RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 AKAP13Q12802 2813 aa-0.71□□□□□ -2.52
TIMM9P3-201ENST00000428659 ANKRD36A6QL64 1941 aa-0.72□□□□□ -2.52
TIMM9P3-201ENST00000428659 ABCA3Q99758 1704 aa-0.72□□□□□ -2.52
TIMM9P3-201ENST00000428659 IQCF6A8MYZ5 107 aa-0.72□□□□□ -2.52
TIMM9P3-201ENST00000428659 PEA15Q15121 130 aa-0.72□□□□□ -2.52
TIMM9P3-201ENST00000428659 UBR3Q6ZT12 1888 aa-0.72□□□□□ -2.52
TIMM9P3-201ENST00000428659 PRRC2CQ9Y520 2896 aaKnown RBP-0.72□□□□□ -2.53
TIMM9P3-201ENST00000428659 PREX1Q8TCU6 1659 aa-0.72□□□□□ -2.53
TIMM9P3-201ENST00000428659 PDE4DIPQ5VU43 2346 aa-0.72□□□□□ -2.53
TIMM9P3-201ENST00000428659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.72□□□□□ -2.53
TIMM9P3-201ENST00000428659 USH2AO75445 5202 aa-0.72□□□□□ -2.53
TIMM9P3-201ENST00000428659 FANCAO15360 1455 aa-0.73□□□□□ -2.53
TIMM9P3-201ENST00000428659 HMGN2P05204 90 aaKnown RBP-0.73□□□□□ -2.53
TIMM9P3-201ENST00000428659 PRO3102Q9H379 93 aa-0.73□□□□□ -2.53
TIMM9P3-201ENST00000428659 HECTD1Q9ULT8 2610 aa-0.73□□□□□ -2.53
TIMM9P3-201ENST00000428659 LAMA1P25391 3075 aa-0.73□□□□□ -2.53
TIMM9P3-201ENST00000428659 TEP1Q99973 2627 aaKnown RBP-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 STARD9Q9P2P6 4700 aa-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 NDUFB1O75438 58 aa-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 GYPAP02724 150 aa-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 TNRC18O15417 2968 aaPredicted RBP-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 ATP10BO94823 1461 aa-0.74□□□□□ -2.53
TIMM9P3-201ENST00000428659 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 ATP6V1G2-DDX39BF2Z307 99 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 RBP2P50120 134 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 C14orf144Q96I85 54 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 LRRC7Q96NW7 1537 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 CRYBG1Q9Y4K1 1723 aa-0.75□□□□□ -2.53
TIMM9P3-201ENST00000428659 HERC2O95714 4834 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 LINC00158P58513 81 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 WFDC9Q8NEX5 89 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 CNTLNQ9NXG0 1405 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 ATP7BP35670 1465 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 CLTCQ00610 1675 aaKnown RBP-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 QSER1Q2KHR3 1735 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 RGPD2P0DJD1 1756 aa-0.76□□□□□ -2.53
TIMM9P3-201ENST00000428659 FASNP49327 2511 aaKnown RBP-0.77□□□□□ -2.53
TIMM9P3-201ENST00000428659 UBR4Q5T4S7 5183 aa-0.77□□□□□ -2.53
TIMM9P3-201ENST00000428659 PKD1L3Q7Z443 1732 aa-0.77□□□□□ -2.53
TIMM9P3-201ENST00000428659 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 MYO18BQ8IUG5 2567 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 K7EP34 96 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 M0R143 59 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 PRLHP81277 87 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 USP9YO00507 2555 aaPredicted RBP-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 FAT3Q8TDW7 4589 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 ZZEF1O43149 2961 aa-0.78□□□□□ -2.53
TIMM9P3-201ENST00000428659 ANKRD11Q6UB99 2663 aaPredicted RBP-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 DMXL1Q9Y485 3027 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 TRAV21A0A0B4J279 112 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 NCMAPQ5T1S8 102 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 ALKQ9UM73 1620 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 MTORP42345 2549 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 MUC17Q685J3 4493 aa-0.79□□□□□ -2.54
TIMM9P3-201ENST00000428659 ACACAQ13085 2346 aa-0.8□□□□□ -2.54
TIMM9P3-201ENST00000428659 PLIN4Q96Q06 1357 aa-0.8□□□□□ -2.54
TIMM9P3-201ENST00000428659 DEFA5Q01523 94 aa-0.8□□□□□ -2.54
TIMM9P3-201ENST00000428659 S4R3F8 94 aa-0.8□□□□□ -2.54
TIMM9P3-201ENST00000428659 NBPF19A0A087WUL8 3843 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 VPS13DQ5THJ4 4388 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 AKAP9Q99996 3911 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 MYMXA0A1B0GTQ4 84 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 IFI6P09912 130 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 IFI27P40305 119 aaPredicted RBP-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 DNAH9Q9NYC9 4486 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 C4AP0C0L4 1744 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 C4BP0C0L5 1744 aa-0.81□□□□□ -2.54
TIMM9P3-201ENST00000428659 PLXNC1O60486 1568 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 MAP3K1Q13233 1512 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 MAGI3Q5TCQ9 1506 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 SNRPFP62306 86 aaKnown RBP-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 DEFB110Q30KQ9 67 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 PKHD1L1Q86WI1 4243 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 MGAM2Q2M2H8 2515 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 DEPDC5O75140 1603 aa-0.82□□□□□ -2.54
TIMM9P3-201ENST00000428659 DNAH3Q8TD57 4116 aa-0.83□□□□□ -2.54
TIMM9P3-201ENST00000428659 CEBPZOSA8MTT3 80 aa-0.83□□□□□ -2.54
TIMM9P3-201ENST00000428659 HMGA1P17096 107 aaKnown RBP-0.83□□□□□ -2.54
TIMM9P3-201ENST00000428659 PYY3Q5JQD4 70 aa-0.83□□□□□ -2.54
TIMM9P3-201ENST00000428659 DOPEY1Q5JWR5 2465 aa-0.83□□□□□ -2.54
TIMM9P3-201ENST00000428659 TIAM2Q8IVF5 1701 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 LAMA2P24043 3122 aaKnown RBP-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 LCE6AA0A183 80 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 LYNX1G3V0Z9 82 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 S100A8P05109 93 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 ACYP1P07311 99 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 MT1HP80294 61 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 LINC00643Q86TS7 51 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 C20orf78Q9BR46 151 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 RABAC1Q9UI14 185 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 MYH4Q9Y623 1939 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 NWD1Q149M9 1564 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 NEXMIFQ5QGS0 1516 aa-0.84□□□□□ -2.54
TIMM9P3-201ENST00000428659 CUBNO60494 3623 aa-0.85□□□□□ -2.55
TIMM9P3-201ENST00000428659 KALRNO60229 2985 aa-0.85□□□□□ -2.55
TIMM9P3-201ENST00000428659 UMAD1C9J7I0 102 aa-0.85□□□□□ -2.55
TIMM9P3-201ENST00000428659 UTP20O75691 2785 aaKnown RBP-0.85□□□□□ -2.55
TIMM9P3-201ENST00000428659 PKIAP61925 76 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms