RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 TNRC6CQ9HCJ0 1690 aaKnown RBP2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 FAM208AQ9UK61 1670 aaKnown RBP2.11□□□□□ -2.07
PTP4A1P1-201ENST00000420539 CNFNQ9BYD5 112 aa2.1□□□□□ -2.07
PTP4A1P1-201ENST00000420539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.08□□□□□ -2.08
PTP4A1P1-201ENST00000420539 SPINK9Q5DT21 86 aa2.08□□□□□ -2.08
PTP4A1P1-201ENST00000420539 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
PTP4A1P1-201ENST00000420539 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
PTP4A1P1-201ENST00000420539 COX6A2Q02221 97 aa2.07□□□□□ -2.08
PTP4A1P1-201ENST00000420539 TOGARAM1Q9Y4F4 1720 aa2.07□□□□□ -2.08
PTP4A1P1-201ENST00000420539 OTOGLQ3ZCN5 2332 aa2.06□□□□□ -2.08
PTP4A1P1-201ENST00000420539 CDKN2A-AS1Q9UH64 79 aa2.06□□□□□ -2.08
PTP4A1P1-201ENST00000420539 Q6ZSA8 131 aa2.05□□□□□ -2.08
PTP4A1P1-201ENST00000420539 PRO0255Q9UI72 69 aa2.05□□□□□ -2.08
PTP4A1P1-201ENST00000420539 CNOT1A5YKK6 2376 aaKnown RBP2.05□□□□□ -2.08
PTP4A1P1-201ENST00000420539 LINC01546A6NGU7 62 aa2.04□□□□□ -2.08
PTP4A1P1-201ENST00000420539 HIVEP2P31629 2446 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 DEPDC5O75140 1603 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 NDUFA3O95167 84 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 COX6B2Q6YFQ2 88 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 SORL1Q92673 2214 aa2.03□□□□□ -2.08
PTP4A1P1-201ENST00000420539 RP1L1Q8IWN7 2480 aaPredicted RBP2.02□□□□□ -2.09
PTP4A1P1-201ENST00000420539 TRPM2O94759 1503 aa2.02□□□□□ -2.09
PTP4A1P1-201ENST00000420539 H0YGX0 51 aa2.02□□□□□ -2.09
PTP4A1P1-201ENST00000420539 CCL22O00626 93 aa2.02□□□□□ -2.09
PTP4A1P1-201ENST00000420539 PRO3102Q9H379 93 aa2.02□□□□□ -2.09
PTP4A1P1-201ENST00000420539 DOPEY2Q9Y3R5 2298 aa2.01□□□□□ -2.09
PTP4A1P1-201ENST00000420539 Q8IZM0 81 aa2.01□□□□□ -2.09
PTP4A1P1-201ENST00000420539 TIMM8BQ9Y5J9 83 aaPredicted RBP2.01□□□□□ -2.09
PTP4A1P1-201ENST00000420539 LINC00158P58513 81 aa2□□□□□ -2.09
PTP4A1P1-201ENST00000420539 BPTFQ12830 3046 aa2□□□□□ -2.09
PTP4A1P1-201ENST00000420539 A0A0D9SG42 100 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 LOC730098B7Z3J9 87 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 PIEZO2Q9H5I5 2752 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 C4AP0C0L4 1744 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 C4BP0C0L5 1744 aa1.99□□□□□ -2.09
PTP4A1P1-201ENST00000420539 DDX60Q8IY21 1712 aaKnown RBP1.98□□□□□ -2.09
PTP4A1P1-201ENST00000420539 SPINK4O60575 86 aa1.98□□□□□ -2.09
PTP4A1P1-201ENST00000420539 LELP1Q5T871 98 aa1.98□□□□□ -2.09
PTP4A1P1-201ENST00000420539 ROS1P08922 2347 aa1.98□□□□□ -2.09
PTP4A1P1-201ENST00000420539 COL6A6A6NMZ7 2263 aa1.98□□□□□ -2.09
PTP4A1P1-201ENST00000420539 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
PTP4A1P1-201ENST00000420539 ASH1LQ9NR48 2969 aaKnown RBP1.96□□□□□ -2.1
PTP4A1P1-201ENST00000420539 H0YAA0 97 aa1.95□□□□□ -2.1
PTP4A1P1-201ENST00000420539 SPRR1AP35321 89 aa1.95□□□□□ -2.1
PTP4A1P1-201ENST00000420539 IQGAP1P46940 1657 aa1.95□□□□□ -2.1
PTP4A1P1-201ENST00000420539 LYNX1G3V0Z9 82 aa1.94□□□□□ -2.1
PTP4A1P1-201ENST00000420539 ATP7AQ04656 1500 aa1.93□□□□□ -2.1
PTP4A1P1-201ENST00000420539 Q5VSD8 79 aa1.93□□□□□ -2.1
PTP4A1P1-201ENST00000420539 TMEM167BQ9NRX6 74 aa1.92□□□□□ -2.1
PTP4A1P1-201ENST00000420539 APLNQ9ULZ1 77 aa1.92□□□□□ -2.1
PTP4A1P1-201ENST00000420539 NFAT5O94916 1531 aa1.91□□□□□ -2.1
PTP4A1P1-201ENST00000420539 PTPRZ1P23471 2315 aaPredicted RBP1.91□□□□□ -2.1
PTP4A1P1-201ENST00000420539 KRTAP10-4P60372 401 aaPredicted RBP1.91□□□□□ -2.1
PTP4A1P1-201ENST00000420539 H1FX-AS1Q4G0G2 97 aa1.91□□□□□ -2.1
PTP4A1P1-201ENST00000420539 LINC00308Q8TCZ7 52 aa1.91□□□□□ -2.1
PTP4A1P1-201ENST00000420539 PTPRQQ9UMZ3 2332 aa1.9□□□□□ -2.11
PTP4A1P1-201ENST00000420539 USF3Q68DE3 2245 aa1.9□□□□□ -2.11
PTP4A1P1-201ENST00000420539 PRB3Q04118 309 aaPredicted RBP1.89□□□□□ -2.11
PTP4A1P1-201ENST00000420539 DEFB105AQ8NG35 78 aa1.89□□□□□ -2.11
PTP4A1P1-201ENST00000420539 LMO7Q8WWI1 1683 aa1.89□□□□□ -2.11
PTP4A1P1-201ENST00000420539 SPRR1BP22528 89 aa1.88□□□□□ -2.11
PTP4A1P1-201ENST00000420539 KRTAP21-3Q3LHN1 58 aa1.88□□□□□ -2.11
PTP4A1P1-201ENST00000420539 MINOS1Q5TGZ0 78 aa1.88□□□□□ -2.11
PTP4A1P1-201ENST00000420539 CDC42BPAQ5VT25 1732 aa1.88□□□□□ -2.11
PTP4A1P1-201ENST00000420539 C2CD3Q4AC94 2353 aa1.87□□□□□ -2.11
PTP4A1P1-201ENST00000420539 WFDC13Q8IUB5 93 aa1.87□□□□□ -2.11
PTP4A1P1-201ENST00000420539 KIF21BO75037 1637 aa1.87□□□□□ -2.11
PTP4A1P1-201ENST00000420539 SAMD9LQ8IVG5 1584 aa1.85□□□□□ -2.11
PTP4A1P1-201ENST00000420539 C6orf48Q9UBA6 75 aa1.83□□□□□ -2.12
PTP4A1P1-201ENST00000420539 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
PTP4A1P1-201ENST00000420539 TRIOBPQ9H2D6 2365 aa1.83□□□□□ -2.12
PTP4A1P1-201ENST00000420539 TFF3Q07654 80 aa1.82□□□□□ -2.12
PTP4A1P1-201ENST00000420539 IAPPP10997 89 aa1.81□□□□□ -2.12
PTP4A1P1-201ENST00000420539 KLK9Q2XQG4 91 aa1.81□□□□□ -2.12
PTP4A1P1-201ENST00000420539 SPTBN2O15020 2390 aa1.8□□□□□ -2.12
PTP4A1P1-201ENST00000420539 CACNA1HO95180 2353 aa1.8□□□□□ -2.12
PTP4A1P1-201ENST00000420539 DEFB130BP0DP73 79 aa1.79□□□□□ -2.12
PTP4A1P1-201ENST00000420539 DEFB130AP0DP74 79 aa1.79□□□□□ -2.12
PTP4A1P1-201ENST00000420539 ZNF462Q96JM2 2506 aa1.79□□□□□ -2.12
PTP4A1P1-201ENST00000420539 SNRPGP62308 76 aaKnown RBP1.78□□□□□ -2.12
PTP4A1P1-201ENST00000420539 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
PTP4A1P1-201ENST00000420539 RPS27LQ71UM5 84 aaKnown RBP1.77□□□□□ -2.13
PTP4A1P1-201ENST00000420539 SMIM2Q9BVW6 85 aa1.77□□□□□ -2.13
PTP4A1P1-201ENST00000420539 SPTBN1Q01082 2364 aaKnown RBP1.74□□□□□ -2.13
PTP4A1P1-201ENST00000420539 WNK2Q9Y3S1 2297 aa1.73□□□□□ -2.13
PTP4A1P1-201ENST00000420539 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PTP4A1P1-201ENST00000420539 PKDREJQ9NTG1 2253 aa1.72□□□□□ -2.13
PTP4A1P1-201ENST00000420539 TTC28Q96AY4 2481 aa1.71□□□□□ -2.14
PTP4A1P1-201ENST00000420539 REV3LO60673 3130 aa1.71□□□□□ -2.14
PTP4A1P1-201ENST00000420539 MEGF8Q7Z7M0 2845 aa1.71□□□□□ -2.14
PTP4A1P1-201ENST00000420539 ZNF292O60281 2723 aa1.7□□□□□ -2.14
PTP4A1P1-201ENST00000420539 DUOX1Q9NRD9 1551 aa1.69□□□□□ -2.14
PTP4A1P1-201ENST00000420539 NDUFA1O15239 70 aa1.69□□□□□ -2.14
PTP4A1P1-201ENST00000420539 HELZ2Q9BYK8 2649 aaKnown RBP1.68□□□□□ -2.14
PTP4A1P1-201ENST00000420539 POLQO75417 2590 aa1.67□□□□□ -2.14
PTP4A1P1-201ENST00000420539 KNL1Q8NG31 2342 aa1.67□□□□□ -2.14
PTP4A1P1-201ENST00000420539 GVINP1Q7Z2Y8 2422 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms