RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CCDC179H3BU77 68 aa12.02□□□□□ -0.48
PTPDC1-202ENST00000375360 FAM30AQ9NZY2 134 aa12.02□□□□□ -0.49
PTPDC1-202ENST00000375360 WDFY3Q8IZQ1 3526 aa12.01□□□□□ -0.49
PTPDC1-202ENST00000375360 FAM168BA1KXE4 195 aa12.01□□□□□ -0.49
PTPDC1-202ENST00000375360 Q6ZVQ6 151 aa12.01□□□□□ -0.49
PTPDC1-202ENST00000375360 GVQW2A0A096LPI5 108 aaPredicted RBP12□□□□□ -0.49
PTPDC1-202ENST00000375360 Q8N9L7 120 aa12□□□□□ -0.49
PTPDC1-202ENST00000375360 PRR34Q9NV39 138 aa12□□□□□ -0.49
PTPDC1-202ENST00000375360 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
PTPDC1-202ENST00000375360 CDIP1Q9H305 208 aa11.98□□□□□ -0.49
PTPDC1-202ENST00000375360 STAB2Q8WWQ8 2551 aa11.97□□□□□ -0.49
PTPDC1-202ENST00000375360 RELNP78509 3460 aa11.96□□□□□ -0.5
PTPDC1-202ENST00000375360 LINC01547P58512 204 aaPredicted RBP11.96□□□□□ -0.5
PTPDC1-202ENST00000375360 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.5
PTPDC1-202ENST00000375360 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.5
PTPDC1-202ENST00000375360 NIPBLQ6KC79 2804 aaeCLIP11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 VPREB1P12018 145 aa11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 COX7CP15954 63 aa11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 IGHV6-1A0A0B4J1U7 121 aa11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 J3KT08 172 aa11.95□□□□□ -0.5
PTPDC1-202ENST00000375360 RTL8CO15255 209 aa11.94□□□□□ -0.5
PTPDC1-202ENST00000375360 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
PTPDC1-202ENST00000375360 SERTAD4-AS1Q5TG53 156 aa11.94□□□□□ -0.5
PTPDC1-202ENST00000375360 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
PTPDC1-202ENST00000375360 KMT2BQ9UMN6 2715 aaPredicted RBP11.94□□□□□ -0.5
PTPDC1-202ENST00000375360 C16orf90A8MZG2 172 aa11.93□□□□□ -0.5
PTPDC1-202ENST00000375360 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
PTPDC1-202ENST00000375360 FBN2P35556 2912 aa11.91□□□□□ -0.5
PTPDC1-202ENST00000375360 FAM236DA0A1B0GTK5 79 aa11.91□□□□□ -0.5
PTPDC1-202ENST00000375360 FAM236CP0DP71 79 aa11.91□□□□□ -0.5
PTPDC1-202ENST00000375360 Q6Q795 121 aa11.91□□□□□ -0.5
PTPDC1-202ENST00000375360 Q6ZRX8 168 aa11.91□□□□□ -0.5
PTPDC1-202ENST00000375360 LAMA5O15230 3695 aa11.9□□□□□ -0.5
PTPDC1-202ENST00000375360 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
PTPDC1-202ENST00000375360 ASPMQ8IZT6 3477 aa11.9□□□□□ -0.5
PTPDC1-202ENST00000375360 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
PTPDC1-202ENST00000375360 CASC2Q6XLA1 102 aa11.88□□□□□ -0.51
PTPDC1-202ENST00000375360 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
PTPDC1-202ENST00000375360 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
PTPDC1-202ENST00000375360 MOBPQ13875 183 aa11.87□□□□□ -0.51
PTPDC1-202ENST00000375360 TENM4Q6N022 2769 aa11.87□□□□□ -0.51
PTPDC1-202ENST00000375360 IGLV6-57P01721 117 aa11.87□□□□□ -0.51
PTPDC1-202ENST00000375360 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
PTPDC1-202ENST00000375360 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
PTPDC1-202ENST00000375360 TRAV7A0A075B6U4 112 aa11.83□□□□□ -0.52
PTPDC1-202ENST00000375360 TRBV7-6A0A0J9YX20 115 aa11.81□□□□□ -0.52
PTPDC1-202ENST00000375360 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
PTPDC1-202ENST00000375360 C9orf129Q5T035 196 aaKnown RBP11.8□□□□□ -0.52
PTPDC1-202ENST00000375360 Q6ZQT0 140 aa11.78□□□□□ -0.52
PTPDC1-202ENST00000375360 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
PTPDC1-202ENST00000375360 SPACA4Q8TDM5 124 aa11.77□□□□□ -0.53
PTPDC1-202ENST00000375360 DMDP11532 3685 aa11.77□□□□□ -0.53
PTPDC1-202ENST00000375360 IGLV1-50A0A075B6I6 118 aa11.76□□□□□ -0.53
PTPDC1-202ENST00000375360 Q8NBF4 154 aa11.75□□□□□ -0.53
PTPDC1-202ENST00000375360 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
PTPDC1-202ENST00000375360 NDUFC1O43677 76 aa11.75□□□□□ -0.53
PTPDC1-202ENST00000375360 PCOTHQ58A44 107 aa11.74□□□□□ -0.53
PTPDC1-202ENST00000375360 LINC00528Q8N1L1 170 aa11.74□□□□□ -0.53
PTPDC1-202ENST00000375360 KCNQ1DNQ9H478 68 aa11.74□□□□□ -0.53
PTPDC1-202ENST00000375360 TRBV7-7A0A0K0K1E9 115 aa11.73□□□□□ -0.53
PTPDC1-202ENST00000375360 WIPF1O43516 503 aa11.73□□□□□ -0.53
PTPDC1-202ENST00000375360 BCE1O60756 84 aa11.72□□□□□ -0.53
PTPDC1-202ENST00000375360 A0A087WTM6 91 aa11.72□□□□□ -0.53
PTPDC1-202ENST00000375360 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
PTPDC1-202ENST00000375360 C9orf163Q8N9P6 203 aa11.72□□□□□ -0.53
PTPDC1-202ENST00000375360 CXCL6P80162 114 aa11.71□□□□□ -0.53
PTPDC1-202ENST00000375360 A0A0G2JQZ4 141 aa11.71□□□□□ -0.54
PTPDC1-202ENST00000375360 A0A1W2PNN7 141 aa11.71□□□□□ -0.54
PTPDC1-202ENST00000375360 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
PTPDC1-202ENST00000375360 TMEM254Q8TBM7 123 aa11.68□□□□□ -0.54
PTPDC1-202ENST00000375360 RPL37AP61513 92 aaKnown RBP11.67□□□□□ -0.54
PTPDC1-202ENST00000375360 BRK1Q8WUW1 75 aa11.67□□□□□ -0.54
PTPDC1-202ENST00000375360 LOC110117498A0A087WWA1 95 aa11.66□□□□□ -0.54
PTPDC1-202ENST00000375360 SEC61GP60059 68 aa11.66□□□□□ -0.54
PTPDC1-202ENST00000375360 H0Y9P7 68 aa11.65□□□□□ -0.54
PTPDC1-202ENST00000375360 CRYGAP11844 174 aa11.65□□□□□ -0.54
PTPDC1-202ENST00000375360 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
PTPDC1-202ENST00000375360 Q8N377 158 aa11.63□□□□□ -0.55
PTPDC1-202ENST00000375360 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
PTPDC1-202ENST00000375360 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
PTPDC1-202ENST00000375360 ERC2-IT1O76042 136 aa11.61□□□□□ -0.55
PTPDC1-202ENST00000375360 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
PTPDC1-202ENST00000375360 TLX1NBP0CAT3 122 aa11.6□□□□□ -0.55
PTPDC1-202ENST00000375360 ZFHX4Q86UP3 3567 aa11.6□□□□□ -0.55
PTPDC1-202ENST00000375360 TYMSOSQ8TAI1 123 aa11.59□□□□□ -0.55
PTPDC1-202ENST00000375360 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
PTPDC1-202ENST00000375360 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
PTPDC1-202ENST00000375360 hDV103S1A0JD37 113 aa11.57□□□□□ -0.56
PTPDC1-202ENST00000375360 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
PTPDC1-202ENST00000375360 IGKV2D-30A0A075B6S6 120 aa11.56□□□□□ -0.56
PTPDC1-202ENST00000375360 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
PTPDC1-202ENST00000375360 ATP5EP56381 51 aaPredicted RBP11.56□□□□□ -0.56
PTPDC1-202ENST00000375360 C1orf64Q8NEQ6 169 aa11.55□□□□□ -0.56
PTPDC1-202ENST00000375360 IGFL1Q6UW32 110 aa11.54□□□□□ -0.56
PTPDC1-202ENST00000375360 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
PTPDC1-202ENST00000375360 SPINK1P00995 79 aa11.53□□□□□ -0.56
PTPDC1-202ENST00000375360 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
PTPDC1-202ENST00000375360 TNP2Q05952 138 aa11.53□□□□□ -0.56
PTPDC1-202ENST00000375360 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms