RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 Q6ZRX8 168 aa3.53□□□□□ -1.84
SMNDC1-202ENST00000369603 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
SMNDC1-202ENST00000369603 TACC2O95359 2948 aa3.53□□□□□ -1.84
SMNDC1-202ENST00000369603 ITPR1Q14643 2758 aa3.53□□□□□ -1.85
SMNDC1-202ENST00000369603 CXCL6P80162 114 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 Q9BRP9 147 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 KCNQ1DNQ9H478 68 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 HRNRQ86YZ3 2850 aaPredicted RBP3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 SEC61GP60059 68 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 C1orf195Q5TG92 126 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 PLA2G2DQ9UNK4 145 aa3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 TEP1Q99973 2627 aaKnown RBP3.52□□□□□ -1.85
SMNDC1-202ENST00000369603 PRLHP81277 87 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 PRR4Q16378 134 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 Q6ZQT0 140 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 GCN1Q92616 2671 aaKnown RBP3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 APCP25054 2843 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 Q8N9L7 120 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 FAM30AQ9NZY2 134 aa3.51□□□□□ -1.85
SMNDC1-202ENST00000369603 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 IGLV9-49A0A0B4J1Y8 123 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 LRCOL1A6NCL2 159 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 ZZEF1O43149 2961 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 LINC00528Q8N1L1 170 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 ITPR2Q14571 2701 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 BCE1O60756 84 aa3.5□□□□□ -1.85
SMNDC1-202ENST00000369603 COL6A5A8TX70 2615 aa3.49□□□□□ -1.85
SMNDC1-202ENST00000369603 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
SMNDC1-202ENST00000369603 APLNQ9ULZ1 77 aa3.49□□□□□ -1.85
SMNDC1-202ENST00000369603 WWC2-AS2Q96NR7 200 aa3.49□□□□□ -1.85
SMNDC1-202ENST00000369603 A0A087WSZ3 146 aa3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 RTL8CO15255 209 aa3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 CNBPP62633 177 aaKnown RBP3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 Q8NBF4 154 aa3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 PHF5AQ7RTV0 110 aaKnown RBP3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 WFDC13Q8IUB5 93 aa3.48□□□□□ -1.85
SMNDC1-202ENST00000369603 C9orf163Q8N9P6 203 aa3.47□□□□□ -1.85
SMNDC1-202ENST00000369603 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
SMNDC1-202ENST00000369603 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
SMNDC1-202ENST00000369603 IGLV5-37A0A075B6J1 123 aa3.47□□□□□ -1.85
SMNDC1-202ENST00000369603 CFAP47Q6ZTR5 3102 aa3.47□□□□□ -1.85
SMNDC1-202ENST00000369603 EPM2AB3EWF7 344 aa3.46□□□□□ -1.85
SMNDC1-202ENST00000369603 CYSTM1Q9H1C7 97 aa3.46□□□□□ -1.85
SMNDC1-202ENST00000369603 STAB1Q9NY15 2570 aa3.46□□□□□ -1.85
SMNDC1-202ENST00000369603 BAHCC1Q9P281 2608 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 H7BZZ5 65 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 ZANQ9Y493 2812 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 KMT2BQ9UMN6 2715 aaPredicted RBP3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 OBSCN-AS1Q96MR7 158 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 MUC3AQ02505 3323 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 LINC00336Q6ZUF6 198 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 LINC00476Q8WZB0 136 aa3.46□□□□□ -1.86
SMNDC1-202ENST00000369603 TRBV7-4A0A0J9YYF1 115 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 PSPHP1O15172 72 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 SPINK6Q6UWN8 80 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 NOTCH1P46531 2555 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 CASC10Q5T4H9 136 aa3.45□□□□□ -1.86
SMNDC1-202ENST00000369603 HCG22E2RYF7 251 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 A0A087WTM6 91 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 CASC2Q6XLA1 102 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 SMIM29Q86T20 159 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 HIVEP1P15822 2718 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
SMNDC1-202ENST00000369603 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
SMNDC1-202ENST00000369603 CHKB-CPT1BH3BT56 60 aa3.43□□□□□ -1.86
SMNDC1-202ENST00000369603 Q8N377 158 aa3.43□□□□□ -1.86
SMNDC1-202ENST00000369603 NBEAL2Q6ZNJ1 2754 aa3.43□□□□□ -1.86
SMNDC1-202ENST00000369603 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
SMNDC1-202ENST00000369603 A6NED7 52 aa3.42□□□□□ -1.86
SMNDC1-202ENST00000369603 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
SMNDC1-202ENST00000369603 LIMD2Q9BT23 127 aa3.42□□□□□ -1.86
SMNDC1-202ENST00000369603 MOBPQ13875 183 aa3.41□□□□□ -1.86
SMNDC1-202ENST00000369603 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
SMNDC1-202ENST00000369603 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
SMNDC1-202ENST00000369603 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
SMNDC1-202ENST00000369603 Q5XG85 94 aa3.41□□□□□ -1.86
SMNDC1-202ENST00000369603 IGLV5-48A0A075B6I7 105 aa3.4□□□□□ -1.86
SMNDC1-202ENST00000369603 ERC2-IT1O76042 136 aa3.4□□□□□ -1.86
SMNDC1-202ENST00000369603 OXTP01178 125 aa3.4□□□□□ -1.86
SMNDC1-202ENST00000369603 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.86
SMNDC1-202ENST00000369603 PRR15LQ9BU68 103 aa3.4□□□□□ -1.86
SMNDC1-202ENST00000369603 ZNF861PO60384 105 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 IGFL1Q6UW32 110 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 CELSR2Q9HCU4 2923 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 DMDP11532 3685 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 Q8NDZ9 215 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 TP53AIP1Q9HCN2 124 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 CRYBG3Q68DQ2 2970 aa3.39□□□□□ -1.87
SMNDC1-202ENST00000369603 H0Y9P7 68 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms