RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 MIR22HGQ0VDD5 57 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 FAM74A4Q5TZK3 123 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.61□□□□□ -2.31
PMS1-210ENST00000424307 CASC2Q6XLA1 102 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 ZFAND2AQ8N6M9 145 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 Q8NDZ9 215 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 LINC00208Q96KT6 92 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 KLK9Q9UKQ9 250 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 CSMD2Q7Z408 3487 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 CUBNO60494 3623 aa0.61□□□□□ -2.31
PMS1-210ENST00000424307 UBR5O95071 2799 aaPredicted RBP0.61□□□□□ -2.31
PMS1-210ENST00000424307 PTPRZ1P23471 2315 aaPredicted RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.312e-12■■■■■ 48.7
PMS1-210ENST00000424307 IGF2RP11717 2491 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 IGLV1-50A0A075B6I6 118 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 IGHV3-15A0A0B4J1V0 119 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 IGHV3-73A0A0B4J1V6 119 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 A8MWP4 228 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 JMJD7-PLA2G4BH0Y9G9 81 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 H0YGG7 62 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 H3BRN7 92 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 NDUFA1O15239 70 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 APELAP0DMC3 54 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 DEFB110Q30KQ9 67 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 KRTAP6-3Q3LI67 103 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 ASB16-AS1Q495Z4 193 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 LINC00483Q53H64 154 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PRR9Q5T870 116 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 CNEP1R1Q8N9A8 125 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 Q9BRP9 147 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 CHCHD7Q9BUK0 85 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 ZNRD1Q9P1U0 126 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 LINC01558Q9Y6Z2 57 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 FRAS1Q86XX4 4008 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 VPS13CQ709C8 3753 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 LOC110117498A0A087WWA1 95 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 TRBV6-4A0A1B0GX49 114 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 H0YGX0 51 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 NDUFA4O00483 81 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PPP1R17O96001 155 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PDE6GP18545 87 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 RPL27AP46776 148 aaKnown RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 CNBPP62633 177 aaKnown RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 ERHP84090 104 aaKnown RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 SPTBN1Q01082 2364 aaKnown RBP0.6□□□□□ -2.31
PMS1-210ENST00000424307 COX6A2Q02221 97 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 SPAG11BQ08648 103 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 ACACAQ13085 2346 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 DEFB113Q30KQ7 82 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 FAM27BQ5VT28 67 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 SPAG11AQ6PDA7 123 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 NTM-AS1Q6ZSK4 140 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 COA5Q86WW8 74 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 C15orf56Q8N910 161 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 COX14Q96I36 57 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 C20orf166-AS1Q96NR2 134 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PRO3102Q9H379 93 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 ZDBF2Q9HCK1 2354 aa0.6□□□□□ -2.31
PMS1-210ENST00000424307 APC2O95996 2303 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 PCNX1Q96RV3 2341 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 DCHS2Q6V1P9 2916 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 LRBAP50851 2863 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 TRGV2A0A075B6R0 118 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 IGKV3D-11A0A0A0MRZ8 115 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 I3L2K1 104 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 IGHV1-46P01743 117 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 RNASE3P12724 160 aaKnown RBP0.59□□□□□ -2.31
PMS1-210ENST00000424307 CCL18P55774 89 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 ELOF1P60002 83 aaKnown RBP0.59□□□□□ -2.31
PMS1-210ENST00000424307 PDE6HQ13956 83 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 DEFB116Q30KQ4 102 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 DEFB112Q30KQ8 113 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 KPRPQ5T749 579 aaPredicted RBP0.59□□□□□ -2.31
PMS1-210ENST00000424307 KRTAP26-1Q6PEX3 210 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 MUC7Q8TAX7 377 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 COX7B2Q8TF08 81 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 GAFA1Q96PS6 74 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 WFDC10AQ9H1F0 79 aa0.59□□□□□ -2.31
PMS1-210ENST00000424307 CHD6Q8TD26 2715 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 MUC6Q6W4X9 2439 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 CEP250Q9BV73 2442 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 CACNA1GO43497 2377 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 TRRAPQ9Y4A5 3859 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 ZFHX2Q9C0A1 2572 aaPredicted RBP0.59□□□□□ -2.32
PMS1-210ENST00000424307 TRGV4A0A0C4DH28 118 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 IGKV3OR2-268A0A0C4DH90 116 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 ETDCA0A1B0GVM5 59 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 A8MTW9 85 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 A8MUU9 505 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 LINC00158P58513 81 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 DEFB1P60022 68 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 KRTAP25-1Q3LHN0 102 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 Q5W150 140 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 TMEM105Q8N8V8 129 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 C9orf163Q8N9P6 203 aa0.59□□□□□ -2.32
PMS1-210ENST00000424307 SPANXA2-OT1Q8N9U9 137 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms