RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 KRTAP1-1Q07627 177 aa13.11□□□□□ -0.31
SHANK1-203ENST00000391813 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
SHANK1-203ENST00000391813 PRR15Q8IV56 129 aa13.09□□□□□ -0.31
SHANK1-203ENST00000391813 EPM2AB3EWF7 344 aa13.08□□□□□ -0.32
SHANK1-203ENST00000391813 ATRQ13535 2644 aa13.07□□□□□ -0.32
SHANK1-203ENST00000391813 C16orf90A8MZG2 172 aa13.07□□□□□ -0.32
SHANK1-203ENST00000391813 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
SHANK1-203ENST00000391813 Q8N377 158 aa13.07□□□□□ -0.32
SHANK1-203ENST00000391813 IGLV1-50A0A075B6I6 118 aa13.06□□□□□ -0.32
SHANK1-203ENST00000391813 CSNK1G2-AS1Q8NCQ2 148 aa13.06□□□□□ -0.32
SHANK1-203ENST00000391813 TRANK1O15050 2925 aa13.06□□□□□ -0.32
SHANK1-203ENST00000391813 SPANXA2-OT1Q8N9U9 137 aa13.05□□□□□ -0.32
SHANK1-203ENST00000391813 UQCR11O14957 56 aa13.05□□□□□ -0.32
SHANK1-203ENST00000391813 USP24Q9UPU5 2620 aa13.04□□□□□ -0.32
SHANK1-203ENST00000391813 K7EIL1 84 aa13.04□□□□□ -0.32
SHANK1-203ENST00000391813 RANBP2P49792 3224 aaKnown RBP13.04□□□□□ -0.32
SHANK1-203ENST00000391813 MAST4O15021 2626 aa13.03□□□□□ -0.32
SHANK1-203ENST00000391813 MRPL34Q9BQ48 92 aaKnown RBP13.03□□□□□ -0.32
SHANK1-203ENST00000391813 C19orf73Q9NVV2 129 aa13.03□□□□□ -0.32
SHANK1-203ENST00000391813 LCA10Q71F78 164 aa13.03□□□□□ -0.32
SHANK1-203ENST00000391813 NBDYA0A0U1RRE5 68 aa13.02□□□□□ -0.33
SHANK1-203ENST00000391813 IGFL1Q6UW32 110 aa13.01□□□□□ -0.33
SHANK1-203ENST00000391813 FAM229AH3BQW9 127 aa13□□□□□ -0.33
SHANK1-203ENST00000391813 Q1T7F1 81 aa13□□□□□ -0.33
SHANK1-203ENST00000391813 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
SHANK1-203ENST00000391813 OCR1Q9BZK8 76 aa12.99□□□□□ -0.33
SHANK1-203ENST00000391813 DNAH10OSP0CZ25 163 aa12.97□□□□□ -0.33
SHANK1-203ENST00000391813 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
SHANK1-203ENST00000391813 KRTAP10-3P60369 221 aa12.96□□□□□ -0.33
SHANK1-203ENST00000391813 LINC00313P59037 77 aa12.96□□□□□ -0.33
SHANK1-203ENST00000391813 Q5XG85 94 aa12.96□□□□□ -0.34
SHANK1-203ENST00000391813 KRTAP10-11P60412 298 aa12.96□□□□□ -0.34
SHANK1-203ENST00000391813 CENPEQ02224 2701 aa12.95□□□□□ -0.34
SHANK1-203ENST00000391813 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
SHANK1-203ENST00000391813 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
SHANK1-203ENST00000391813 CDC42SE1Q9NRR8 79 aa12.92□□□□□ -0.34
SHANK1-203ENST00000391813 IGLV5-48A0A075B6I7 105 aa12.92□□□□□ -0.34
SHANK1-203ENST00000391813 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
SHANK1-203ENST00000391813 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
SHANK1-203ENST00000391813 C8orf17Q9NRJ1 99 aa12.92□□□□□ -0.34
SHANK1-203ENST00000391813 FAM168BA1KXE4 195 aa12.91□□□□□ -0.34
SHANK1-203ENST00000391813 C15orf56Q8N910 161 aa12.89□□□□□ -0.35
SHANK1-203ENST00000391813 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
SHANK1-203ENST00000391813 MIR22HGQ0VDD5 57 aa12.89□□□□□ -0.35
SHANK1-203ENST00000391813 IGLV8-61A0A075B6I0 122 aa12.86□□□□□ -0.35
SHANK1-203ENST00000391813 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
SHANK1-203ENST00000391813 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
SHANK1-203ENST00000391813 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
SHANK1-203ENST00000391813 FP248Q71RG6 208 aaPredicted RBP12.81□□□□□ -0.36
SHANK1-203ENST00000391813 CYSTM1Q9H1C7 97 aa12.81□□□□□ -0.36
SHANK1-203ENST00000391813 RTL8CO15255 209 aa12.81□□□□□ -0.36
SHANK1-203ENST00000391813 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
SHANK1-203ENST00000391813 C5orf42Q9H799 3197 aa12.78□□□□□ -0.36
SHANK1-203ENST00000391813 SPINT4Q6UDR6 99 aa12.76□□□□□ -0.37
SHANK1-203ENST00000391813 SPRR4Q96PI1 79 aa12.74□□□□□ -0.37
SHANK1-203ENST00000391813 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.37
SHANK1-203ENST00000391813 UNC79Q9P2D8 2635 aa12.71□□□□□ -0.38
SHANK1-203ENST00000391813 DSCR10P59022 87 aa12.7□□□□□ -0.38
SHANK1-203ENST00000391813 SSBP3-AS1Q7Z2R9 100 aa12.7□□□□□ -0.38
SHANK1-203ENST00000391813 A0A0G2JQZ4 141 aa12.69□□□□□ -0.38
SHANK1-203ENST00000391813 A0A1W2PNN7 141 aa12.69□□□□□ -0.38
SHANK1-203ENST00000391813 Q75L30 129 aa12.69□□□□□ -0.38
SHANK1-203ENST00000391813 BAHCC1Q9P281 2608 aa12.69□□□□□ -0.38
SHANK1-203ENST00000391813 SETXQ7Z333 2677 aaKnown RBP12.68□□□□□ -0.38
SHANK1-203ENST00000391813 IGLV5-37A0A075B6J1 123 aa12.68□□□□□ -0.38
SHANK1-203ENST00000391813 MKI67P46013 3256 aaKnown RBP12.67□□□□□ -0.38
SHANK1-203ENST00000391813 RBM12B-AS1Q9P1G2 102 aa12.67□□□□□ -0.38
SHANK1-203ENST00000391813 IGSF10Q6WRI0 2623 aa12.66□□□□□ -0.38
SHANK1-203ENST00000391813 IGLV7-46A0A075B6I9 117 aa12.66□□□□□ -0.38
SHANK1-203ENST00000391813 A0A0C4DFX4 3053 aa12.65□□□□□ -0.38
SHANK1-203ENST00000391813 BPTFQ12830 3046 aa12.64□□□□□ -0.39
SHANK1-203ENST00000391813 PLA2G1BP04054 148 aaKnown RBP12.64□□□□□ -0.39
SHANK1-203ENST00000391813 FAM229BQ4G0N7 80 aa12.63□□□□□ -0.39
SHANK1-203ENST00000391813 Q96NJ1 140 aa12.63□□□□□ -0.39
SHANK1-203ENST00000391813 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
SHANK1-203ENST00000391813 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
SHANK1-203ENST00000391813 OXTP01178 125 aa12.62□□□□□ -0.39
SHANK1-203ENST00000391813 STAB1Q9NY15 2570 aa12.61□□□□□ -0.39
SHANK1-203ENST00000391813 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
SHANK1-203ENST00000391813 TYMSOSQ8TAI1 123 aa12.6□□□□□ -0.39
SHANK1-203ENST00000391813 ZNF861PO60384 105 aa12.58□□□□□ -0.4
SHANK1-203ENST00000391813 APLNQ9ULZ1 77 aa12.58□□□□□ -0.4
SHANK1-203ENST00000391813 C9orf163Q8N9P6 203 aa12.57□□□□□ -0.4
SHANK1-203ENST00000391813 CR1P17927 2039 aa12.56□□□□□ -0.4
SHANK1-203ENST00000391813 BRCA2P51587 3418 aa12.56□□□□□ -0.4
SHANK1-203ENST00000391813 LINC01558Q9Y6Z2 57 aa12.56□□□□□ -0.4
SHANK1-203ENST00000391813 PRR26Q8N8Z3 221 aa12.55□□□□□ -0.4
SHANK1-203ENST00000391813 COL6A5A8TX70 2615 aa12.55□□□□□ -0.4
SHANK1-203ENST00000391813 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
SHANK1-203ENST00000391813 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
SHANK1-203ENST00000391813 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
SHANK1-203ENST00000391813 A0A087WTM6 91 aa12.53□□□□□ -0.4
SHANK1-203ENST00000391813 CRIPTQ9P021 101 aa12.53□□□□□ -0.4
SHANK1-203ENST00000391813 CNBPP62633 177 aaKnown RBP12.52□□□□□ -0.41
SHANK1-203ENST00000391813 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
SHANK1-203ENST00000391813 Q5VV11 94 aa12.49□□□□□ -0.41
SHANK1-203ENST00000391813 LINC01554Q52M75 96 aa12.48□□□□□ -0.41
SHANK1-203ENST00000391813 TEX15Q9BXT5 2789 aa12.44□□□□□ -0.42
SHANK1-203ENST00000391813 Q8NDZ9 215 aa12.43□□□□□ -0.42
SHANK1-203ENST00000391813 J3QL48 77 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms