RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
SNHG3-201ENST00000413987 GIG44P09565 113 aaPredicted RBP6.36□□□□□ -1.39
SNHG3-201ENST00000413987 XCL1P47992 114 aa6.36□□□□□ -1.39
SNHG3-201ENST00000413987 COX7B2Q8TF08 81 aa6.36□□□□□ -1.39
SNHG3-201ENST00000413987 B9D2Q9BPU9 175 aa6.36□□□□□ -1.39
SNHG3-201ENST00000413987 RPL36AP83881 106 aaKnown RBP6.35□□□□□ -1.39
SNHG3-201ENST00000413987 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
SNHG3-201ENST00000413987 UBL5Q9BZL1 73 aa6.35□□□□□ -1.39
SNHG3-201ENST00000413987 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
SNHG3-201ENST00000413987 LINC00158P58513 81 aa6.35□□□□□ -1.39
SNHG3-201ENST00000413987 TRAV23DV6A0A075B6W5 121 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 NANOS2P60321 138 aaKnown RBP6.34□□□□□ -1.39
SNHG3-201ENST00000413987 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 NACAE9PAV3 2078 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 TRAV7A0A075B6U4 112 aa6.34□□□□□ -1.39
SNHG3-201ENST00000413987 IGLV8-61A0A075B6I0 122 aa6.33□□□□□ -1.4
SNHG3-201ENST00000413987 CCL18P55774 89 aa6.33□□□□□ -1.4
SNHG3-201ENST00000413987 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
SNHG3-201ENST00000413987 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
SNHG3-201ENST00000413987 MEGF8Q7Z7M0 2845 aa6.33□□□□□ -1.4
SNHG3-201ENST00000413987 CAMK2N2Q96S95 79 aa6.33□□□□□ -1.4
SNHG3-201ENST00000413987 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
SNHG3-201ENST00000413987 TRBV6-4A0A1B0GX49 114 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 C3orf84H3BNL1 204 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 H7BZZ5 65 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 INSP01308 110 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
SNHG3-201ENST00000413987 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 SLPIP03973 132 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 C7orf33Q8WU49 177 aa6.31□□□□□ -1.4
SNHG3-201ENST00000413987 NDUFC1O43677 76 aa6.3□□□□□ -1.4
SNHG3-201ENST00000413987 DEFB135Q30KP9 77 aa6.3□□□□□ -1.4
SNHG3-201ENST00000413987 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
SNHG3-201ENST00000413987 A6NN06 94 aa6.29□□□□□ -1.4
SNHG3-201ENST00000413987 DEFB4AO15263 64 aa6.29□□□□□ -1.4
SNHG3-201ENST00000413987 NTM-AS1Q6ZSK4 140 aa6.29□□□□□ -1.4
SNHG3-201ENST00000413987 Q8N814 137 aa6.29□□□□□ -1.4
SNHG3-201ENST00000413987 XAGE1AQ9HD64 81 aa6.29□□□□□ -1.4
SNHG3-201ENST00000413987 PRKDCP78527 4128 aaKnown RBP6.27□□□□□ -1.41
SNHG3-201ENST00000413987 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
SNHG3-201ENST00000413987 H3BQ85 93 aa6.26□□□□□ -1.41
SNHG3-201ENST00000413987 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
SNHG3-201ENST00000413987 NOP10Q9NPE3 64 aaKnown RBP6.26□□□□□ -1.41
SNHG3-201ENST00000413987 LOC110117498A0A087WWA1 95 aa6.25□□□□□ -1.41
SNHG3-201ENST00000413987 PDE6GP18545 87 aa6.25□□□□□ -1.41
SNHG3-201ENST00000413987 RBM3P98179 157 aaKnown RBP6.25□□□□□ -1.41
SNHG3-201ENST00000413987 Q6ZTI0 123 aa6.25□□□□□ -1.41
SNHG3-201ENST00000413987 LINC01547P58512 204 aaPredicted RBP6.24□□□□□ -1.41
SNHG3-201ENST00000413987 Q6ZQT0 140 aa6.24□□□□□ -1.41
SNHG3-201ENST00000413987 HUWE1Q7Z6Z7 4374 aaKnown RBP6.24□□□□□ -1.41
SNHG3-201ENST00000413987 F8WEM9 126 aa6.23□□□□□ -1.41
SNHG3-201ENST00000413987 K7EIL1 84 aa6.23□□□□□ -1.41
SNHG3-201ENST00000413987 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
SNHG3-201ENST00000413987 STAB2Q8WWQ8 2551 aa6.23□□□□□ -1.41
SNHG3-201ENST00000413987 DEFB130BP0DP73 79 aa6.22□□□□□ -1.41
SNHG3-201ENST00000413987 DEFB130AP0DP74 79 aa6.22□□□□□ -1.41
SNHG3-201ENST00000413987 LYSTQ99698 3801 aa6.21□□□□□ -1.41
SNHG3-201ENST00000413987 HAMPP81172 84 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 Q8IZM0 81 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 SNURFQ9Y675 71 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 ERC2-IT1O76042 136 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 COX17Q14061 63 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 C16orf74Q96GX8 76 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 DNAH9Q9NYC9 4486 aa6.21□□□□□ -1.42
SNHG3-201ENST00000413987 TRAV10A0A0B4J240 114 aa6.2□□□□□ -1.42
SNHG3-201ENST00000413987 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
SNHG3-201ENST00000413987 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
SNHG3-201ENST00000413987 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
SNHG3-201ENST00000413987 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 K7ERS5 55 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 MIFP14174 115 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 Q8NAQ8 132 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 Q8NBF4 154 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 TGP01266 2768 aa6.19□□□□□ -1.42
SNHG3-201ENST00000413987 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 IGLV4-60A0A075B6I1 120 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 KPRPQ5T749 579 aaPredicted RBP6.18□□□□□ -1.42
SNHG3-201ENST00000413987 Q8N3U1 123 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
SNHG3-201ENST00000413987 A0A087X002 238 aa6.17□□□□□ -1.42
SNHG3-201ENST00000413987 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
SNHG3-201ENST00000413987 A6NED7 52 aa6.16□□□□□ -1.42
SNHG3-201ENST00000413987 MUC7Q8TAX7 377 aa6.16□□□□□ -1.42
SNHG3-201ENST00000413987 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
SNHG3-201ENST00000413987 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
SNHG3-201ENST00000413987 HTN3P15516 51 aa6.15□□□□□ -1.42
SNHG3-201ENST00000413987 NREPQ16612 68 aa6.15□□□□□ -1.42
SNHG3-201ENST00000413987 TMEM254Q8TBM7 123 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms