RNA–Protein interactions for RNA: ENST00000395445.5

PCDH15-213, Transcript of protocadherin related 15, humanhuman

TSL 1 (best) BASIC

Gene PCDH15, Length 5,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-213ENST00000395445 K7EIL1 84 aa4.48□□□□□ -1.69
PCDH15-213ENST00000395445 SPINK7P58062 85 aa4.48□□□□□ -1.69
PCDH15-213ENST00000395445 KRTAP10-11P60412 298 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 PTPRQQ9UMZ3 2332 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 LAMA3Q16787 3333 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 SZT2Q5T011 3432 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 H3BS24 57 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
PCDH15-213ENST00000395445 SPRR4Q96PI1 79 aa4.46□□□□□ -1.69
PCDH15-213ENST00000395445 RANBP2P49792 3224 aaKnown RBP4.46□□□□□ -1.7
PCDH15-213ENST00000395445 LAMA2P24043 3122 aaKnown RBP4.44□□□□□ -1.7
PCDH15-213ENST00000395445 Q5VSD8 79 aa4.44□□□□□ -1.7
PCDH15-213ENST00000395445 DMAC1Q96GE9 116 aa4.44□□□□□ -1.7
PCDH15-213ENST00000395445 MKI67P46013 3256 aaKnown RBP4.44□□□□□ -1.7
PCDH15-213ENST00000395445 Q8N377 158 aa4.44□□□□□ -1.7
PCDH15-213ENST00000395445 LINC00612Q8N6U2 182 aa4.43□□□□□ -1.7
PCDH15-213ENST00000395445 R4GN34 69 aa4.43□□□□□ -1.7
PCDH15-213ENST00000395445 ACACAQ13085 2346 aa4.43□□□□□ -1.7
PCDH15-213ENST00000395445 VCANP13611 3396 aa4.42□□□□□ -1.7
PCDH15-213ENST00000395445 MUC4Q99102 2169 aa4.42□□□□□ -1.7
PCDH15-213ENST00000395445 UNC80Q8N2C7 3258 aa4.42□□□□□ -1.7
PCDH15-213ENST00000395445 SPANXA2-OT1Q8N9U9 137 aa4.42□□□□□ -1.7
PCDH15-213ENST00000395445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.41□□□□□ -1.7
PCDH15-213ENST00000395445 COL6A3P12111 3177 aa4.41□□□□□ -1.7
PCDH15-213ENST00000395445 MED13LQ71F56 2210 aa4.41□□□□□ -1.7
PCDH15-213ENST00000395445 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.7
PCDH15-213ENST00000395445 PCNX1Q96RV3 2341 aa4.4□□□□□ -1.71
PCDH15-213ENST00000395445 CDH23Q9H251 3354 aa4.39□□□□□ -1.71
PCDH15-213ENST00000395445 CACNA1HO95180 2353 aa4.39□□□□□ -1.71
PCDH15-213ENST00000395445 CNOT1A5YKK6 2376 aaKnown RBP4.38□□□□□ -1.71
PCDH15-213ENST00000395445 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
PCDH15-213ENST00000395445 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
PCDH15-213ENST00000395445 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
PCDH15-213ENST00000395445 CFAP54Q96N23 3096 aa4.36□□□□□ -1.71
PCDH15-213ENST00000395445 COL27A1Q8IZC6 1860 aaPredicted RBP4.35□□□□□ -1.71
PCDH15-213ENST00000395445 M0QZ58 72 aa4.35□□□□□ -1.71
PCDH15-213ENST00000395445 CNBPP62633 177 aaKnown RBP4.35□□□□□ -1.71
PCDH15-213ENST00000395445 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
PCDH15-213ENST00000395445 SPTAN1Q13813 2472 aaKnown RBP4.35□□□□□ -1.71
PCDH15-213ENST00000395445 TNP2Q05952 138 aa4.35□□□□□ -1.71
PCDH15-213ENST00000395445 CASC10Q5T4H9 136 aa4.35□□□□□ -1.71
PCDH15-213ENST00000395445 VPS13AQ96RL7 3174 aa4.34□□□□□ -1.71
PCDH15-213ENST00000395445 NBEAQ8NFP9 2946 aa4.34□□□□□ -1.71
PCDH15-213ENST00000395445 Q5VV11 94 aa4.34□□□□□ -1.71
PCDH15-213ENST00000395445 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
PCDH15-213ENST00000395445 CREBBPQ92793 2442 aa4.33□□□□□ -1.72
PCDH15-213ENST00000395445 A8MU10 97 aa4.32□□□□□ -1.72
PCDH15-213ENST00000395445 A0A1W2PNM2 257 aa4.32□□□□□ -1.72
PCDH15-213ENST00000395445 ROMO1P60602 79 aa4.32□□□□□ -1.72
PCDH15-213ENST00000395445 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
PCDH15-213ENST00000395445 HTTP42858 3142 aa4.31□□□□□ -1.72
PCDH15-213ENST00000395445 SPEGQ15772 3267 aa4.31□□□□□ -1.72
PCDH15-213ENST00000395445 A0A096LNT2 108 aa4.3□□□□□ -1.72
PCDH15-213ENST00000395445 Q75L30 129 aa4.3□□□□□ -1.72
PCDH15-213ENST00000395445 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
PCDH15-213ENST00000395445 KRTAP10-3P60369 221 aa4.3□□□□□ -1.72
PCDH15-213ENST00000395445 MYO15AQ9UKN7 3530 aa4.3□□□□□ -1.72
PCDH15-213ENST00000395445 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
PCDH15-213ENST00000395445 C2CD3Q4AC94 2353 aa4.29□□□□□ -1.72
PCDH15-213ENST00000395445 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
PCDH15-213ENST00000395445 CHD7Q9P2D1 2997 aa4.29□□□□□ -1.72
PCDH15-213ENST00000395445 CUL9Q8IWT3 2517 aa4.28□□□□□ -1.72
PCDH15-213ENST00000395445 TRIOO75962 3097 aa4.28□□□□□ -1.72
PCDH15-213ENST00000395445 FREM2Q5SZK8 3169 aa4.27□□□□□ -1.73
PCDH15-213ENST00000395445 SPTBN5Q9NRC6 3674 aaKnown RBP4.27□□□□□ -1.73
PCDH15-213ENST00000395445 KLK9Q2XQG4 91 aa4.27□□□□□ -1.73
PCDH15-213ENST00000395445 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
PCDH15-213ENST00000395445 WNK1Q9H4A3 2382 aa4.27□□□□□ -1.73
PCDH15-213ENST00000395445 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
PCDH15-213ENST00000395445 RIF1Q5UIP0 2472 aaKnown RBP4.27□□□□□ -1.73
PCDH15-213ENST00000395445 FRYQ5TBA9 3013 aa4.26□□□□□ -1.73
PCDH15-213ENST00000395445 CELSR3Q9NYQ7 3312 aa4.26□□□□□ -1.73
PCDH15-213ENST00000395445 PRRC2CQ9Y520 2896 aaKnown RBP4.25□□□□□ -1.73
PCDH15-213ENST00000395445 A6NN06 94 aa4.25□□□□□ -1.73
PCDH15-213ENST00000395445 GVINP1Q7Z2Y8 2422 aa4.24□□□□□ -1.73
PCDH15-213ENST00000395445 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
PCDH15-213ENST00000395445 Q5W150 140 aa4.23□□□□□ -1.73
PCDH15-213ENST00000395445 TTC28Q96AY4 2481 aa4.23□□□□□ -1.73
PCDH15-213ENST00000395445 WDFY4Q6ZS81 3184 aa4.23□□□□□ -1.73
PCDH15-213ENST00000395445 OTOGLQ3ZCN5 2332 aa4.23□□□□□ -1.73
PCDH15-213ENST00000395445 LAMA1P25391 3075 aa4.22□□□□□ -1.73
PCDH15-213ENST00000395445 FAM208BQ5VWN6 2430 aa4.21□□□□□ -1.74
PCDH15-213ENST00000395445 ATRXP46100 2492 aa4.21□□□□□ -1.74
PCDH15-213ENST00000395445 PIEZO1Q92508 2521 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 CSPG4Q6UVK1 2322 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 MGAQ8IWI9 3026 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 GPR179Q6PRD1 2367 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 MUC6Q6W4X9 2439 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 PLAC8Q9NZF1 115 aa4.2□□□□□ -1.74
PCDH15-213ENST00000395445 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
PCDH15-213ENST00000395445 WDFY3Q8IZQ1 3526 aa4.19□□□□□ -1.74
PCDH15-213ENST00000395445 KRTAP16-1A8MUX0 517 aa4.19□□□□□ -1.74
PCDH15-213ENST00000395445 BDP1A6H8Y1 2624 aa4.19□□□□□ -1.74
PCDH15-213ENST00000395445 FRYLO94915 3013 aa4.19□□□□□ -1.74
PCDH15-213ENST00000395445 REV3LO60673 3130 aa4.18□□□□□ -1.74
PCDH15-213ENST00000395445 Q8NDZ9 215 aa4.18□□□□□ -1.74
PCDH15-213ENST00000395445 ZFHX2Q9C0A1 2572 aaPredicted RBP4.18□□□□□ -1.74
PCDH15-213ENST00000395445 SPATA8Q6RVD6 105 aa4.17□□□□□ -1.74
PCDH15-213ENST00000395445 NBASA2RRP1 2371 aa4.16□□□□□ -1.74
PCDH15-213ENST00000395445 TNRC18O15417 2968 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms