RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 KRTAP10-2P60368 255 aa2.56□□□□□ -2
RNU6-249P-201ENST00000363016 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
RNU6-249P-201ENST00000363016 KRTAP1-4P0C5Y4 121 aa2.55□□□□□ -2
RNU6-249P-201ENST00000363016 ICE1Q9Y2F5 2266 aa2.54□□□□□ -2
RNU6-249P-201ENST00000363016 USF3Q68DE3 2245 aa2.54□□□□□ -2
RNU6-249P-201ENST00000363016 DEFB104AQ8WTQ1 72 aa2.54□□□□□ -2
RNU6-249P-201ENST00000363016 ATRXP46100 2492 aa2.54□□□□□ -2
RNU6-249P-201ENST00000363016 A8MTW9 85 aa2.53□□□□□ -2
RNU6-249P-201ENST00000363016 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
RNU6-249P-201ENST00000363016 MT3P25713 68 aa2.51□□□□□ -2.01
RNU6-249P-201ENST00000363016 KRTAP10-9P60411 292 aa2.51□□□□□ -2.01
RNU6-249P-201ENST00000363016 LELP1Q5T871 98 aa2.51□□□□□ -2.01
RNU6-249P-201ENST00000363016 DEFB105AQ8NG35 78 aa2.51□□□□□ -2.01
RNU6-249P-201ENST00000363016 PRO0255Q9UI72 69 aa2.51□□□□□ -2.01
RNU6-249P-201ENST00000363016 ASCC3Q8N3C0 2202 aaKnown RBP2.5□□□□□ -2.01
RNU6-249P-201ENST00000363016 K7EIL1 84 aa2.5□□□□□ -2.01
RNU6-249P-201ENST00000363016 CLPSL2Q6UWE3 100 aa2.5□□□□□ -2.01
RNU6-249P-201ENST00000363016 APLNQ9ULZ1 77 aa2.5□□□□□ -2.01
RNU6-249P-201ENST00000363016 TRIOBPQ9H2D6 2365 aa2.5□□□□□ -2.01
RNU6-249P-201ENST00000363016 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
RNU6-249P-201ENST00000363016 CACNA1BQ00975 2339 aa2.48□□□□□ -2.01
RNU6-249P-201ENST00000363016 PRLHP81277 87 aa2.48□□□□□ -2.01
RNU6-249P-201ENST00000363016 PIEZO2Q9H5I5 2752 aa2.47□□□□□ -2.01
RNU6-249P-201ENST00000363016 DEFB103AP81534 67 aa2.47□□□□□ -2.01
RNU6-249P-201ENST00000363016 KRTAP13-3Q3SY46 172 aa2.47□□□□□ -2.01
RNU6-249P-201ENST00000363016 CNTRLQ7Z7A1 2325 aa2.46□□□□□ -2.02
RNU6-249P-201ENST00000363016 A0A1B0GVY2 172 aa2.45□□□□□ -2.02
RNU6-249P-201ENST00000363016 SPRR1AP35321 89 aa2.45□□□□□ -2.02
RNU6-249P-201ENST00000363016 COL6A6A6NMZ7 2263 aa2.45□□□□□ -2.02
RNU6-249P-201ENST00000363016 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
RNU6-249P-201ENST00000363016 Q5VSD8 79 aa2.44□□□□□ -2.02
RNU6-249P-201ENST00000363016 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
RNU6-249P-201ENST00000363016 FAM208BQ5VWN6 2430 aa2.44□□□□□ -2.02
RNU6-249P-201ENST00000363016 PLCE1Q9P212 2302 aa2.43□□□□□ -2.02
RNU6-249P-201ENST00000363016 TPRP12270 2363 aaKnown RBP2.43□□□□□ -2.02
RNU6-249P-201ENST00000363016 WNK2Q9Y3S1 2297 aa2.42□□□□□ -2.02
RNU6-249P-201ENST00000363016 KLK9Q2XQG4 91 aa2.42□□□□□ -2.02
RNU6-249P-201ENST00000363016 NOP10Q9NPE3 64 aaKnown RBP2.42□□□□□ -2.02
RNU6-249P-201ENST00000363016 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
RNU6-249P-201ENST00000363016 STATHP02808 62 aa2.4□□□□□ -2.03
RNU6-249P-201ENST00000363016 KRTAP10-11P60412 298 aa2.4□□□□□ -2.03
RNU6-249P-201ENST00000363016 S4R3F8 94 aa2.4□□□□□ -2.03
RNU6-249P-201ENST00000363016 NAV3Q8IVL0 2385 aa2.39□□□□□ -2.03
RNU6-249P-201ENST00000363016 OTOGLQ3ZCN5 2332 aa2.38□□□□□ -2.03
RNU6-249P-201ENST00000363016 H0YGG7 62 aa2.37□□□□□ -2.03
RNU6-249P-201ENST00000363016 SPRR1BP22528 89 aa2.37□□□□□ -2.03
RNU6-249P-201ENST00000363016 SPINK1P00995 79 aa2.36□□□□□ -2.03
RNU6-249P-201ENST00000363016 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
RNU6-249P-201ENST00000363016 IGF2RP11717 2491 aa2.36□□□□□ -2.03
RNU6-249P-201ENST00000363016 ZDBF2Q9HCK1 2354 aa2.36□□□□□ -2.03
RNU6-249P-201ENST00000363016 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
RNU6-249P-201ENST00000363016 APELAP0DMC3 54 aa2.35□□□□□ -2.03
RNU6-249P-201ENST00000363016 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
RNU6-249P-201ENST00000363016 COX14Q96I36 57 aa2.34□□□□□ -2.03
RNU6-249P-201ENST00000363016 CACNA1GO43497 2377 aa2.31□□□□□ -2.04
RNU6-249P-201ENST00000363016 DEFB119Q8N690 84 aa2.31□□□□□ -2.04
RNU6-249P-201ENST00000363016 PCNX1Q96RV3 2341 aa2.31□□□□□ -2.04
RNU6-249P-201ENST00000363016 A0A0C4DFX4 3053 aa2.3□□□□□ -2.04
RNU6-249P-201ENST00000363016 PTPRZ1P23471 2315 aaPredicted RBP2.29□□□□□ -2.04
RNU6-249P-201ENST00000363016 BAHCC1Q9P281 2608 aa2.28□□□□□ -2.04
RNU6-249P-201ENST00000363016 ZNF462Q96JM2 2506 aa2.28□□□□□ -2.04
RNU6-249P-201ENST00000363016 H3BUX3 64 aa2.28□□□□□ -2.04
RNU6-249P-201ENST00000363016 KRTAP10-3P60369 221 aa2.28□□□□□ -2.04
RNU6-249P-201ENST00000363016 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
RNU6-249P-201ENST00000363016 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
RNU6-249P-201ENST00000363016 PKDREJQ9NTG1 2253 aa2.27□□□□□ -2.05
RNU6-249P-201ENST00000363016 A0A0D9SG42 100 aa2.26□□□□□ -2.05
RNU6-249P-201ENST00000363016 RHPN1-AS1Q9BWJ2 59 aa2.25□□□□□ -2.05
RNU6-249P-201ENST00000363016 ROS1P08922 2347 aa2.24□□□□□ -2.05
RNU6-249P-201ENST00000363016 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
RNU6-249P-201ENST00000363016 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
RNU6-249P-201ENST00000363016 WNK1Q9H4A3 2382 aa2.21□□□□□ -2.06
RNU6-249P-201ENST00000363016 HTN1P15515 57 aa2.21□□□□□ -2.06
RNU6-249P-201ENST00000363016 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
RNU6-249P-201ENST00000363016 DSPP15924 2871 aaKnown RBP2.2□□□□□ -2.06
RNU6-249P-201ENST00000363016 CHD7Q9P2D1 2997 aa2.2□□□□□ -2.06
RNU6-249P-201ENST00000363016 DEFB1P60022 68 aa2.2□□□□□ -2.06
RNU6-249P-201ENST00000363016 REV3LO60673 3130 aa2.19□□□□□ -2.06
RNU6-249P-201ENST00000363016 KRTAP10-6P60371 365 aaPredicted RBP2.19□□□□□ -2.06
RNU6-249P-201ENST00000363016 AKAP6Q13023 2319 aa2.18□□□□□ -2.06
RNU6-249P-201ENST00000363016 HIVEP2P31629 2446 aa2.17□□□□□ -2.06
RNU6-249P-201ENST00000363016 KRTAP9-6A0A140TA67 174 aa2.17□□□□□ -2.06
RNU6-249P-201ENST00000363016 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
RNU6-249P-201ENST00000363016 M0QZ58 72 aa2.17□□□□□ -2.06
RNU6-249P-201ENST00000363016 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
RNU6-249P-201ENST00000363016 CSPG4Q6UVK1 2322 aa2.16□□□□□ -2.06
RNU6-249P-201ENST00000363016 TRANK1O15050 2925 aa2.14□□□□□ -2.07
RNU6-249P-201ENST00000363016 DEFB110Q30KQ9 67 aa2.14□□□□□ -2.07
RNU6-249P-201ENST00000363016 DEFB108BQ8NET1 73 aa2.14□□□□□ -2.07
RNU6-249P-201ENST00000363016 MGAQ8IWI9 3026 aa2.14□□□□□ -2.07
RNU6-249P-201ENST00000363016 SPTBN1Q01082 2364 aaKnown RBP2.14□□□□□ -2.07
RNU6-249P-201ENST00000363016 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
RNU6-249P-201ENST00000363016 FBN1P35555 2871 aaKnown RBP2.13□□□□□ -2.07
RNU6-249P-201ENST00000363016 KRTAP1-5Q9BYS1 174 aa2.12□□□□□ -2.07
RNU6-249P-201ENST00000363016 SPTBN2O15020 2390 aa2.1□□□□□ -2.07
RNU6-249P-201ENST00000363016 C2CD3Q4AC94 2353 aa2.1□□□□□ -2.07
RNU6-249P-201ENST00000363016 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
RNU6-249P-201ENST00000363016 ABCA2Q9BZC7 2435 aa2.09□□□□□ -2.07
RNU6-249P-201ENST00000363016 TENM2Q9NT68 2774 aa2.09□□□□□ -2.07
RNU6-249P-201ENST00000363016 CELSR2Q9HCU4 2923 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms