-203ENST00000445220 A0A1B0GVX0 72 aa12.25□□□□□ -0.45
SHANK3-203ENST00000445220 Q96NJ1 140 aa12.25□□□□□ -0.45
SHANK3-203ENST00000445220 PRR34Q9NV39 138 aa12.25□□□□□ -0.45
SHANK3-203ENST00000445220 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
SHANK3-203ENST00000445220 Q5XG85 94 aa12.22□□□□□ -0.45
SHANK3-203ENST00000445220 ATRQ13535 2644 aa12.21□□□□□ -0.45
SHANK3-203ENST00000445220 A0A1W2PNM2 257 aa12.21□□□□□ -0.45
SHANK3-203ENST00000445220 TEP1Q99973 2627 aaKnown RBP12.2□□□□□ -0.46
SHANK3-203ENST00000445220 PCNTO95613 3336 aa12.19□□□□□ -0.46
SHANK3-203ENST00000445220 PRRC2CQ9Y520 2896 aaKnown RBP12.19□□□□□ -0.46
SHANK3-203ENST00000445220 TYMSOSQ8TAI1 123 aa12.18□□□□□ -0.46
SHANK3-203ENST00000445220 RTL8CO15255 209 aa12.18□□□□□ -0.46
SHANK3-203ENST00000445220 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
SHANK3-203ENST00000445220 RBM12B-AS1Q9P1G2 102 aa12.17□□□□□ -0.46
SHANK3-203ENST00000445220 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
SHANK3-203ENST00000445220 PLA2G2DQ9UNK4 145 aa12.16□□□□□ -0.46
SHANK3-203ENST00000445220 A0A0G2JQZ4 141 aa12.15□□□□□ -0.46
SHANK3-203ENST00000445220 A0A1W2PNN7 141 aa12.15□□□□□ -0.46
SHANK3-203ENST00000445220 DSCR10P59022 87 aa12.15□□□□□ -0.46
SHANK3-203ENST00000445220 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
SHANK3-203ENST00000445220 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
SHANK3-203ENST00000445220 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
SHANK3-203ENST00000445220 RANBP2P49792 3224 aaKnown RBP12.12□□□□□ -0.47
SHANK3-203ENST00000445220 TLX1NBP0CAT3 122 aa12.12□□□□□ -0.47
SHANK3-203ENST00000445220 GIG44P09565 113 aaPredicted RBP12.11□□□□□ -0.47
SHANK3-203ENST00000445220 APLNQ9ULZ1 77 aa12.11□□□□□ -0.47
SHANK3-203ENST00000445220 CHD7Q9P2D1 2997 aa12.1□□□□□ -0.47
SHANK3-203ENST00000445220 HTTP42858 3142 aa12.08□□□□□ -0.48
SHANK3-203ENST00000445220 Q75L30 129 aa12.08□□□□□ -0.48
SHANK3-203ENST00000445220 ZNF292O60281 2723 aa12.08□□□□□ -0.48
SHANK3-203ENST00000445220 FP248Q71RG6 208 aaPredicted RBP12.07□□□□□ -0.48
SHANK3-203ENST00000445220 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
SHANK3-203ENST00000445220 FAM104AQ969W3 186 aa12.07□□□□□ -0.48
SHANK3-203ENST00000445220 CENPEQ02224 2701 aa12.03□□□□□ -0.48
SHANK3-203ENST00000445220 A0A0C4DFX4 3053 aa12.03□□□□□ -0.48
SHANK3-203ENST00000445220 CYSTM1Q9H1C7 97 aa12.03□□□□□ -0.48
SHANK3-203ENST00000445220 FLNAP21333 2647 aaKnown RBP12.03□□□□□ -0.48
SHANK3-203ENST00000445220 ZNF575Q86XF7 245 aa12.03□□□□□ -0.48
SHANK3-203ENST00000445220 KRTAP10-11P60412 298 aa12.02□□□□□ -0.49
SHANK3-203ENST00000445220 PRR26Q8N8Z3 221 aa12.02□□□□□ -0.49
SHANK3-203ENST00000445220 K7EIL1 84 aa12.01□□□□□ -0.49
SHANK3-203ENST00000445220 LINC01554Q52M75 96 aa12□□□□□ -0.49
SHANK3-203ENST00000445220 IGLV7-46A0A075B6I9 117 aa12□□□□□ -0.49
SHANK3-203ENST00000445220 FAM229BQ4G0N7 80 aa12□□□□□ -0.49
SHANK3-203ENST00000445220 ZNF861PO60384 105 aa11.99□□□□□ -0.49
SHANK3-203ENST00000445220 KRTAP10-3P60369 221 aa11.99□□□□□ -0.49
SHANK3-203ENST00000445220 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
SHANK3-203ENST00000445220 Q8N9P0 234 aaPredicted RBP11.96□□□□□ -0.49
SHANK3-203ENST00000445220 CHD9Q3L8U1 2897 aa11.96□□□□□ -0.49
SHANK3-203ENST00000445220 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
SHANK3-203ENST00000445220 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
SHANK3-203ENST00000445220 CHD6Q8TD26 2715 aa11.95□□□□□ -0.5
SHANK3-203ENST00000445220 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
SHANK3-203ENST00000445220 H3BS24 57 aa11.94□□□□□ -0.5
SHANK3-203ENST00000445220 LINC01558Q9Y6Z2 57 aa11.93□□□□□ -0.5
SHANK3-203ENST00000445220 IGLV5-37A0A075B6J1 123 aa11.91□□□□□ -0.5
SHANK3-203ENST00000445220 GCN1Q92616 2671 aaKnown RBP11.9□□□□□ -0.5
SHANK3-203ENST00000445220 J3QL48 77 aa11.89□□□□□ -0.51
SHANK3-203ENST00000445220 STAB1Q9NY15 2570 aa11.89□□□□□ -0.51
SHANK3-203ENST00000445220 BPTFQ12830 3046 aa11.88□□□□□ -0.51
SHANK3-203ENST00000445220 KRTAP1-1Q07627 177 aa11.88□□□□□ -0.51
SHANK3-203ENST00000445220 Q5VV11 94 aa11.86□□□□□ -0.51
SHANK3-203ENST00000445220 Q8N1X5 172 aa11.84□□□□□ -0.51
SHANK3-203ENST00000445220 OXTP01178 125 aa11.84□□□□□ -0.51
SHANK3-203ENST00000445220 PRAC1Q96KF2 57 aa11.84□□□□□ -0.51
SHANK3-203ENST00000445220 ANAPC11Q9NYG5 84 aa11.84□□□□□ -0.51
SHANK3-203ENST00000445220 A0A0D9SG42 100 aa11.83□□□□□ -0.52
SHANK3-203ENST00000445220 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
SHANK3-203ENST00000445220 A0A087WTM6 91 aa11.82□□□□□ -0.52
SHANK3-203ENST00000445220 LUZP6Q538Z0 58 aa11.81□□□□□ -0.52
SHANK3-203ENST00000445220 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
SHANK3-203ENST00000445220 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
SHANK3-203ENST00000445220 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
SHANK3-203ENST00000445220 COL6A5A8TX70 2615 aa11.78□□□□□ -0.52
SHANK3-203ENST00000445220 IGSF10Q6WRI0 2623 aa11.77□□□□□ -0.53
SHANK3-203ENST00000445220 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
SHANK3-203ENST00000445220 IGLV7-43P04211 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms