RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 A0A1B0GV72 72 aa12.12□□□□□ -0.47
CLDND1-203ENST00000394181 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
CLDND1-203ENST00000394181 HYDINQ4G0P3 5121 aa12.11□□□□□ -0.47
CLDND1-203ENST00000394181 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
CLDND1-203ENST00000394181 DNAH6Q9C0G6 4158 aa12.1□□□□□ -0.47
CLDND1-203ENST00000394181 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
CLDND1-203ENST00000394181 TRBV7-6A0A0J9YX20 115 aa12.09□□□□□ -0.47
CLDND1-203ENST00000394181 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
CLDND1-203ENST00000394181 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
CLDND1-203ENST00000394181 PANO1I0J062 215 aa12.09□□□□□ -0.47
CLDND1-203ENST00000394181 Q6ZQY7 126 aa12.09□□□□□ -0.47
CLDND1-203ENST00000394181 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
CLDND1-203ENST00000394181 ALMS1Q8TCU4 4167 aa12.08□□□□□ -0.48
CLDND1-203ENST00000394181 C1orf134Q5TEV5 83 aa12.07□□□□□ -0.48
CLDND1-203ENST00000394181 SNCGO76070 127 aa12.06□□□□□ -0.48
CLDND1-203ENST00000394181 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
CLDND1-203ENST00000394181 KRTAP4-16G5E9R7 235 aaPredicted RBP12.05□□□□□ -0.48
CLDND1-203ENST00000394181 CBY1Q9Y3M2 126 aa12.05□□□□□ -0.48
CLDND1-203ENST00000394181 OBSCN-AS1Q96MR7 158 aa12.05□□□□□ -0.48
CLDND1-203ENST00000394181 C14orf132Q9NPU4 83 aa12.05□□□□□ -0.48
CLDND1-203ENST00000394181 TMEM256-PLSCR3K7ERE1 68 aa12.03□□□□□ -0.48
CLDND1-203ENST00000394181 PRYO14603 147 aa12.03□□□□□ -0.48
CLDND1-203ENST00000394181 SPRR1AP35321 89 aa12.03□□□□□ -0.48
CLDND1-203ENST00000394181 KRTAP11-1Q8IUC1 163 aa12.02□□□□□ -0.48
CLDND1-203ENST00000394181 B5MCH6 92 aa12.02□□□□□ -0.49
CLDND1-203ENST00000394181 PHF5AQ7RTV0 110 aaKnown RBP12.02□□□□□ -0.49
CLDND1-203ENST00000394181 Q9BRP9 147 aa12.01□□□□□ -0.49
CLDND1-203ENST00000394181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
CLDND1-203ENST00000394181 C3orf84H3BNL1 204 aa12□□□□□ -0.49
CLDND1-203ENST00000394181 TNP2Q05952 138 aa11.99□□□□□ -0.49
CLDND1-203ENST00000394181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.99□□□□□ -0.49
CLDND1-203ENST00000394181 RTL8CO15255 209 aa11.99□□□□□ -0.49
CLDND1-203ENST00000394181 Q6ZRX8 168 aa11.99□□□□□ -0.49
CLDND1-203ENST00000394181 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
CLDND1-203ENST00000394181 ETDCA0A1B0GVM5 59 aa11.98□□□□□ -0.49
CLDND1-203ENST00000394181 REG3GQ6UW15 175 aa11.98□□□□□ -0.49
CLDND1-203ENST00000394181 INAFM2P0DMQ5 153 aa11.98□□□□□ -0.49
CLDND1-203ENST00000394181 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
CLDND1-203ENST00000394181 XGP55808 180 aa11.96□□□□□ -0.5
CLDND1-203ENST00000394181 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.5
CLDND1-203ENST00000394181 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
CLDND1-203ENST00000394181 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
CLDND1-203ENST00000394181 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
CLDND1-203ENST00000394181 FAT2Q9NYQ8 4349 aa11.94□□□□□ -0.5
CLDND1-203ENST00000394181 DEFB105AQ8NG35 78 aa11.94□□□□□ -0.5
CLDND1-203ENST00000394181 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
CLDND1-203ENST00000394181 MT-ATP8P03928 68 aa11.93□□□□□ -0.5
CLDND1-203ENST00000394181 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
CLDND1-203ENST00000394181 SRRM2Q9UQ35 2752 aaKnown RBP11.93□□□□□ -0.5
CLDND1-203ENST00000394181 DNAH5Q8TE73 4624 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 ST20-AS1Q8NBB2 130 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 SACSQ9NZJ4 4579 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 UBE2BP63146 152 aa11.92□□□□□ -0.5
CLDND1-203ENST00000394181 IGLV5-52A0A0A0MRZ9 124 aa11.91□□□□□ -0.5
CLDND1-203ENST00000394181 PRLHP81277 87 aa11.91□□□□□ -0.5
CLDND1-203ENST00000394181 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
CLDND1-203ENST00000394181 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
CLDND1-203ENST00000394181 DNAH8Q96JB1 4490 aa11.91□□□□□ -0.5
CLDND1-203ENST00000394181 LINC01547P58512 204 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-203ENST00000394181 PKD1P98161 4303 aa11.89□□□□□ -0.51
CLDND1-203ENST00000394181 Q8N377 158 aa11.89□□□□□ -0.51
CLDND1-203ENST00000394181 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
CLDND1-203ENST00000394181 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
CLDND1-203ENST00000394181 FAM19A1Q7Z5A9 133 aa11.89□□□□□ -0.51
CLDND1-203ENST00000394181 RBM3P98179 157 aaKnown RBP11.88□□□□□ -0.51
CLDND1-203ENST00000394181 NDUFV3P56181 108 aaKnown RBP11.88□□□□□ -0.51
CLDND1-203ENST00000394181 CCKP06307 115 aa11.86□□□□□ -0.51
CLDND1-203ENST00000394181 C3orf22Q8N5N4 141 aa11.86□□□□□ -0.51
CLDND1-203ENST00000394181 EPM2AB3EWF7 344 aa11.85□□□□□ -0.51
CLDND1-203ENST00000394181 H3BQ85 93 aa11.85□□□□□ -0.51
CLDND1-203ENST00000394181 ACYP1P07311 99 aa11.85□□□□□ -0.51
CLDND1-203ENST00000394181 PCP4P48539 62 aa11.84□□□□□ -0.51
CLDND1-203ENST00000394181 Q6ZQT0 140 aa11.84□□□□□ -0.51
CLDND1-203ENST00000394181 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
CLDND1-203ENST00000394181 GHRHP01286 108 aa11.82□□□□□ -0.52
CLDND1-203ENST00000394181 HIGD2AQ9BW72 106 aa11.82□□□□□ -0.52
CLDND1-203ENST00000394181 C21orf62-AS1Q17RA5 79 aa11.81□□□□□ -0.52
CLDND1-203ENST00000394181 LOC110117498A0A087WWA1 95 aa11.81□□□□□ -0.52
CLDND1-203ENST00000394181 DSCR8Q96T75 97 aa11.81□□□□□ -0.52
CLDND1-203ENST00000394181 IGLV5-48A0A075B6I7 105 aa11.8□□□□□ -0.52
CLDND1-203ENST00000394181 TRBV7-4A0A0J9YYF1 115 aa11.78□□□□□ -0.52
CLDND1-203ENST00000394181 PLAC8Q9NZF1 115 aa11.78□□□□□ -0.52
CLDND1-203ENST00000394181 FAM30AQ9NZY2 134 aa11.78□□□□□ -0.52
CLDND1-203ENST00000394181 BCE1O60756 84 aa11.75□□□□□ -0.53
CLDND1-203ENST00000394181 UBE2AP49459 152 aa11.75□□□□□ -0.53
CLDND1-203ENST00000394181 SMIM29Q86T20 159 aa11.74□□□□□ -0.53
CLDND1-203ENST00000394181 H0Y9J4 135 aa11.73□□□□□ -0.53
CLDND1-203ENST00000394181 KRTAP13-1Q8IUC0 172 aa11.73□□□□□ -0.53
CLDND1-203ENST00000394181 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
CLDND1-203ENST00000394181 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
CLDND1-203ENST00000394181 KRTAP10-1P60331 282 aa11.71□□□□□ -0.53
CLDND1-203ENST00000394181 HAMPP81172 84 aa11.71□□□□□ -0.54
CLDND1-203ENST00000394181 KMT2CQ8NEZ4 4911 aaKnown RBP11.7□□□□□ -0.54
CLDND1-203ENST00000394181 PDE6GP18545 87 aa11.69□□□□□ -0.54
CLDND1-203ENST00000394181 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
CLDND1-203ENST00000394181 LCE6AA0A183 80 aa11.69□□□□□ -0.54
CLDND1-203ENST00000394181 A0A0G2JQZ4 141 aa11.68□□□□□ -0.54
CLDND1-203ENST00000394181 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms