RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 Q6ZQT0 140 aa13.11□□□□□ -0.31
VSX1-202ENST00000376709 LOC110117498A0A087WWA1 95 aa13.1□□□□□ -0.31
VSX1-202ENST00000376709 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
VSX1-202ENST00000376709 KRTAP1-5Q9BYS1 174 aa13.09□□□□□ -0.31
VSX1-202ENST00000376709 TENM2Q9NT68 2774 aa13.08□□□□□ -0.32
VSX1-202ENST00000376709 PRKDCP78527 4128 aaKnown RBP13.08□□□□□ -0.32
VSX1-202ENST00000376709 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
VSX1-202ENST00000376709 MEGF8Q7Z7M0 2845 aa13.08□□□□□ -0.32
VSX1-202ENST00000376709 LOC107984640A0A0U1RRK4 108 aa13.07□□□□□ -0.32
VSX1-202ENST00000376709 RPL37AP8A6NKH3 93 aa13.07□□□□□ -0.32
VSX1-202ENST00000376709 PSCAO43653 123 aa13.06□□□□□ -0.32
VSX1-202ENST00000376709 PDE6GP18545 87 aa13.05□□□□□ -0.32
VSX1-202ENST00000376709 UBL5Q9BZL1 73 aa13.05□□□□□ -0.32
VSX1-202ENST00000376709 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
VSX1-202ENST00000376709 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
VSX1-202ENST00000376709 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
VSX1-202ENST00000376709 PLECQ15149 4684 aaKnown RBP13.04□□□□□ -0.32
VSX1-202ENST00000376709 A0A087WVE0 104 aa13.04□□□□□ -0.32
VSX1-202ENST00000376709 M0R2N4 97 aa13.04□□□□□ -0.32
VSX1-202ENST00000376709 HIST1H4AP62805 103 aaKnown RBP13.03□□□□□ -0.32
VSX1-202ENST00000376709 FAM19A5Q7Z5A7 132 aaPredicted RBP13.03□□□□□ -0.32
VSX1-202ENST00000376709 IGLV1-50A0A075B6I6 118 aa13.03□□□□□ -0.32
VSX1-202ENST00000376709 PRYO14603 147 aa13.01□□□□□ -0.33
VSX1-202ENST00000376709 KRTAP7-1Q8IUC3 87 aa13.01□□□□□ -0.33
VSX1-202ENST00000376709 ATP5EP2Q5VTU8 51 aa13□□□□□ -0.33
VSX1-202ENST00000376709 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
VSX1-202ENST00000376709 TRBV7-4A0A0J9YYF1 115 aa13□□□□□ -0.33
VSX1-202ENST00000376709 SS18L2Q9UHA2 77 aa13□□□□□ -0.33
VSX1-202ENST00000376709 Q6ZRX8 168 aa12.99□□□□□ -0.33
VSX1-202ENST00000376709 ETDCA0A1B0GVM5 59 aa12.98□□□□□ -0.33
VSX1-202ENST00000376709 DHRS4-AS1Q9P1J3 65 aa12.97□□□□□ -0.33
VSX1-202ENST00000376709 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
VSX1-202ENST00000376709 KRTAP4-16G5E9R7 235 aaPredicted RBP12.96□□□□□ -0.33
VSX1-202ENST00000376709 CNBPP62633 177 aaKnown RBP12.96□□□□□ -0.34
VSX1-202ENST00000376709 ATOX1O00244 68 aa12.95□□□□□ -0.34
VSX1-202ENST00000376709 SPRR1AP35321 89 aa12.95□□□□□ -0.34
VSX1-202ENST00000376709 STARD9Q9P2P6 4700 aa12.95□□□□□ -0.34
VSX1-202ENST00000376709 NUPR2A6NF83 97 aa12.94□□□□□ -0.34
VSX1-202ENST00000376709 Q9BRP9 147 aa12.94□□□□□ -0.34
VSX1-202ENST00000376709 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.93□□□□□ -0.34
VSX1-202ENST00000376709 A0A096LNI7 61 aa12.93□□□□□ -0.34
VSX1-202ENST00000376709 IGKV2-24A0A0C4DH68 120 aa12.93□□□□□ -0.34
VSX1-202ENST00000376709 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
VSX1-202ENST00000376709 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
VSX1-202ENST00000376709 Q6ZVQ6 151 aa12.92□□□□□ -0.34
VSX1-202ENST00000376709 C3orf22Q8N5N4 141 aa12.92□□□□□ -0.34
VSX1-202ENST00000376709 FAM19A1Q7Z5A9 133 aa12.91□□□□□ -0.34
VSX1-202ENST00000376709 UQCRQO14949 82 aa12.91□□□□□ -0.34
VSX1-202ENST00000376709 Q8N377 158 aa12.91□□□□□ -0.34
VSX1-202ENST00000376709 HAMPP81172 84 aa12.9□□□□□ -0.34
VSX1-202ENST00000376709 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
VSX1-202ENST00000376709 COX7CP15954 63 aa12.88□□□□□ -0.35
VSX1-202ENST00000376709 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
VSX1-202ENST00000376709 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
VSX1-202ENST00000376709 NBDYA0A0U1RRE5 68 aa12.87□□□□□ -0.35
VSX1-202ENST00000376709 UBE2BP63146 152 aa12.87□□□□□ -0.35
VSX1-202ENST00000376709 ST20-AS1Q8NBB2 130 aa12.85□□□□□ -0.35
VSX1-202ENST00000376709 VPS13DQ5THJ4 4388 aa12.85□□□□□ -0.35
VSX1-202ENST00000376709 A0A1W2PNN7 141 aa12.84□□□□□ -0.35
VSX1-202ENST00000376709 IGLV5-48A0A075B6I7 105 aa12.82□□□□□ -0.36
VSX1-202ENST00000376709 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
VSX1-202ENST00000376709 CXCL6P80162 114 aa12.81□□□□□ -0.36
VSX1-202ENST00000376709 SERP2Q8N6R1 65 aa12.8□□□□□ -0.36
VSX1-202ENST00000376709 LRCOL1A6NCL2 159 aa12.8□□□□□ -0.36
VSX1-202ENST00000376709 CHTF8P0CG12 524 aa12.8□□□□□ -0.36
VSX1-202ENST00000376709 SCXQ7RTU7 201 aa12.77□□□□□ -0.36
VSX1-202ENST00000376709 C9orf163Q8N9P6 203 aa12.77□□□□□ -0.36
VSX1-202ENST00000376709 PRLHP81277 87 aa12.76□□□□□ -0.37
VSX1-202ENST00000376709 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
VSX1-202ENST00000376709 CRYGAP11844 174 aa12.76□□□□□ -0.37
VSX1-202ENST00000376709 Q6ZRN7 208 aaPredicted RBP12.76□□□□□ -0.37
VSX1-202ENST00000376709 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
VSX1-202ENST00000376709 FBN3Q75N90 2809 aa12.75□□□□□ -0.37
VSX1-202ENST00000376709 FUSP35637 526 aaKnown RBP eCLIP12.74□□□□□ -0.37
VSX1-202ENST00000376709 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
VSX1-202ENST00000376709 TNP2Q05952 138 aa12.74□□□□□ -0.37
VSX1-202ENST00000376709 CYSTM1Q9H1C7 97 aa12.74□□□□□ -0.37
VSX1-202ENST00000376709 NREPQ16612 68 aa12.73□□□□□ -0.37
VSX1-202ENST00000376709 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
VSX1-202ENST00000376709 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
VSX1-202ENST00000376709 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
VSX1-202ENST00000376709 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
VSX1-202ENST00000376709 F8WEM9 126 aa12.68□□□□□ -0.38
VSX1-202ENST00000376709 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
VSX1-202ENST00000376709 A0A1B0GW54 56 aa12.67□□□□□ -0.38
VSX1-202ENST00000376709 KRTAP11-1Q8IUC1 163 aa12.67□□□□□ -0.38
VSX1-202ENST00000376709 SMIM29Q86T20 159 aa12.66□□□□□ -0.38
VSX1-202ENST00000376709 Q8NBF4 154 aa12.66□□□□□ -0.38
VSX1-202ENST00000376709 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
VSX1-202ENST00000376709 TGP01266 2768 aa12.65□□□□□ -0.39
VSX1-202ENST00000376709 SVIPQ8NHG7 77 aa12.64□□□□□ -0.39
VSX1-202ENST00000376709 BPY2O14599 106 aa12.64□□□□□ -0.39
VSX1-202ENST00000376709 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
VSX1-202ENST00000376709 Q8N9L7 120 aa12.63□□□□□ -0.39
VSX1-202ENST00000376709 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
VSX1-202ENST00000376709 PANO1I0J062 215 aa12.63□□□□□ -0.39
VSX1-202ENST00000376709 LINC00476Q8WZB0 136 aa12.63□□□□□ -0.39
VSX1-202ENST00000376709 SMIM20Q8N5G0 67 aa12.62□□□□□ -0.39
VSX1-202ENST00000376709 HECTD4Q9Y4D8 3996 aa12.61□□□□□ -0.39
VSX1-202ENST00000376709 A0A087WTM6 91 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms