RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LINC00528Q8N1L1 170 aa16.9■□□□□ 0.3
LDB1-202ENST00000425280 A0A087WTM6 91 aa16.88■□□□□ 0.29
LDB1-202ENST00000425280 CDIP1Q9H305 208 aa16.88■□□□□ 0.29
LDB1-202ENST00000425280 TMEM256-PLSCR3K7ERE1 68 aa16.87■□□□□ 0.29
LDB1-202ENST00000425280 PRYO14603 147 aa16.87■□□□□ 0.29
LDB1-202ENST00000425280 OBSCN-AS1Q96MR7 158 aa16.87■□□□□ 0.29
LDB1-202ENST00000425280 A0A1W2PNN7 141 aa16.86■□□□□ 0.29
LDB1-202ENST00000425280 Q6ZQY7 126 aa16.86■□□□□ 0.29
LDB1-202ENST00000425280 LINC00476Q8WZB0 136 aa16.85■□□□□ 0.29
LDB1-202ENST00000425280 CHTF8P0CG12 524 aa16.84■□□□□ 0.29
LDB1-202ENST00000425280 INAFM2P0DMQ5 153 aa16.84■□□□□ 0.29
LDB1-202ENST00000425280 SDIM1Q6ZPB5 146 aa16.84■□□□□ 0.29
LDB1-202ENST00000425280 PKIGQ9Y2B9 76 aa16.83■□□□□ 0.28
LDB1-202ENST00000425280 SPRR1AP35321 89 aa16.82■□□□□ 0.28
LDB1-202ENST00000425280 KRTAP4-16G5E9R7 235 aaPredicted RBP16.82■□□□□ 0.28
LDB1-202ENST00000425280 C1orf134Q5TEV5 83 aa16.82■□□□□ 0.28
LDB1-202ENST00000425280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.82■□□□□ 0.28
LDB1-202ENST00000425280 C14orf132Q9NPU4 83 aa16.79■□□□□ 0.28
LDB1-202ENST00000425280 DNAH6Q9C0G6 4158 aa16.79■□□□□ 0.28
LDB1-202ENST00000425280 DNAH2Q9P225 4427 aa16.78■□□□□ 0.28
LDB1-202ENST00000425280 A0A1B0GV72 72 aa16.77■□□□□ 0.28
LDB1-202ENST00000425280 FAM240AA0A1B0GVK7 77 aa16.77■□□□□ 0.28
LDB1-202ENST00000425280 B5MCH6 92 aa16.77■□□□□ 0.27
LDB1-202ENST00000425280 C3orf84H3BNL1 204 aa16.77■□□□□ 0.27
LDB1-202ENST00000425280 ETDCA0A1B0GVM5 59 aa16.76■□□□□ 0.27
LDB1-202ENST00000425280 Q6ZRX8 168 aa16.76■□□□□ 0.27
LDB1-202ENST00000425280 H3BQ85 93 aa16.75■□□□□ 0.27
LDB1-202ENST00000425280 JMJD7-PLA2G4BH0Y9G9 81 aa16.74■□□□□ 0.27
LDB1-202ENST00000425280 LINC00474Q9P2X8 69 aa16.74■□□□□ 0.27
LDB1-202ENST00000425280 ALMS1Q8TCU4 4167 aa16.73■□□□□ 0.27
LDB1-202ENST00000425280 REG3GQ6UW15 175 aa16.73■□□□□ 0.27
LDB1-202ENST00000425280 SIGMAR1Q99720 223 aa16.73■□□□□ 0.27
LDB1-202ENST00000425280 PANO1I0J062 215 aa16.73■□□□□ 0.27
LDB1-202ENST00000425280 FUSP35637 526 aaKnown RBP eCLIP16.72■□□□□ 0.271e-7■□□□□ 9.1
LDB1-202ENST00000425280 Q9BRP9 147 aa16.71■□□□□ 0.27
LDB1-202ENST00000425280 XGP55808 180 aa16.7■□□□□ 0.26
LDB1-202ENST00000425280 GAGE2AQ6NT46 116 aa16.7■□□□□ 0.26
LDB1-202ENST00000425280 DHRS4-AS1Q9P1J3 65 aa16.7■□□□□ 0.26
LDB1-202ENST00000425280 RTL8CO15255 209 aa16.69■□□□□ 0.26
LDB1-202ENST00000425280 ACYP1P07311 99 aa16.69■□□□□ 0.26
LDB1-202ENST00000425280 PHF5AQ7RTV0 110 aaKnown RBP16.69■□□□□ 0.26
LDB1-202ENST00000425280 GHRHP01286 108 aa16.69■□□□□ 0.26
LDB1-202ENST00000425280 LAMTOR3Q9UHA4 124 aa16.69■□□□□ 0.26
LDB1-202ENST00000425280 HECTD4Q9Y4D8 3996 aa16.67■□□□□ 0.26
LDB1-202ENST00000425280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.66■□□□□ 0.26
LDB1-202ENST00000425280 SPACA4Q8TDM5 124 aa16.65■□□□□ 0.26
LDB1-202ENST00000425280 MT-ATP8P03928 68 aa16.65■□□□□ 0.26
LDB1-202ENST00000425280 KRTAP11-1Q8IUC1 163 aa16.64■□□□□ 0.25
LDB1-202ENST00000425280 DNAH17Q9UFH2 4485 aa16.64■□□□□ 0.25
LDB1-202ENST00000425280 RBM3P98179 157 aaKnown RBP16.63■□□□□ 0.25
LDB1-202ENST00000425280 TNP2Q05952 138 aa16.63■□□□□ 0.25
LDB1-202ENST00000425280 UBE2BP63146 152 aa16.62■□□□□ 0.25
LDB1-202ENST00000425280 DPH3Q96FX2 82 aa16.62■□□□□ 0.25
LDB1-202ENST00000425280 CCKP06307 115 aa16.61■□□□□ 0.25
LDB1-202ENST00000425280 NDUFV3P56181 108 aaKnown RBP16.6■□□□□ 0.25
LDB1-202ENST00000425280 IGLV5-52A0A0A0MRZ9 124 aa16.59■□□□□ 0.25
LDB1-202ENST00000425280 EPM2AB3EWF7 344 aa16.58■□□□□ 0.25
LDB1-202ENST00000425280 ERC2-IT1O76042 136 aa16.58■□□□□ 0.25
LDB1-202ENST00000425280 LINC01547P58512 204 aaPredicted RBP16.58■□□□□ 0.25
LDB1-202ENST00000425280 FAM19A1Q7Z5A9 133 aa16.58■□□□□ 0.24
LDB1-202ENST00000425280 DEFB105AQ8NG35 78 aa16.58■□□□□ 0.24
LDB1-202ENST00000425280 Q8N377 158 aa16.57■□□□□ 0.24
LDB1-202ENST00000425280 SMCR5Q8TEV8 140 aa16.57■□□□□ 0.24
LDB1-202ENST00000425280 LOC110117498A0A087WWA1 95 aa16.56■□□□□ 0.24
LDB1-202ENST00000425280 ST20-AS1Q8NBB2 130 aa16.55■□□□□ 0.24
LDB1-202ENST00000425280 PRLHP81277 87 aa16.55■□□□□ 0.24
LDB1-202ENST00000425280 Q6ZQT0 140 aa16.55■□□□□ 0.24
LDB1-202ENST00000425280 DSCR8Q96T75 97 aa16.54■□□□□ 0.24
LDB1-202ENST00000425280 FRAS1Q86XX4 4008 aa16.53■□□□□ 0.24
LDB1-202ENST00000425280 IGLV5-48A0A075B6I7 105 aa16.51■□□□□ 0.23
LDB1-202ENST00000425280 LINC00846Q9NV44 126 aa16.5■□□□□ 0.23
LDB1-202ENST00000425280 HYDINQ4G0P3 5121 aa16.49■□□□□ 0.23
LDB1-202ENST00000425280 TRBV7-4A0A0J9YYF1 115 aa16.49■□□□□ 0.23
LDB1-202ENST00000425280 PDE6GP18545 87 aa16.47■□□□□ 0.23
LDB1-202ENST00000425280 SCGB1A1P11684 91 aa16.46■□□□□ 0.23
LDB1-202ENST00000425280 H0Y9J4 135 aa16.46■□□□□ 0.22
LDB1-202ENST00000425280 LINC00643Q86TS7 51 aa16.46■□□□□ 0.22
LDB1-202ENST00000425280 PLAC8Q9NZF1 115 aa16.46■□□□□ 0.22
LDB1-202ENST00000425280 KRTAP10-2P60368 255 aa16.45■□□□□ 0.22
LDB1-202ENST00000425280 HIGD2AQ9BW72 106 aa16.45■□□□□ 0.22
LDB1-202ENST00000425280 C3orf22Q8N5N4 141 aa16.44■□□□□ 0.22
LDB1-202ENST00000425280 BCE1O60756 84 aa16.42■□□□□ 0.22
LDB1-202ENST00000425280 UBE2AP49459 152 aa16.41■□□□□ 0.22
LDB1-202ENST00000425280 DNAH11Q96DT5 4516 aa16.39■□□□□ 0.21
LDB1-202ENST00000425280 KRTAP13-1Q8IUC0 172 aa16.37■□□□□ 0.21
LDB1-202ENST00000425280 SMIM29Q86T20 159 aa16.36■□□□□ 0.21
LDB1-202ENST00000425280 TRBV7-7A0A0K0K1E9 115 aa16.34■□□□□ 0.21
LDB1-202ENST00000425280 DNAH5Q8TE73 4624 aa16.33■□□□□ 0.2
LDB1-202ENST00000425280 FAT2Q9NYQ8 4349 aa16.33■□□□□ 0.2
LDB1-202ENST00000425280 Q6Q795 121 aa16.32■□□□□ 0.2
LDB1-202ENST00000425280 PSORS1C2Q9UIG4 136 aa16.3■□□□□ 0.2
LDB1-202ENST00000425280 Q6JHZ5 121 aa16.3■□□□□ 0.2
LDB1-202ENST00000425280 FAM30AQ9NZY2 134 aa16.3■□□□□ 0.2
LDB1-202ENST00000425280 DNAH8Q96JB1 4490 aa16.29■□□□□ 0.2
LDB1-202ENST00000425280 UBL5Q9BZL1 73 aa16.28■□□□□ 0.2
LDB1-202ENST00000425280 LCE6AA0A183 80 aa16.28■□□□□ 0.2
LDB1-202ENST00000425280 PKD1P98161 4303 aa16.28■□□□□ 0.2
LDB1-202ENST00000425280 SACSQ9NZJ4 4579 aa16.27■□□□□ 0.2
LDB1-202ENST00000425280 C1orf137Q5JT78 98 aa16.26■□□□□ 0.19
LDB1-202ENST00000425280 IMUPQ9GZP8 106 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms