RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
RNU6-1339P-201ENST00000363574 LRP2P98164 4655 aa-0.2□□□□□ -2.44
RNU6-1339P-201ENST00000363574 WFDC9Q8NEX5 89 aa-0.2□□□□□ -2.44
RNU6-1339P-201ENST00000363574 POLR1AO95602 1720 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-1339P-201ENST00000363574 NSD1Q96L73 2696 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-1339P-201ENST00000363574 KANTRA0A1W2PQU2 76 aa-0.21□□□□□ -2.44
RNU6-1339P-201ENST00000363574 DCHS2Q6V1P9 2916 aa-0.22□□□□□ -2.44
RNU6-1339P-201ENST00000363574 ZNF831Q5JPB2 1677 aa-0.22□□□□□ -2.44
RNU6-1339P-201ENST00000363574 RGPD8O14715 1765 aaPredicted RBP-0.22□□□□□ -2.45
RNU6-1339P-201ENST00000363574 RGPD5Q99666 1765 aa-0.22□□□□□ -2.45
RNU6-1339P-201ENST00000363574 LTN1O94822 1766 aa-0.23□□□□□ -2.45
RNU6-1339P-201ENST00000363574 DEFB135Q30KP9 77 aa-0.23□□□□□ -2.45
RNU6-1339P-201ENST00000363574 COX6B2Q6YFQ2 88 aa-0.23□□□□□ -2.45
RNU6-1339P-201ENST00000363574 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1339P-201ENST00000363574 APC2O95996 2303 aa-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 PRKDCP78527 4128 aaKnown RBP-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 NDUFB1O75438 58 aa-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 NCOA2Q15596 1464 aa-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 URB2Q14146 1524 aaKnown RBP-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 SETXQ7Z333 2677 aaKnown RBP-0.24□□□□□ -2.45
RNU6-1339P-201ENST00000363574 NDUFA3O95167 84 aa-0.25□□□□□ -2.45
RNU6-1339P-201ENST00000363574 ST20Q9HBF5 79 aa-0.25□□□□□ -2.45
RNU6-1339P-201ENST00000363574 FLNAP21333 2647 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1339P-201ENST00000363574 TIAM2Q8IVF5 1701 aa-0.26□□□□□ -2.45
RNU6-1339P-201ENST00000363574 HECTD4Q9Y4D8 3996 aa-0.26□□□□□ -2.45
RNU6-1339P-201ENST00000363574 DOT1LQ8TEK3 1739 aa-0.27□□□□□ -2.45
RNU6-1339P-201ENST00000363574 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1339P-201ENST00000363574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.28□□□□□ -2.45
RNU6-1339P-201ENST00000363574 ADIRFQ15847 76 aa-0.28□□□□□ -2.45
RNU6-1339P-201ENST00000363574 S100A13Q99584 98 aa-0.28□□□□□ -2.45
RNU6-1339P-201ENST00000363574 DIP2BQ9P265 1576 aa-0.28□□□□□ -2.45
RNU6-1339P-201ENST00000363574 CCDC18Q5T9S5 1454 aa-0.29□□□□□ -2.46
RNU6-1339P-201ENST00000363574 PIK3C2BO00750 1634 aa-0.29□□□□□ -2.46
RNU6-1339P-201ENST00000363574 MAGI3Q5TCQ9 1506 aa-0.3□□□□□ -2.46
RNU6-1339P-201ENST00000363574 FLNBO75369 2602 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1339P-201ENST00000363574 REV3LO60673 3130 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 NWD1Q149M9 1564 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ACANP16112 2415 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 COL6A3P12111 3177 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 LRP1BQ9NZR2 4599 aa-0.31□□□□□ -2.46
RNU6-1339P-201ENST00000363574 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ERVK-7P63135 1459 aa-0.32□□□□□ -2.46
RNU6-1339P-201ENST00000363574 IFI6P09912 130 aa-0.32□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ZANQ9Y493 2812 aa-0.32□□□□□ -2.46
RNU6-1339P-201ENST00000363574 UMAD1C9J7I0 102 aa-0.33□□□□□ -2.46
RNU6-1339P-201ENST00000363574 DEFB121Q5J5C9 76 aa-0.33□□□□□ -2.46
RNU6-1339P-201ENST00000363574 DCAF1Q9Y4B6 1507 aa-0.33□□□□□ -2.46
RNU6-1339P-201ENST00000363574 KNL1Q8NG31 2342 aa-0.33□□□□□ -2.46
RNU6-1339P-201ENST00000363574 NESP48681 1621 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 PTPN23Q9H3S7 1636 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ARFGEF2Q9Y6D5 1785 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 H3BUT2 72 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ADAMTS12P58397 1594 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ATP5EP2Q5VTU8 51 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 TENM2Q9NT68 2774 aa-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 CNOT1A5YKK6 2376 aaKnown RBP-0.34□□□□□ -2.46
RNU6-1339P-201ENST00000363574 PCNX1Q96RV3 2341 aa-0.35□□□□□ -2.46
RNU6-1339P-201ENST00000363574 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.47
RNU6-1339P-201ENST00000363574 IFI27P40305 119 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1339P-201ENST00000363574 KRTAP6-1Q3LI64 71 aa-0.36□□□□□ -2.47
RNU6-1339P-201ENST00000363574 BVES-AS1Q5T3Y7 98 aa-0.37□□□□□ -2.47
RNU6-1339P-201ENST00000363574 LCE6AA0A183 80 aa-0.38□□□□□ -2.47
RNU6-1339P-201ENST00000363574 KDM5DQ9BY66 1539 aa-0.38□□□□□ -2.47
RNU6-1339P-201ENST00000363574 CCDC88BA6NC98 1476 aa-0.39□□□□□ -2.47
RNU6-1339P-201ENST00000363574 PRO3102Q9H379 93 aa-0.39□□□□□ -2.47
RNU6-1339P-201ENST00000363574 A0A087WXM4 84 aa-0.4□□□□□ -2.47
RNU6-1339P-201ENST00000363574 C3orf79P0CE67 100 aa-0.4□□□□□ -2.47
RNU6-1339P-201ENST00000363574 SMIM13P0DJ93 91 aa-0.4□□□□□ -2.47
RNU6-1339P-201ENST00000363574 NREPQ16612 68 aa-0.4□□□□□ -2.47
RNU6-1339P-201ENST00000363574 MUC2Q02817 5179 aa-0.41□□□□□ -2.47
RNU6-1339P-201ENST00000363574 ABCC1P33527 1531 aa-0.41□□□□□ -2.48
RNU6-1339P-201ENST00000363574 PCLOQ9Y6V0 5065 aa-0.42□□□□□ -2.48
RNU6-1339P-201ENST00000363574 LINC00158P58513 81 aa-0.42□□□□□ -2.48
RNU6-1339P-201ENST00000363574 WIZO95785 1651 aa-0.43□□□□□ -2.48
RNU6-1339P-201ENST00000363574 H0YGG7 62 aa-0.43□□□□□ -2.48
RNU6-1339P-201ENST00000363574 NDUFA4O00483 81 aa-0.43□□□□□ -2.48
RNU6-1339P-201ENST00000363574 KRTAP6-2Q3LI66 62 aa-0.43□□□□□ -2.48
RNU6-1339P-201ENST00000363574 SCN11AQ9UI33 1791 aa-0.43□□□□□ -2.48
RNU6-1339P-201ENST00000363574 PLXNC1O60486 1568 aa-0.44□□□□□ -2.48
RNU6-1339P-201ENST00000363574 CFAP74Q9C0B2 1584 aa-0.44□□□□□ -2.48
RNU6-1339P-201ENST00000363574 SPRR2AP35326 72 aa-0.44□□□□□ -2.48
RNU6-1339P-201ENST00000363574 TRANK1O15050 2925 aa-0.45□□□□□ -2.48
RNU6-1339P-201ENST00000363574 CFAP43Q8NDM7 1665 aa-0.45□□□□□ -2.48
RNU6-1339P-201ENST00000363574 PLCH1Q4KWH8 1693 aa-0.46□□□□□ -2.48
RNU6-1339P-201ENST00000363574 HMGA1P17096 107 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1339P-201ENST00000363574 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1339P-201ENST00000363574 KMT2CQ8NEZ4 4911 aaKnown RBP-0.47□□□□□ -2.48
RNU6-1339P-201ENST00000363574 AKAP13Q12802 2813 aa-0.47□□□□□ -2.48
RNU6-1339P-201ENST00000363574 H0YAA0 97 aa-0.47□□□□□ -2.48
RNU6-1339P-201ENST00000363574 C18orf32Q8TCD1 76 aa-0.47□□□□□ -2.48
RNU6-1339P-201ENST00000363574 PDE4DIPQ5VU43 2346 aa-0.47□□□□□ -2.48
RNU6-1339P-201ENST00000363574 SRRM2Q9UQ35 2752 aaKnown RBP-0.47□□□□□ -2.49
RNU6-1339P-201ENST00000363574 SVEP1Q4LDE5 3571 aa-0.48□□□□□ -2.49
RNU6-1339P-201ENST00000363574 DDX60LQ5H9U9 1706 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1339P-201ENST00000363574 RICTORQ6R327 1708 aa-0.49□□□□□ -2.49
RNU6-1339P-201ENST00000363574 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
RNU6-1339P-201ENST00000363574 RRBP1Q9P2E9 1410 aaKnown RBP-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms