RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 USH2AO75445 5202 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 CCL24O00175 119 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 NDUFA1O15239 70 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 LGALS3P17931 250 aaKnown RBP2.01□□□□□ -2.09
RGPD3-202ENST00000409886 DAD1P61803 113 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 RPS28P62857 69 aaKnown RBP2.01□□□□□ -2.09
RGPD3-202ENST00000409886 ATXN8Q156A1 80 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 RPL36ALQ969Q0 106 aaKnown RBP2.01□□□□□ -2.09
RGPD3-202ENST00000409886 APLNQ9ULZ1 77 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 F8WEM9 126 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 Q5VSD8 79 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 LCA10Q71F78 164 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 SND1-IT1Q9HBX3 110 aa2.01□□□□□ -2.09
RGPD3-202ENST00000409886 RPL36AP83881 106 aaKnown RBP2□□□□□ -2.09
RGPD3-202ENST00000409886 KLKP1Q107X0 134 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 PRR15Q8IV56 129 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 OCR1Q9BZK8 76 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 MINOS1-NBL1R4GNA1 71 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 TRAV16A0A0A6YYK6 109 aaPredicted RBP2□□□□□ -2.09
RGPD3-202ENST00000409886 LINC01547P58512 204 aaPredicted RBP2□□□□□ -2.09
RGPD3-202ENST00000409886 PIGBOS1A0A0B4J2F0 54 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 Q6ZVQ6 151 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 ERC2-IT1O76042 136 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 Q6ZQY7 126 aa2□□□□□ -2.09
RGPD3-202ENST00000409886 PSPHP1O15172 72 aa1.99□□□□□ -2.09
RGPD3-202ENST00000409886 SPANXA1Q9NS26 97 aa1.99□□□□□ -2.09
RGPD3-202ENST00000409886 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
RGPD3-202ENST00000409886 MIFP14174 115 aa1.99□□□□□ -2.09
RGPD3-202ENST00000409886 J3KT08 172 aa1.99□□□□□ -2.09
RGPD3-202ENST00000409886 Q6ZQT0 140 aa1.99□□□□□ -2.09
RGPD3-202ENST00000409886 FAM229AH3BQW9 127 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 MRPL53Q96EL3 112 aaKnown RBP1.98□□□□□ -2.09
RGPD3-202ENST00000409886 IMUPQ9GZP8 106 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 LENEPQ9Y5L5 61 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 A0A1W2PRX2 142 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 LCE2AQ5TA79 106 aaPredicted RBP1.98□□□□□ -2.09
RGPD3-202ENST00000409886 TRBV10-1A0A0K0K1A3 114 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 A8MUN3 132 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 PLA2G1BP04054 148 aaKnown RBP1.98□□□□□ -2.09
RGPD3-202ENST00000409886 TRBV7-6A0A0J9YX20 115 aa1.98□□□□□ -2.09
RGPD3-202ENST00000409886 A0A087X002 238 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 TRBV6-4A0A1B0GX49 114 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 IGLV1-51P01701 117 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 NOTCH2NLQ7Z3S9 236 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 C1orf64Q8NEQ6 169 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 TRACP01848 142 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 C1orf134Q5TEV5 83 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 Q6JHZ5 121 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 ZCCHC13Q8WW36 166 aaKnown RBP1.97□□□□□ -2.09
RGPD3-202ENST00000409886 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 FUSP35637 526 aaKnown RBP eCLIP1.97□□□□□ -2.09
RGPD3-202ENST00000409886 Q8N814 137 aa1.97□□□□□ -2.09
RGPD3-202ENST00000409886 NOP10Q9NPE3 64 aaKnown RBP1.97□□□□□ -2.09
RGPD3-202ENST00000409886 NDUFA4O00483 81 aa1.96□□□□□ -2.09
RGPD3-202ENST00000409886 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.09
RGPD3-202ENST00000409886 FAM168BA1KXE4 195 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 DSCR10P59022 87 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 HAMPP81172 84 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 RNF5Q99942 180 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 OVOL2Q9BRP0 275 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 PRO0628Q9UI54 55 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 MOB4Q9Y3A3 225 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 MAP6D1Q9H9H5 199 aa1.96□□□□□ -2.1
RGPD3-202ENST00000409886 TRGV2A0A075B6R0 118 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 TRGV1A0A0A0MS02 117 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 TRBV10-3A0A0K0K1G6 114 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 SEC61GP60059 68 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 TMEM254Q8TBM7 123 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 LINC00959A0A1B0GUT2 108 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 K7EQD1 137 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 TMEM258P61165 79 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 Q8N377 158 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 TIMM17BO60830 172 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 LINC00167Q96N53 147 aa1.95□□□□□ -2.1
RGPD3-202ENST00000409886 Q5VV11 94 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 Q9BRP9 147 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 PANO1I0J062 215 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 APOC4P55056 127 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 RPL37AP61513 92 aaKnown RBP1.94□□□□□ -2.1
RGPD3-202ENST00000409886 DEFB114Q30KQ6 69 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 K7EQZ3 153 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 ATOX1O00244 68 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 LINC00158P58513 81 aa1.94□□□□□ -2.1
RGPD3-202ENST00000409886 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 DEFB130BP0DP73 79 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 DEFB130AP0DP74 79 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 LINC00575Q6W349 94 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 OR13C6PQ8NH95 151 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 C6orf48Q9UBA6 75 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 IGHV4-28A0A0C4DH34 117 aa1.93□□□□□ -2.1
RGPD3-202ENST00000409886 KHDC1LQ5JSQ8 128 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms