RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 IGLV1-50A0A075B6I6 118 aa10.83□□□□□ -0.68
NUP50-202ENST00000396096 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
NUP50-202ENST00000396096 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
NUP50-202ENST00000396096 M0R2N4 97 aa10.82□□□□□ -0.68
NUP50-202ENST00000396096 SPRR1AP35321 89 aa10.82□□□□□ -0.68
NUP50-202ENST00000396096 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
NUP50-202ENST00000396096 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
NUP50-202ENST00000396096 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
NUP50-202ENST00000396096 ATOX1O00244 68 aa10.81□□□□□ -0.68
NUP50-202ENST00000396096 B5MCH6 92 aa10.81□□□□□ -0.68
NUP50-202ENST00000396096 MDFIQ99750 246 aa10.81□□□□□ -0.68
NUP50-202ENST00000396096 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
NUP50-202ENST00000396096 Q6ZRX8 168 aa10.79□□□□□ -0.68
NUP50-202ENST00000396096 CNBPP62633 177 aaKnown RBP10.78□□□□□ -0.68
NUP50-202ENST00000396096 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
NUP50-202ENST00000396096 A0A087WVE0 104 aa10.77□□□□□ -0.69
NUP50-202ENST00000396096 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
NUP50-202ENST00000396096 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
NUP50-202ENST00000396096 RPL37AP8A6NKH3 93 aa10.76□□□□□ -0.69
NUP50-202ENST00000396096 UQCRQO14949 82 aa10.76□□□□□ -0.69
NUP50-202ENST00000396096 Q6ZVQ6 151 aa10.76□□□□□ -0.69
NUP50-202ENST00000396096 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
NUP50-202ENST00000396096 C3orf22Q8N5N4 141 aa10.76□□□□□ -0.69
NUP50-202ENST00000396096 STAB2Q8WWQ8 2551 aa10.75□□□□□ -0.69
NUP50-202ENST00000396096 ETDCA0A1B0GVM5 59 aa10.74□□□□□ -0.69
NUP50-202ENST00000396096 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
NUP50-202ENST00000396096 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
NUP50-202ENST00000396096 Q8N377 158 aa10.74□□□□□ -0.69
NUP50-202ENST00000396096 Q9BRP9 147 aa10.74□□□□□ -0.69
NUP50-202ENST00000396096 COX7CP15954 63 aa10.74□□□□□ -0.69
NUP50-202ENST00000396096 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 C16orf90A8MZG2 172 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 PSCAO43653 123 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 CXCL6P80162 114 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 C14orf177Q52M58 125 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
NUP50-202ENST00000396096 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.69
NUP50-202ENST00000396096 A0A096LNI7 61 aa10.7□□□□□ -0.7
NUP50-202ENST00000396096 HAMPP81172 84 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 SS18L2Q9UHA2 77 aa10.68□□□□□ -0.7
NUP50-202ENST00000396096 CRYGAP11844 174 aa10.66□□□□□ -0.7
NUP50-202ENST00000396096 TNP2Q05952 138 aa10.66□□□□□ -0.7
NUP50-202ENST00000396096 BCE1O60756 84 aa10.64□□□□□ -0.71
NUP50-202ENST00000396096 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
NUP50-202ENST00000396096 A0A1B0GW54 56 aa10.64□□□□□ -0.71
NUP50-202ENST00000396096 A0A1W2PNN7 141 aa10.64□□□□□ -0.71
NUP50-202ENST00000396096 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
NUP50-202ENST00000396096 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
NUP50-202ENST00000396096 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
NUP50-202ENST00000396096 LRCOL1A6NCL2 159 aa10.62□□□□□ -0.71
NUP50-202ENST00000396096 UBE2BP63146 152 aa10.62□□□□□ -0.71
NUP50-202ENST00000396096 PKIGQ9Y2B9 76 aa10.61□□□□□ -0.71
NUP50-202ENST00000396096 DNAH10Q8IVF4 4471 aa10.6□□□□□ -0.71
NUP50-202ENST00000396096 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
NUP50-202ENST00000396096 LYSTQ99698 3801 aa10.6□□□□□ -0.71
NUP50-202ENST00000396096 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
NUP50-202ENST00000396096 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
NUP50-202ENST00000396096 NREPQ16612 68 aa10.57□□□□□ -0.72
NUP50-202ENST00000396096 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
NUP50-202ENST00000396096 A0A1W2PNM2 257 aa10.57□□□□□ -0.72
NUP50-202ENST00000396096 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUP50-202ENST00000396096 CSMD3Q7Z407 3707 aa10.57□□□□□ -0.72
NUP50-202ENST00000396096 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
NUP50-202ENST00000396096 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
NUP50-202ENST00000396096 Q8NBF4 154 aa10.55□□□□□ -0.72
NUP50-202ENST00000396096 PLECQ15149 4684 aaKnown RBP10.55□□□□□ -0.72
NUP50-202ENST00000396096 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
NUP50-202ENST00000396096 C3orf84H3BNL1 204 aa10.54□□□□□ -0.72
NUP50-202ENST00000396096 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
NUP50-202ENST00000396096 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
NUP50-202ENST00000396096 H0Y9J4 135 aa10.53□□□□□ -0.72
NUP50-202ENST00000396096 LINC00474Q9P2X8 69 aa10.53□□□□□ -0.72
NUP50-202ENST00000396096 DNHD1Q96M86 4753 aa10.52□□□□□ -0.73
NUP50-202ENST00000396096 DNAH7Q8WXX0 4024 aa10.52□□□□□ -0.73
NUP50-202ENST00000396096 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.73
NUP50-202ENST00000396096 PRLHP81277 87 aa10.52□□□□□ -0.73
NUP50-202ENST00000396096 PHF5AQ7RTV0 110 aaKnown RBP10.52□□□□□ -0.73
NUP50-202ENST00000396096 IGLV8-61A0A075B6I0 122 aa10.5□□□□□ -0.73
NUP50-202ENST00000396096 BPY2O14599 106 aa10.5□□□□□ -0.73
NUP50-202ENST00000396096 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
NUP50-202ENST00000396096 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
NUP50-202ENST00000396096 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
NUP50-202ENST00000396096 F8WEM9 126 aa10.49□□□□□ -0.73
NUP50-202ENST00000396096 KRTAP21-3Q3LHN1 58 aa10.48□□□□□ -0.73
NUP50-202ENST00000396096 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
NUP50-202ENST00000396096 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
NUP50-202ENST00000396096 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
NUP50-202ENST00000396096 TENM2Q9NT68 2774 aa10.46□□□□□ -0.73
NUP50-202ENST00000396096 EPM2AB3EWF7 344 aa10.46□□□□□ -0.74
NUP50-202ENST00000396096 SPRR1BP22528 89 aa10.46□□□□□ -0.74
NUP50-202ENST00000396096 TMEM258P61165 79 aa10.44□□□□□ -0.74
NUP50-202ENST00000396096 Q8N9L7 120 aa10.44□□□□□ -0.74
NUP50-202ENST00000396096 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
NUP50-202ENST00000396096 STARD9Q9P2P6 4700 aa10.43□□□□□ -0.74
NUP50-202ENST00000396096 PANO1I0J062 215 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms