RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 C3orf84H3BNL1 204 aa13.69□□□□□ -0.22
GMDS-202ENST00000380815 PRYO14603 147 aa13.69□□□□□ -0.22
GMDS-202ENST00000380815 LINC00528Q8N1L1 170 aa13.69□□□□□ -0.22
GMDS-202ENST00000380815 RPL37AP8A6NKH3 93 aa13.68□□□□□ -0.22
GMDS-202ENST00000380815 C1orf134Q5TEV5 83 aa13.68□□□□□ -0.22
GMDS-202ENST00000380815 SDIM1Q6ZPB5 146 aa13.68□□□□□ -0.22
GMDS-202ENST00000380815 KMT2AQ03164 3969 aa13.67□□□□□ -0.22
GMDS-202ENST00000380815 INAFM2P0DMQ5 153 aa13.66□□□□□ -0.22
GMDS-202ENST00000380815 OBSCN-AS1Q96MR7 158 aa13.66□□□□□ -0.22
GMDS-202ENST00000380815 A0A1W2PNN7 141 aa13.66□□□□□ -0.22
GMDS-202ENST00000380815 SPRR1AP35321 89 aa13.66□□□□□ -0.22
GMDS-202ENST00000380815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.65□□□□□ -0.22
GMDS-202ENST00000380815 Q6ZQY7 126 aa13.65□□□□□ -0.22
GMDS-202ENST00000380815 LINC00474Q9P2X8 69 aa13.65□□□□□ -0.22
GMDS-202ENST00000380815 H3BQ85 93 aa13.64□□□□□ -0.23
GMDS-202ENST00000380815 KRTAP4-16G5E9R7 235 aaPredicted RBP13.63□□□□□ -0.23
GMDS-202ENST00000380815 CHTF8P0CG12 524 aa13.63□□□□□ -0.23
GMDS-202ENST00000380815 GHRHP01286 108 aa13.6□□□□□ -0.23
GMDS-202ENST00000380815 CDIP1Q9H305 208 aa13.6□□□□□ -0.23
GMDS-202ENST00000380815 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
GMDS-202ENST00000380815 Q6ZRX8 168 aa13.6□□□□□ -0.23
GMDS-202ENST00000380815 B5MCH6 92 aa13.59□□□□□ -0.23
GMDS-202ENST00000380815 JMJD7-PLA2G4BH0Y9G9 81 aa13.59□□□□□ -0.23
GMDS-202ENST00000380815 ETDCA0A1B0GVM5 59 aa13.58□□□□□ -0.23
GMDS-202ENST00000380815 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
GMDS-202ENST00000380815 DHRS4-AS1Q9P1J3 65 aa13.57□□□□□ -0.24
GMDS-202ENST00000380815 C14orf132Q9NPU4 83 aa13.56□□□□□ -0.24
GMDS-202ENST00000380815 DNAH2Q9P225 4427 aa13.56□□□□□ -0.24
GMDS-202ENST00000380815 DNAH6Q9C0G6 4158 aa13.56□□□□□ -0.24
GMDS-202ENST00000380815 RTL8CO15255 209 aa13.55□□□□□ -0.24
GMDS-202ENST00000380815 ACYP1P07311 99 aa13.54□□□□□ -0.24
GMDS-202ENST00000380815 SIGMAR1Q99720 223 aa13.54□□□□□ -0.24
GMDS-202ENST00000380815 ALMS1Q8TCU4 4167 aa13.53□□□□□ -0.24
GMDS-202ENST00000380815 PANO1I0J062 215 aa13.53□□□□□ -0.24
GMDS-202ENST00000380815 SPACA4Q8TDM5 124 aa13.53□□□□□ -0.24
GMDS-202ENST00000380815 Q9BRP9 147 aa13.53□□□□□ -0.24
GMDS-202ENST00000380815 PHF5AQ7RTV0 110 aaKnown RBP13.51□□□□□ -0.25
GMDS-202ENST00000380815 LAMTOR3Q9UHA4 124 aa13.51□□□□□ -0.25
GMDS-202ENST00000380815 A0A1B0GV72 72 aa13.5□□□□□ -0.25
GMDS-202ENST00000380815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.5□□□□□ -0.25
GMDS-202ENST00000380815 EPM2AB3EWF7 344 aa13.49□□□□□ -0.25
GMDS-202ENST00000380815 GAGE2AQ6NT46 116 aa13.49□□□□□ -0.25
GMDS-202ENST00000380815 IGLV5-52A0A0A0MRZ9 124 aa13.48□□□□□ -0.25
GMDS-202ENST00000380815 UBE2BP63146 152 aa13.48□□□□□ -0.25
GMDS-202ENST00000380815 RBM3P98179 157 aaKnown RBP13.48□□□□□ -0.25
GMDS-202ENST00000380815 TNP2Q05952 138 aa13.48□□□□□ -0.25
GMDS-202ENST00000380815 DPH3Q96FX2 82 aa13.48□□□□□ -0.25
GMDS-202ENST00000380815 FUSP35637 526 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■□□ 16.4
GMDS-202ENST00000380815 HECTD4Q9Y4D8 3996 aa13.46□□□□□ -0.25
GMDS-202ENST00000380815 XGP55808 180 aa13.46□□□□□ -0.25
GMDS-202ENST00000380815 CCKP06307 115 aa13.45□□□□□ -0.26
GMDS-202ENST00000380815 KRTAP11-1Q8IUC1 163 aa13.45□□□□□ -0.26
GMDS-202ENST00000380815 NDUFV3P56181 108 aaKnown RBP13.44□□□□□ -0.26
GMDS-202ENST00000380815 FAM19A1Q7Z5A9 133 aa13.43□□□□□ -0.26
GMDS-202ENST00000380815 LOC110117498A0A087WWA1 95 aa13.43□□□□□ -0.26
GMDS-202ENST00000380815 DNAH17Q9UFH2 4485 aa13.42□□□□□ -0.26
GMDS-202ENST00000380815 LINC01547P58512 204 aaPredicted RBP13.42□□□□□ -0.26
GMDS-202ENST00000380815 Q8N377 158 aa13.42□□□□□ -0.26
GMDS-202ENST00000380815 SMCR5Q8TEV8 140 aa13.42□□□□□ -0.26
GMDS-202ENST00000380815 IGLV5-48A0A075B6I7 105 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 ERC2-IT1O76042 136 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 MT-ATP8P03928 68 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 DSCR8Q96T75 97 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 H0Y9J4 135 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 PDE6GP18545 87 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 DEFB105AQ8NG35 78 aa13.4□□□□□ -0.26
GMDS-202ENST00000380815 PRLHP81277 87 aa13.39□□□□□ -0.27
GMDS-202ENST00000380815 Q6ZQT0 140 aa13.39□□□□□ -0.27
GMDS-202ENST00000380815 ST20-AS1Q8NBB2 130 aa13.37□□□□□ -0.27
GMDS-202ENST00000380815 PLAC8Q9NZF1 115 aa13.37□□□□□ -0.27
GMDS-202ENST00000380815 TRBV7-4A0A0J9YYF1 115 aa13.36□□□□□ -0.27
GMDS-202ENST00000380815 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
GMDS-202ENST00000380815 FRAS1Q86XX4 4008 aa13.34□□□□□ -0.27
GMDS-202ENST00000380815 BCE1O60756 84 aa13.33□□□□□ -0.28
GMDS-202ENST00000380815 LINC00846Q9NV44 126 aa13.33□□□□□ -0.28
GMDS-202ENST00000380815 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
GMDS-202ENST00000380815 HIGD2AQ9BW72 106 aa13.32□□□□□ -0.28
GMDS-202ENST00000380815 C21orf62-AS1Q17RA5 79 aa13.31□□□□□ -0.28
GMDS-202ENST00000380815 SCGB1A1P11684 91 aa13.3□□□□□ -0.28
GMDS-202ENST00000380815 PCP4P48539 62 aa13.3□□□□□ -0.28
GMDS-202ENST00000380815 UBE2AP49459 152 aa13.3□□□□□ -0.28
GMDS-202ENST00000380815 HYDINQ4G0P3 5121 aa13.28□□□□□ -0.28
GMDS-202ENST00000380815 KRTAP13-1Q8IUC0 172 aa13.28□□□□□ -0.28
GMDS-202ENST00000380815 C3orf22Q8N5N4 141 aa13.28□□□□□ -0.28
GMDS-202ENST00000380815 LCE6AA0A183 80 aa13.26□□□□□ -0.29
GMDS-202ENST00000380815 SMIM29Q86T20 159 aa13.25□□□□□ -0.29
GMDS-202ENST00000380815 DNAH11Q96DT5 4516 aa13.22□□□□□ -0.29
GMDS-202ENST00000380815 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
GMDS-202ENST00000380815 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
GMDS-202ENST00000380815 Q6Q795 121 aa13.21□□□□□ -0.29
GMDS-202ENST00000380815 FAT2Q9NYQ8 4349 aa13.21□□□□□ -0.3
GMDS-202ENST00000380815 SPRR1BP22528 89 aa13.2□□□□□ -0.3
GMDS-202ENST00000380815 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
GMDS-202ENST00000380815 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
GMDS-202ENST00000380815 Q6ZSA8 131 aa13.19□□□□□ -0.3
GMDS-202ENST00000380815 F8WEM9 126 aa13.18□□□□□ -0.3
GMDS-202ENST00000380815 Q6JHZ5 121 aa13.18□□□□□ -0.3
GMDS-202ENST00000380815 IMUPQ9GZP8 106 aa13.18□□□□□ -0.3
GMDS-202ENST00000380815 DNAH5Q8TE73 4624 aa13.18□□□□□ -0.3
GMDS-202ENST00000380815 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms