RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 COX7BP24311 80 aa9.55□□□□□ -0.88
CCT4-201ENST00000394440 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
CCT4-201ENST00000394440 DNAH6Q9C0G6 4158 aa9.54□□□□□ -0.88
CCT4-201ENST00000394440 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
CCT4-201ENST00000394440 FAM19A5Q7Z5A7 132 aaPredicted RBP9.54□□□□□ -0.88
CCT4-201ENST00000394440 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
CCT4-201ENST00000394440 SNCGO76070 127 aa9.53□□□□□ -0.88
CCT4-201ENST00000394440 A0A087WTM6 91 aa9.52□□□□□ -0.88
CCT4-201ENST00000394440 MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.88
CCT4-201ENST00000394440 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.88
CCT4-201ENST00000394440 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.88
CCT4-201ENST00000394440 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
CCT4-201ENST00000394440 IGKV2-24A0A0C4DH68 120 aa9.51□□□□□ -0.89
CCT4-201ENST00000394440 PRYO14603 147 aa9.51□□□□□ -0.89
CCT4-201ENST00000394440 SPRR1AP35321 89 aa9.51□□□□□ -0.89
CCT4-201ENST00000394440 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
CCT4-201ENST00000394440 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 CDIP1Q9H305 208 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 TMEM256-PLSCR3K7ERE1 68 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 LY6G6CO95867 125 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
CCT4-201ENST00000394440 Q6ZQY7 126 aa9.49□□□□□ -0.89
CCT4-201ENST00000394440 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
CCT4-201ENST00000394440 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
CCT4-201ENST00000394440 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
CCT4-201ENST00000394440 B5MCH6 92 aa9.48□□□□□ -0.89
CCT4-201ENST00000394440 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
CCT4-201ENST00000394440 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
CCT4-201ENST00000394440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.48□□□□□ -0.89
CCT4-201ENST00000394440 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
CCT4-201ENST00000394440 DNAH17Q9UFH2 4485 aa9.47□□□□□ -0.89
CCT4-201ENST00000394440 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
CCT4-201ENST00000394440 RYR2Q92736 4967 aa9.46□□□□□ -0.9
CCT4-201ENST00000394440 Q6ZRX8 168 aa9.45□□□□□ -0.9
CCT4-201ENST00000394440 LCE6AA0A183 80 aa9.45□□□□□ -0.9
CCT4-201ENST00000394440 H3BQ85 93 aa9.44□□□□□ -0.9
CCT4-201ENST00000394440 C14orf132Q9NPU4 83 aa9.44□□□□□ -0.9
CCT4-201ENST00000394440 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
CCT4-201ENST00000394440 PANO1I0J062 215 aa9.43□□□□□ -0.9
CCT4-201ENST00000394440 LINC00474Q9P2X8 69 aa9.43□□□□□ -0.9
CCT4-201ENST00000394440 HECTD4Q9Y4D8 3996 aa9.43□□□□□ -0.9
CCT4-201ENST00000394440 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
CCT4-201ENST00000394440 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
CCT4-201ENST00000394440 Q9BRP9 147 aa9.42□□□□□ -0.9
CCT4-201ENST00000394440 RTL8CO15255 209 aa9.41□□□□□ -0.9
CCT4-201ENST00000394440 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
CCT4-201ENST00000394440 EPM2AB3EWF7 344 aa9.4□□□□□ -0.9
CCT4-201ENST00000394440 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
CCT4-201ENST00000394440 GHRHP01286 108 aa9.4□□□□□ -0.91
CCT4-201ENST00000394440 ACYP1P07311 99 aa9.4□□□□□ -0.91
CCT4-201ENST00000394440 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.91
CCT4-201ENST00000394440 XGP55808 180 aa9.39□□□□□ -0.91
CCT4-201ENST00000394440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
CCT4-201ENST00000394440 FUSP35637 526 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCT4-201ENST00000394440 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
CCT4-201ENST00000394440 FRAS1Q86XX4 4008 aa9.38□□□□□ -0.91
CCT4-201ENST00000394440 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
CCT4-201ENST00000394440 TNP2Q05952 138 aa9.37□□□□□ -0.91
CCT4-201ENST00000394440 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
CCT4-201ENST00000394440 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
CCT4-201ENST00000394440 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
CCT4-201ENST00000394440 RBM3P98179 157 aaKnown RBP9.35□□□□□ -0.91
CCT4-201ENST00000394440 MT-ATP8P03928 68 aa9.35□□□□□ -0.91
CCT4-201ENST00000394440 SEC61GP60059 68 aa9.35□□□□□ -0.91
CCT4-201ENST00000394440 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
CCT4-201ENST00000394440 CCKP06307 115 aa9.34□□□□□ -0.91
CCT4-201ENST00000394440 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
CCT4-201ENST00000394440 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
CCT4-201ENST00000394440 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
CCT4-201ENST00000394440 UBE2BP63146 152 aa9.34□□□□□ -0.91
CCT4-201ENST00000394440 Q8N377 158 aa9.34□□□□□ -0.91
CCT4-201ENST00000394440 IGLV5-48A0A075B6I7 105 aa9.33□□□□□ -0.92
CCT4-201ENST00000394440 LOC110117498A0A087WWA1 95 aa9.33□□□□□ -0.92
CCT4-201ENST00000394440 Q6ZQT0 140 aa9.32□□□□□ -0.92
CCT4-201ENST00000394440 FAM19A1Q7Z5A9 133 aa9.32□□□□□ -0.92
CCT4-201ENST00000394440 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CCT4-201ENST00000394440 PRLHP81277 87 aa9.31□□□□□ -0.92
CCT4-201ENST00000394440 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
CCT4-201ENST00000394440 ST20-AS1Q8NBB2 130 aa9.31□□□□□ -0.92
CCT4-201ENST00000394440 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
CCT4-201ENST00000394440 H0Y9J4 135 aa9.3□□□□□ -0.92
CCT4-201ENST00000394440 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 DSCR8Q96T75 97 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
CCT4-201ENST00000394440 PDE6GP18545 87 aa9.28□□□□□ -0.92
CCT4-201ENST00000394440 ANAPC13Q9BS18 74 aa9.28□□□□□ -0.92
CCT4-201ENST00000394440 KRTAP10-2P60368 255 aa9.28□□□□□ -0.92
CCT4-201ENST00000394440 FAT2Q9NYQ8 4349 aa9.28□□□□□ -0.92
CCT4-201ENST00000394440 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
CCT4-201ENST00000394440 KRTAP13-1Q8IUC0 172 aa9.26□□□□□ -0.93
CCT4-201ENST00000394440 LINC00643Q86TS7 51 aa9.26□□□□□ -0.93
CCT4-201ENST00000394440 BCE1O60756 84 aa9.25□□□□□ -0.93
CCT4-201ENST00000394440 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
CCT4-201ENST00000394440 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
CCT4-201ENST00000394440 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms