RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NSD1Q96L73 2696 aaPredicted RBP1□□□□□ -2.25
HMGB3P31-201ENST00000413333 EP400Q96L91 3159 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 EFCAB5A4FU69 1503 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 MKI67P46013 3256 aaKnown RBP0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 GOLGB1Q14789 3259 aaKnown RBP0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 GNGT1P63211 74 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 ATP5EP2Q5VTU8 51 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 SPEGQ15772 3267 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 SLIT1O75093 1534 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 UBR3Q6ZT12 1888 aa0.99□□□□□ -2.25
HMGB3P31-201ENST00000413333 LRRC37AA6NMS7 1700 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 FAM186AA6NE01 2351 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 ABCA9Q8IUA7 1624 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 EIF2AK4Q9P2K8 1649 aaKnown RBP0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 UMAD1C9J7I0 102 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 UBE2DNLQ8IWF7 75 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 BOD1L1Q8NFC6 3051 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 CFAP54Q96N23 3096 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 ASXL1Q8IXJ9 1541 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 SPTA1P02549 2419 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 CACNA1EQ15878 2313 aa0.98□□□□□ -2.25
HMGB3P31-201ENST00000413333 THOC2Q8NI27 1593 aaKnown RBP0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 AKAP13Q12802 2813 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 A0A1B0GU69 56 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 A0A1B0GUT8 65 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 LRRC7Q96NW7 1537 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 ANK2Q01484 3957 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 CENPFP49454 3210 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 EP300Q09472 2414 aaPredicted RBP0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 PAPPAQ13219 1627 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 CCDC180Q9P1Z9 1646 aa0.97□□□□□ -2.25
HMGB3P31-201ENST00000413333 SPTBN5Q9NRC6 3674 aaKnown RBP0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 CDC42BPGQ6DT37 1551 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 F8P00451 2351 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 DOT1LQ8TEK3 1739 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 HTTP42858 3142 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 BRCA2P51587 3418 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 C5orf42Q9H799 3197 aa0.96□□□□□ -2.26
HMGB3P31-201ENST00000413333 PTPRZ1P23471 2315 aaPredicted RBP0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 ASPMQ8IZT6 3477 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 RIF1Q5UIP0 2472 aaKnown RBP0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 NHSQ6T4R5 1651 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 RELNP78509 3460 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 LINC00959A0A1B0GUT2 108 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 IFI27P40305 119 aaPredicted RBP0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 SSBP3-AS1Q7Z2R9 100 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 FAM103A1Q9BTL3 118 aaKnown RBP0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 NBEAQ8NFP9 2946 aa0.95□□□□□ -2.26
HMGB3P31-201ENST00000413333 MGAM2Q2M2H8 2515 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 CELSR1Q9NYQ6 3014 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 TSC2P49815 1807 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 HMCN1Q96RW7 5635 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 TIAM1Q13009 1591 aa0.94□□□□□ -2.26
HMGB3P31-201ENST00000413333 NESP48681 1621 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 HFM1A2PYH4 1435 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 A0A087WWC5 75 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 TRAV21A0A0B4J279 112 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 I3L2K1 104 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 IFI6P09912 130 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 HMGA1P17096 107 aaKnown RBP0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 S100A3P33764 101 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 ZNF469Q96JG9 3925 aaPredicted RBP0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 APCP25054 2843 aa0.93□□□□□ -2.26
HMGB3P31-201ENST00000413333 TENM2Q9NT68 2774 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 A0A087WXM4 84 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 NDUFB1O75438 58 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 DEFB112Q30KQ8 113 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 IGF2RP11717 2491 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 RICTORQ6R327 1708 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
HMGB3P31-201ENST00000413333 SPTBN1Q01082 2364 aaKnown RBP0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 ANKRD50Q9ULJ7 1429 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 LMTK2Q8IWU2 1503 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 LCE6AA0A183 80 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 COX8AP10176 69 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 S100ZQ8WXG8 99 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 NRAPQ86VF7 1730 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 DNHD1Q96M86 4753 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 RYR3Q15413 4870 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 ZANQ9Y493 2812 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 CELSR2Q9HCU4 2923 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 USF3Q68DE3 2245 aa0.91□□□□□ -2.26
HMGB3P31-201ENST00000413333 HYDINQ4G0P3 5121 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 DEFB123Q8N688 67 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 HILPDAQ9Y5L2 63 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 RALGAPBQ86X10 1494 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 CSMD1Q96PZ7 3565 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 DIP2AQ14689 1571 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 PREX1Q8TCU6 1659 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 FRYLO94915 3013 aa0.9□□□□□ -2.27
HMGB3P31-201ENST00000413333 TGP01266 2768 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms