RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
TSC2-206ENST00000439117 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
TSC2-206ENST00000439117 CFAP46Q8IYW2 2715 aa10.04□□□□□ -0.8
TSC2-206ENST00000439117 ATRQ13535 2644 aa10.03□□□□□ -0.8
TSC2-206ENST00000439117 ZNF292O60281 2723 aa10.03□□□□□ -0.8
TSC2-206ENST00000439117 LAMA3Q16787 3333 aa10.03□□□□□ -0.8
TSC2-206ENST00000439117 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
TSC2-206ENST00000439117 MAST4O15021 2626 aa10.02□□□□□ -0.81
TSC2-206ENST00000439117 KRTAP1-3Q8IUG1 177 aa10.01□□□□□ -0.81
TSC2-206ENST00000439117 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
TSC2-206ENST00000439117 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
TSC2-206ENST00000439117 MKI67P46013 3256 aaKnown RBP10□□□□□ -0.81
TSC2-206ENST00000439117 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
TSC2-206ENST00000439117 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
TSC2-206ENST00000439117 BPTFQ12830 3046 aa9.99□□□□□ -0.81
TSC2-206ENST00000439117 CSNK1G2-AS1Q8NCQ2 148 aa9.99□□□□□ -0.81
TSC2-206ENST00000439117 LINC00313P59037 77 aa9.99□□□□□ -0.81
TSC2-206ENST00000439117 SPANXA2-OT1Q8N9U9 137 aa9.99□□□□□ -0.81
TSC2-206ENST00000439117 EPM2AB3EWF7 344 aa9.98□□□□□ -0.81
TSC2-206ENST00000439117 LINC00588Q9Y4M8 146 aa9.98□□□□□ -0.81
TSC2-206ENST00000439117 Q6ZRP5 223 aa9.98□□□□□ -0.81
TSC2-206ENST00000439117 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
TSC2-206ENST00000439117 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.81
TSC2-206ENST00000439117 NBDYA0A0U1RRE5 68 aa9.95□□□□□ -0.82
TSC2-206ENST00000439117 KRTAP10-3P60369 221 aa9.95□□□□□ -0.82
TSC2-206ENST00000439117 C9orf129Q5T035 196 aaKnown RBP9.95□□□□□ -0.82
TSC2-206ENST00000439117 OBSCN-AS1Q96MR7 158 aa9.95□□□□□ -0.82
TSC2-206ENST00000439117 Q1T7F1 81 aa9.95□□□□□ -0.82
TSC2-206ENST00000439117 C16orf90A8MZG2 172 aa9.94□□□□□ -0.82
TSC2-206ENST00000439117 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
TSC2-206ENST00000439117 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
TSC2-206ENST00000439117 KRTAP10-11P60412 298 aa9.93□□□□□ -0.82
TSC2-206ENST00000439117 K7EIL1 84 aa9.92□□□□□ -0.82
TSC2-206ENST00000439117 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
TSC2-206ENST00000439117 IGFL1Q6UW32 110 aa9.91□□□□□ -0.82
TSC2-206ENST00000439117 PHF5AQ7RTV0 110 aaKnown RBP9.91□□□□□ -0.82
TSC2-206ENST00000439117 Q8N377 158 aa9.91□□□□□ -0.82
TSC2-206ENST00000439117 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
TSC2-206ENST00000439117 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
TSC2-206ENST00000439117 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
TSC2-206ENST00000439117 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
TSC2-206ENST00000439117 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
TSC2-206ENST00000439117 BRCA2P51587 3418 aa9.88□□□□□ -0.83
TSC2-206ENST00000439117 Q5XG85 94 aa9.87□□□□□ -0.83
TSC2-206ENST00000439117 MGAQ8IWI9 3026 aa9.87□□□□□ -0.83
TSC2-206ENST00000439117 OCR1Q9BZK8 76 aa9.87□□□□□ -0.83
TSC2-206ENST00000439117 RTL8CO15255 209 aa9.84□□□□□ -0.83
TSC2-206ENST00000439117 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
TSC2-206ENST00000439117 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
TSC2-206ENST00000439117 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
TSC2-206ENST00000439117 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
TSC2-206ENST00000439117 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
TSC2-206ENST00000439117 A0A0C4DFX4 3053 aa9.81□□□□□ -0.84
TSC2-206ENST00000439117 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
TSC2-206ENST00000439117 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
TSC2-206ENST00000439117 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
TSC2-206ENST00000439117 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
TSC2-206ENST00000439117 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.84
TSC2-206ENST00000439117 CHTF8P0CG12 524 aa9.77□□□□□ -0.85
TSC2-206ENST00000439117 FP248Q71RG6 208 aaPredicted RBP9.76□□□□□ -0.85
TSC2-206ENST00000439117 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
TSC2-206ENST00000439117 TEP1Q99973 2627 aaKnown RBP9.75□□□□□ -0.85
TSC2-206ENST00000439117 Q96NJ1 140 aa9.75□□□□□ -0.85
TSC2-206ENST00000439117 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
TSC2-206ENST00000439117 Q75L30 129 aa9.74□□□□□ -0.85
TSC2-206ENST00000439117 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
TSC2-206ENST00000439117 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
TSC2-206ENST00000439117 DSPP15924 2871 aaKnown RBP9.71□□□□□ -0.86
TSC2-206ENST00000439117 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
TSC2-206ENST00000439117 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
TSC2-206ENST00000439117 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
TSC2-206ENST00000439117 CFAP54Q96N23 3096 aa9.7□□□□□ -0.86
TSC2-206ENST00000439117 CYSTM1Q9H1C7 97 aa9.69□□□□□ -0.86
TSC2-206ENST00000439117 FAM104AQ969W3 186 aa9.68□□□□□ -0.86
TSC2-206ENST00000439117 AKAP13Q12802 2813 aa9.68□□□□□ -0.86
TSC2-206ENST00000439117 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
TSC2-206ENST00000439117 DSCR10P59022 87 aa9.67□□□□□ -0.86
TSC2-206ENST00000439117 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
TSC2-206ENST00000439117 A0A1W2PNN7 141 aa9.67□□□□□ -0.86
TSC2-206ENST00000439117 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
TSC2-206ENST00000439117 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.86
TSC2-206ENST00000439117 APLNQ9ULZ1 77 aa9.65□□□□□ -0.87
TSC2-206ENST00000439117 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
TSC2-206ENST00000439117 UNC80Q8N2C7 3258 aa9.64□□□□□ -0.87
TSC2-206ENST00000439117 SETXQ7Z333 2677 aaKnown RBP9.64□□□□□ -0.87
TSC2-206ENST00000439117 H3BS24 57 aa9.64□□□□□ -0.87
TSC2-206ENST00000439117 SPRR4Q96PI1 79 aa9.64□□□□□ -0.87
TSC2-206ENST00000439117 FAM229BQ4G0N7 80 aa9.63□□□□□ -0.87
TSC2-206ENST00000439117 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
TSC2-206ENST00000439117 UNC79Q9P2D8 2635 aa9.63□□□□□ -0.87
TSC2-206ENST00000439117 STAB1Q9NY15 2570 aa9.63□□□□□ -0.87
TSC2-206ENST00000439117 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
TSC2-206ENST00000439117 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
TSC2-206ENST00000439117 TEX15Q9BXT5 2789 aa9.61□□□□□ -0.87
TSC2-206ENST00000439117 TRIOO75962 3097 aa9.61□□□□□ -0.87
TSC2-206ENST00000439117 A0A087WTM6 91 aa9.6□□□□□ -0.87
TSC2-206ENST00000439117 COL6A5A8TX70 2615 aa9.59□□□□□ -0.87
TSC2-206ENST00000439117 ZNF861PO60384 105 aa9.59□□□□□ -0.87
TSC2-206ENST00000439117 CR1P17927 2039 aa9.58□□□□□ -0.88
TSC2-206ENST00000439117 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms