RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
ACTN4-204ENST00000440400 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
ACTN4-204ENST00000440400 HAMPP81172 84 aa8.73□□□□□ -1.01
ACTN4-204ENST00000440400 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
ACTN4-204ENST00000440400 DNAH7Q8WXX0 4024 aa8.73□□□□□ -1.01
ACTN4-204ENST00000440400 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
ACTN4-204ENST00000440400 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
ACTN4-204ENST00000440400 H0YGX0 51 aa8.72□□□□□ -1.01
ACTN4-204ENST00000440400 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
ACTN4-204ENST00000440400 C6orf223Q8N319 242 aa8.71□□□□□ -1.01
ACTN4-204ENST00000440400 TENM2Q9NT68 2774 aa8.71□□□□□ -1.02
ACTN4-204ENST00000440400 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
ACTN4-204ENST00000440400 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
ACTN4-204ENST00000440400 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
ACTN4-204ENST00000440400 TGP01266 2768 aa8.71□□□□□ -1.02
ACTN4-204ENST00000440400 M0R2N4 97 aa8.69□□□□□ -1.02
ACTN4-204ENST00000440400 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
ACTN4-204ENST00000440400 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
ACTN4-204ENST00000440400 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
ACTN4-204ENST00000440400 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
ACTN4-204ENST00000440400 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
ACTN4-204ENST00000440400 PRR3P79522 188 aaKnown RBP8.68□□□□□ -1.02
ACTN4-204ENST00000440400 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
ACTN4-204ENST00000440400 Q8NDZ9 215 aa8.68□□□□□ -1.02
ACTN4-204ENST00000440400 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
ACTN4-204ENST00000440400 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
ACTN4-204ENST00000440400 H3BS24 57 aa8.65□□□□□ -1.03
ACTN4-204ENST00000440400 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.03
ACTN4-204ENST00000440400 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.03
ACTN4-204ENST00000440400 JMJD7-PLA2G4BH0Y9G9 81 aa8.64□□□□□ -1.03
ACTN4-204ENST00000440400 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
ACTN4-204ENST00000440400 COL7A1Q02388 2944 aa8.63□□□□□ -1.03
ACTN4-204ENST00000440400 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
ACTN4-204ENST00000440400 PRKDCP78527 4128 aaKnown RBP8.63□□□□□ -1.03
ACTN4-204ENST00000440400 Q6ZRU5 148 aa8.63□□□□□ -1.03
ACTN4-204ENST00000440400 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
ACTN4-204ENST00000440400 Q8N814 137 aa8.62□□□□□ -1.03
ACTN4-204ENST00000440400 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
ACTN4-204ENST00000440400 IGKV2D-24A0A075B6R9 120 aa8.61□□□□□ -1.03
ACTN4-204ENST00000440400 TMEM256-PLSCR3K7ERE1 68 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 Q6ZVQ6 151 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 DNHD1Q96M86 4753 aa8.6□□□□□ -1.03
ACTN4-204ENST00000440400 NUPR2A6NF83 97 aa8.59□□□□□ -1.03
ACTN4-204ENST00000440400 VPREB1P12018 145 aa8.59□□□□□ -1.03
ACTN4-204ENST00000440400 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
ACTN4-204ENST00000440400 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
ACTN4-204ENST00000440400 KRTAP1-5Q9BYS1 174 aa8.58□□□□□ -1.04
ACTN4-204ENST00000440400 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 Q6ZQT0 140 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 Q8N9L7 120 aa8.57□□□□□ -1.04
ACTN4-204ENST00000440400 LYSTQ99698 3801 aa8.56□□□□□ -1.04
ACTN4-204ENST00000440400 NREPQ16612 68 aa8.56□□□□□ -1.04
ACTN4-204ENST00000440400 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
ACTN4-204ENST00000440400 Q6ZRP5 223 aa8.56□□□□□ -1.04
ACTN4-204ENST00000440400 NDUFC1O43677 76 aa8.54□□□□□ -1.04
ACTN4-204ENST00000440400 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
ACTN4-204ENST00000440400 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
ACTN4-204ENST00000440400 M0R378 163 aa8.53□□□□□ -1.04
ACTN4-204ENST00000440400 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.04
ACTN4-204ENST00000440400 PSPHP1O15172 72 aa8.52□□□□□ -1.05
ACTN4-204ENST00000440400 BCE1O60756 84 aa8.52□□□□□ -1.05
ACTN4-204ENST00000440400 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
ACTN4-204ENST00000440400 BPY2O14599 106 aa8.51□□□□□ -1.05
ACTN4-204ENST00000440400 LINC00575Q6W349 94 aa8.51□□□□□ -1.05
ACTN4-204ENST00000440400 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
ACTN4-204ENST00000440400 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
ACTN4-204ENST00000440400 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
ACTN4-204ENST00000440400 Q6ZRN7 208 aaPredicted RBP8.49□□□□□ -1.05
ACTN4-204ENST00000440400 DNAH10Q8IVF4 4471 aa8.49□□□□□ -1.05
ACTN4-204ENST00000440400 PRYO14603 147 aa8.49□□□□□ -1.05
ACTN4-204ENST00000440400 PRR15Q8IV56 129 aa8.48□□□□□ -1.05
ACTN4-204ENST00000440400 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
ACTN4-204ENST00000440400 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
ACTN4-204ENST00000440400 A8MU10 97 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.47□□□□□ -1.05
ACTN4-204ENST00000440400 Q6ZQY7 126 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
ACTN4-204ENST00000440400 CXCL6P80162 114 aa8.46□□□□□ -1.05
ACTN4-204ENST00000440400 H3BQ85 93 aa8.46□□□□□ -1.06
ACTN4-204ENST00000440400 MEGF8Q7Z7M0 2845 aa8.45□□□□□ -1.06
ACTN4-204ENST00000440400 SERTAD4-AS1Q5TG53 156 aa8.45□□□□□ -1.06
ACTN4-204ENST00000440400 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
ACTN4-204ENST00000440400 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
ACTN4-204ENST00000440400 PRR4Q16378 134 aa8.45□□□□□ -1.06
ACTN4-204ENST00000440400 C14orf177Q52M58 125 aa8.45□□□□□ -1.06
ACTN4-204ENST00000440400 LOC110117498A0A087WWA1 95 aa8.44□□□□□ -1.06
ACTN4-204ENST00000440400 SPRR1AP35321 89 aa8.43□□□□□ -1.06
ACTN4-204ENST00000440400 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
ACTN4-204ENST00000440400 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms