RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
VRK3-202ENST00000377011 C14orf132Q9NPU4 83 aa8.2□□□□□ -1.1
VRK3-202ENST00000377011 CCKP06307 115 aa8.19□□□□□ -1.1
VRK3-202ENST00000377011 Q8N814 137 aa8.19□□□□□ -1.1
VRK3-202ENST00000377011 KRTAP17-1Q9BYP8 105 aa8.19□□□□□ -1.1
VRK3-202ENST00000377011 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
VRK3-202ENST00000377011 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
VRK3-202ENST00000377011 PCLOQ9Y6V0 5065 aa8.18□□□□□ -1.1
VRK3-202ENST00000377011 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
VRK3-202ENST00000377011 H3BQ85 93 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 LCE2BO14633 110 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 CRYGAP11844 174 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 ATP5EP2Q5VTU8 51 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 DNAH8Q96JB1 4490 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 FAT1Q14517 4588 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
VRK3-202ENST00000377011 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
VRK3-202ENST00000377011 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
VRK3-202ENST00000377011 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
VRK3-202ENST00000377011 NCR3O14931 201 aa8.15□□□□□ -1.1
VRK3-202ENST00000377011 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.11
VRK3-202ENST00000377011 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
VRK3-202ENST00000377011 SLPIP03973 132 aa8.13□□□□□ -1.11
VRK3-202ENST00000377011 LINC01556Q5JQF7 62 aa8.13□□□□□ -1.11
VRK3-202ENST00000377011 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
VRK3-202ENST00000377011 IGLV6-57P01721 117 aa8.12□□□□□ -1.11
VRK3-202ENST00000377011 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
VRK3-202ENST00000377011 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
VRK3-202ENST00000377011 PRR3P79522 188 aaKnown RBP8.12□□□□□ -1.11
VRK3-202ENST00000377011 IGKV3D-7A0A0C4DH55 119 aa8.11□□□□□ -1.11
VRK3-202ENST00000377011 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
VRK3-202ENST00000377011 UNQ6190/PRO20217Q6UXQ8 127 aa8.11□□□□□ -1.11
VRK3-202ENST00000377011 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
VRK3-202ENST00000377011 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
VRK3-202ENST00000377011 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
VRK3-202ENST00000377011 hADV29S1A0JD25 119 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 GHRHP01286 108 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
VRK3-202ENST00000377011 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 A0A087WTM6 91 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 LOC110117498A0A087WWA1 95 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 F8WDY8 70 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 PDE6GP18545 87 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 Q8NDZ9 215 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 UBL5Q9BZL1 73 aa8.09□□□□□ -1.11
VRK3-202ENST00000377011 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
VRK3-202ENST00000377011 C16orf90A8MZG2 172 aa8.08□□□□□ -1.12
VRK3-202ENST00000377011 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
VRK3-202ENST00000377011 BCE1O60756 84 aa8.08□□□□□ -1.12
VRK3-202ENST00000377011 TMEM258P61165 79 aa8.06□□□□□ -1.12
VRK3-202ENST00000377011 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
VRK3-202ENST00000377011 J3KT08 172 aa8.06□□□□□ -1.12
VRK3-202ENST00000377011 RBM3P98179 157 aaKnown RBP8.06□□□□□ -1.12
VRK3-202ENST00000377011 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
VRK3-202ENST00000377011 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
VRK3-202ENST00000377011 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
VRK3-202ENST00000377011 Q6ZQT0 140 aa8.04□□□□□ -1.12
VRK3-202ENST00000377011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.03□□□□□ -1.12
VRK3-202ENST00000377011 A0A087WVE0 104 aa8.03□□□□□ -1.12
VRK3-202ENST00000377011 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
VRK3-202ENST00000377011 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
VRK3-202ENST00000377011 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
VRK3-202ENST00000377011 COX7BP24311 80 aa8.01□□□□□ -1.13
VRK3-202ENST00000377011 ELOF1P60002 83 aaKnown RBP8.01□□□□□ -1.13
VRK3-202ENST00000377011 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
VRK3-202ENST00000377011 M0R378 163 aa8□□□□□ -1.13
VRK3-202ENST00000377011 PSCAO43653 123 aa8□□□□□ -1.13
VRK3-202ENST00000377011 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
VRK3-202ENST00000377011 VPREB1P12018 145 aa8□□□□□ -1.13
VRK3-202ENST00000377011 HAMPP81172 84 aa8□□□□□ -1.13
VRK3-202ENST00000377011 DSCR8Q96T75 97 aa8□□□□□ -1.13
VRK3-202ENST00000377011 LAMTOR3Q9UHA4 124 aa8□□□□□ -1.13
VRK3-202ENST00000377011 Q6ZQY7 126 aa8□□□□□ -1.13
VRK3-202ENST00000377011 IGKV2D-24A0A075B6R9 120 aa7.99□□□□□ -1.13
VRK3-202ENST00000377011 CXCL6P80162 114 aa7.98□□□□□ -1.13
VRK3-202ENST00000377011 C15orf56Q8N910 161 aa7.98□□□□□ -1.13
VRK3-202ENST00000377011 XAGE1AQ9HD64 81 aa7.98□□□□□ -1.13
VRK3-202ENST00000377011 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
VRK3-202ENST00000377011 C1orf43Q9BWL3 253 aa7.97□□□□□ -1.13
VRK3-202ENST00000377011 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
VRK3-202ENST00000377011 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
VRK3-202ENST00000377011 DPH3Q96FX2 82 aa7.96□□□□□ -1.14
VRK3-202ENST00000377011 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
VRK3-202ENST00000377011 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
VRK3-202ENST00000377011 LOC107984640A0A0U1RRK4 108 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 CDK2AP2O75956 126 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 Q6ZRU5 148 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
VRK3-202ENST00000377011 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
VRK3-202ENST00000377011 Q6ZVQ6 151 aa7.94□□□□□ -1.14
VRK3-202ENST00000377011 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
VRK3-202ENST00000377011 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
VRK3-202ENST00000377011 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
VRK3-202ENST00000377011 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms